Lsal009571.1
Basic Information
- Insect
- Leucoma salicis
- Gene Symbol
- JARID2
- Assembly
- GCA_948253155.1
- Location
- OX411803.1:1303306-1314932[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 9.1e-20 3.1e-16 60.3 0.0 20 89 349 416 332 416 0.88
Sequence Information
- Coding Sequence
- ATGTGTAATGGCAACGGTCAAATAAACTACTATAGCGAACAAGGTATCTATCGCTGGATTGACGGCTCACTGTCCTTGAAAGGTCAGCCGTCAATTGATGAGTCAGACACAGTCTTGGTGGACGAGGATGAAGTAAAAGAGGAATGTGATATCTATGAATGTCCGTCGCTTGCTTGGCGGACTGTCAATGACGTAGTTACATTGTCTAAGGCTGATTATGAAACGATGTGTAAGAGTTGTATAAGTTGTTTCCGAATCAAAAAATTTGAAAAGATTTGTCTGTTGCTGAAAAATGCAATCAACATGCAAGATAATATGGAACAAGTGACAGATACCCAACCTCTAGACTGGAATCCTATACGTATCGAGAGAGAGTTGCACACAAACAGAACAGTTGCCAACAATAACATTATGTATGTGGAGATGTTGCCCCGACATCCTCATTTAATGATCAAGATAATCCATGTGTTTAATACTCTGAATAATTCAGTAAATGCATGTGTCGTCCCGAGGTCCAAAGCCGAAGTCAGCATTGATTTTTCATTTGTCGATCATGAATTTCTTGCTGACAAACTCTTAGAGGTCATGCCGTCCCAAATTCCAGTTCCAGATTGTCCTAAGATAGAATCAAAACAATCAATCCGAGAAGAAGCTCTGGTAGATCCAGGCGATGTGGAAGTAATACCAGTAGCGGGCCCATCGGGGACTTGTAAACTTAATAGCATGATGAATGCGGAGCTTGCTTTTGACGATGATGATACAGATGCCAATAACGAAGGCAAAATATTAAAAGTTCCTACTTTCTATCCAACTCCGGAAGAGTTAACCGATCCAATGGCGTATTTCGAGAAAATCAAACAGGAAGTTTCAGAATATGGTATCTGCAAAATCGTGCCAGCTACTGGTTTTGCACCAAAGTGCAAAATTGACGATAGCGTCAAATTTGAGATATCGAAGCAGTACATATCGCGCCTGTATAATAGATGGGGGTCGTTAGTTCGAGAGCTGTGCGCTATAAGGACCTGCTTGGGGGCTCAACATCTATACGGCATGAGGCCACCAGTGATTGACGGAATTGAAGTGAATTTACCGAAGCTATATCATCTAGTACAAAGATATGGCGGTTTAGAAAACGTTATTAACAAGAACAAATGGGGCAAGGTCGCCGACGATATGAATCTGAACAAAGGTCCGTCCACTGAGAAAAAGTTGGACCAAATATACGTAACATACTTGTTACCTTATGATACTCTGACGCCGTCTGAACGCCAAGAAATTTTTGTGAAGGTAGAGAAATCTTGGAATAAGCGAAATAACAAAATGCTAGAGCACGCAAACAACCCGTTGCACAGGCAGAAATATTTGCTCGGTGAATCGGAATCGTCTTCAGAGGAAAGCGATAATGATGCTACGAAAGACGCTGAAGACTGCGTGGTACCAGGACAAATTATGAACTTGGGGAAGTTTAAAAGAGTGGCGAAGAATGCCCAGCACCAATTCTTCCGACACAAATCAACTCCTTTAACCCAAATTGAAGACGAATATTGGCGTATAGTGATGCTGGGCACTGAGCATATCTGTGTGAACACAGCCTCCATTGACACTGGAGAACAAGGCCTCGGTTTTTCTACCAACAGAAATGATTCATTTAGTGATCACGCTTGGAACCTGAAGGTTCTGACCCAAAATAAATCAAATATTTTAAGATCGCTTGGTCCTACCCTAGGGGTGACCGTACCCACAATTCATGTGGGTATGATATTTTCAACTAGTTGCTGGCACAGAGACCCGCACGCTGTACCCTGGATAGAGTTCTCTCACATGGGACCTGCCAAAATATGGTATAGTGTCCCAGAAAAGGAAGATGCAAAATTCCGCGCTGCTGCAAAAGCTTTGAGTCCAACGTCCTGCCAAAACAAGGACCTCTGGTTGTCATCAGATATCTCCATGATTCCACCAAACTTACTCTGCCAACACAATGTGAAAGTCTATCGTGTGGAACAAAACCCTGGGGAGTTTGTTCTGGTGATGCCTAGGGCCTATTCCTGCTCTATCAGCACCGGGTATACGGTTTCTGAGAGTGTGTACTTTGCCACAGAGACCTTGCTAGAAGGGCTTATAAATGCTTTCGAAGAGATCAGAACATCCTGCGAACCTACAATGTTCGCACTAGAACACCTATTAAAGGGGATAGTAGAAGACAAACAGACACCGCCATCGGTTCTGAAAAAGGTGCAGCCGGTATTGGGGTATATCTACCAACAAGAGATTGAGCGTAGGAAGATGCTGGAGACGAAACTAGTCTGCGTCGTGAATCCTGGTACAGGGGAGGGACTGTCTACATCCAGGGGAAATATAAGCCAGAACTCAACATCCGGACCCTCCGTGTGGAATGTTAGAGACCAAGATGAGTGTGAAATGTGTCGGTGCACGCTCTATCTATCTAAGGTGAAAAATATACACCAGAACACTTACCTGTGCCTGGAGCACACCCTCAAATTGCTGAACAAAAAGAGGAATCAGACTGTAAGCTCACAGGATTTTCAAGCCAATTATATCATTCCAACTAGTGAATTGTCAAATACTCTTCGCGAGCTTCGCGAAAGTCTCGAACGTCTCAATGGTGACGAACAGGTAGCATCGTCAGACCCCTGCTCATCATTCCAAGTGCAGTAA
- Protein Sequence
- MCNGNGQINYYSEQGIYRWIDGSLSLKGQPSIDESDTVLVDEDEVKEECDIYECPSLAWRTVNDVVTLSKADYETMCKSCISCFRIKKFEKICLLLKNAINMQDNMEQVTDTQPLDWNPIRIERELHTNRTVANNNIMYVEMLPRHPHLMIKIIHVFNTLNNSVNACVVPRSKAEVSIDFSFVDHEFLADKLLEVMPSQIPVPDCPKIESKQSIREEALVDPGDVEVIPVAGPSGTCKLNSMMNAELAFDDDDTDANNEGKILKVPTFYPTPEELTDPMAYFEKIKQEVSEYGICKIVPATGFAPKCKIDDSVKFEISKQYISRLYNRWGSLVRELCAIRTCLGAQHLYGMRPPVIDGIEVNLPKLYHLVQRYGGLENVINKNKWGKVADDMNLNKGPSTEKKLDQIYVTYLLPYDTLTPSERQEIFVKVEKSWNKRNNKMLEHANNPLHRQKYLLGESESSSEESDNDATKDAEDCVVPGQIMNLGKFKRVAKNAQHQFFRHKSTPLTQIEDEYWRIVMLGTEHICVNTASIDTGEQGLGFSTNRNDSFSDHAWNLKVLTQNKSNILRSLGPTLGVTVPTIHVGMIFSTSCWHRDPHAVPWIEFSHMGPAKIWYSVPEKEDAKFRAAAKALSPTSCQNKDLWLSSDISMIPPNLLCQHNVKVYRVEQNPGEFVLVMPRAYSCSISTGYTVSESVYFATETLLEGLINAFEEIRTSCEPTMFALEHLLKGIVEDKQTPPSVLKKVQPVLGYIYQQEIERRKMLETKLVCVVNPGTGEGLSTSRGNISQNSTSGPSVWNVRDQDECEMCRCTLYLSKVKNIHQNTYLCLEHTLKLLNKKRNQTVSSQDFQANYIIPTSELSNTLRELRESLERLNGDEQVASSDPCSSFQVQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -