Lcom031634.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Leucania comma
Gene Symbol
nfxl1
Assembly
GCA_958295575.1
Location
OY282485.1:3010597-3013077[+]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 20 1 4.1e+04 -7.8 5.6 15 19 134 138 133 138 0.81
2 20 0.0053 2.2e+02 3.2 0.3 4 10 169 175 168 176 0.97
3 20 1.6e-07 0.0064 17.6 15.9 3 19 186 202 185 202 0.95
4 20 0.79 3.3e+04 -3.8 0.6 6 10 227 231 226 231 0.78
5 20 1.3e-08 0.00055 21.1 11.1 4 19 240 255 237 255 0.92
6 20 0.84 3.5e+04 -3.9 1.9 6 10 280 284 279 284 0.83
7 20 8.2e-10 3.4e-05 24.9 12.5 1 19 290 308 290 308 0.99
8 20 4e-06 0.16 13.2 19.3 3 19 345 361 337 361 0.88
9 20 0.62 2.6e+04 -3.4 0.4 7 11 365 369 365 369 0.84
10 20 1 4.1e+04 -5.3 2.2 5 10 384 389 384 389 0.88
11 20 3.3e-05 1.4 10.2 20.3 1 18 395 412 395 413 0.97
12 20 2.2e-10 9.3e-06 26.7 14.0 1 19 422 440 422 440 0.99
13 20 0.0001 4.2 8.6 6.4 9 19 488 498 486 498 0.89
14 20 0.0026 1.1e+02 4.2 7.5 3 12 509 518 508 518 0.92
15 20 0.2 8.4e+03 -1.9 3.4 14 18 547 551 547 552 0.85
16 20 0.051 2.1e+03 0.0 0.7 7 12 567 572 567 578 0.85
17 20 2.7e-06 0.11 13.7 4.8 1 11 588 598 588 599 0.97
18 20 0.34 1.4e+04 -2.6 1.5 15 18 613 616 612 617 0.82
19 20 7.9e-05 3.3 9.0 12.9 4 18 630 645 628 646 0.86
20 20 2.6e-06 0.11 13.7 12.9 1 18 687 705 687 706 0.89

Sequence Information

Coding Sequence
ATGGCGCGCCGATACAGAGACGCTGCCGCAAAATTGCAGCAAAACGTCCAAAAACATCTAAAAGAAATGAAAGAACTGTCGTCGTCTGAAGATGAGGACCCTTGCGAGTCCAGCGTCTTGGAAACCATGTTCCAAAGTTACTGGCGAGGCGGTGGAGACACTCAGATGTTGAACCGGACCAAAAACCTCCTAGAAGAAGCGATGAGTGGCCGCTCAGTAACTTGTCTCATATGCATATCGTCGATCAAAAAATCTCACGCTATTTGGACTTGTGATCATTGCTTTGCCTATTTCCATCTCTCTTGCATCCAAAAATGGTCGAACGACAGCATAAGCTTGCGTAGTGAAGAAAGTACGGGCCCGATAGCTGTGATAAAACAACAGAAGATCGAGTGGTGCTGCCCCAAGTGTCGAAACTCTTATTCTAAGGAAGAAATACCTCGGAAATATCGTTGCTTCTGCGGCAAAACTGATGACCCACCGCACCATCCTTGGCTCATTCCTCATACCTGTGGTGAAGTCTGTGGAAAGAGGTTGTCTACTGGTGATAACTGTAAACATAAGTGCTTGCTTCTATGCCATCCTGGTCCTTGCCCTCCATGTCCACAAACTGTTAATGGGATATGTTTCTGTGAGAAGGAACGTAAGAGAGTCAGATGCAGTGCTGCCACATGGTCCTGTGGGCAGGTTTGTAAGAAAACTCTTTTATGTAAGGCTCATTATTGTAAAGATGTCTGTCATTCTGGTGATTGTCCACCATGCAGCTACACAAGTATTCAGCCATGTCAATGTGGTGCTGAGAAAGCTAAAAGGCCATGCAATGATCCATTCTGGCAGTGCAAGAAGCCATGTAACAAATTATTTTCATGTGGCTATCATAAATGTGAGAGAATCTGTCACTCTGGTAACTGCGGAGACTGTCCCAATTCTGGAACTTTATCATGTCCTTGTGGAGCTAACCAGCGTTTTGTCCAATGTCCAGATGTAATGGAAACCTGCCTAGGCACATGTGGTAAAAGACATGAAGGTTGTGATCACAAATGTCCAGAAAAATGTCACAATGGTAACTGTCCACCTTGCCAAGTTCTAATTGAAAAGAAATGTCACTGCTCAACCCATACAAGGTCTTTACCATGTAGCAAAGACTTCAAATGTGAAACTAAATGTAGAGGAATAAGACTGTGCGGCAAACATGGTTGTGGAAGAAAATGCTGTAATGGAAACTGCCCTCCGTGTGAGAAAATATGTGACAAAGGCCTCCAATGTGGCCGGCACAAATGCACAAATATCTGTCATCGGGGACCTTGTTATCCATGCCCTTTAGAATCGAAAGTGACCTGCAGATGCAAAGAGACTTATGTAAGAGTTCCATGTGGAAGGGAACGGCAGACTAAACCTCCGAAATGCAACTTGCcatgcaaaataaaatacaaatgtgGGCATAGTGAAGAAAATAAGCACTCCTGTCATTTTGGAGATTGCCCCCCTTGCAAAGCAATCTGTGACAAACAGTATCCAAATTGTAATCACCAATGTAAAGCAGTATGTCATGAATATGTTGCTGTGCTGTTTAAACAGGTTGAGAAACCTGCTACACCGTGGGAAGTGCAGCCACCGAAGACCAAAATAATGACCTTAGAATGTCCACCATGTGACGCACCAGTACCAATAGTTTGTTTTGGGGAGCATGAGACAGACCAGCAACCATGCCACAAAGCCTCCAGGAGGCCTTGTGGCAGAGATTGTGGAAAACCATTGGCTTGCGGAAATCATAAATGCTCTTTACTCTGTCATTTGTATAGACCTGATCCTATGTACCCGAATGTGCCTTCGAGTTGTAAGCCATGCAACAGAGAATGTTCAGTTCAGCGTCCTCCGAAATGTGCTCATAAATGTTCCATAAGGGCTTGTCACCCTGGTCCATGCAGCCCGTGTGAGATACTGGAACGGCTAGCATGTCATTGTGGTGTGACAGAAATTTACCTGCGTTGTCGAGAATTGTCAACAGCTACAGAAGAGATGTTATCATGCAAGCAACAATGTCCTAAGAACTTAGACTGCGGTCACCGCTGCCGTAACACTTGCCACTCGGGACAATGCGGCAACCAAGTTTGCACTAAAAAAACTAAAGTGCACTGTCCCTGCGGTAACATAAAGAAGGAGGCTCCATGTAACTCTGTTAGAACCGGAGAGACAAAGATTATGTGTGATGAAACCTGTGAAGCTAAGAAAAAGGCAGCTAAAATAGAGCAAGAGAAAGAGAAACAGAGATTGAAAGAATTAGAAGAGGAGAAGAATCGTAAAGAGTTAGCAGAGTATGAGTGGAAACTAAGCGGTAAGAAGAAGAAATACAAGGAAAAGAAGATGGTGGTTGGTAAAGATGACCGTGGTTTCCTGAAGAGGTATTGGGTTCCGATATCATCGTTCCTAGTTATGATCCTAGcctctttttattatatattttatgtaggaTTGGAATAG
Protein Sequence
MARRYRDAAAKLQQNVQKHLKEMKELSSSEDEDPCESSVLETMFQSYWRGGGDTQMLNRTKNLLEEAMSGRSVTCLICISSIKKSHAIWTCDHCFAYFHLSCIQKWSNDSISLRSEESTGPIAVIKQQKIEWCCPKCRNSYSKEEIPRKYRCFCGKTDDPPHHPWLIPHTCGEVCGKRLSTGDNCKHKCLLLCHPGPCPPCPQTVNGICFCEKERKRVRCSAATWSCGQVCKKTLLCKAHYCKDVCHSGDCPPCSYTSIQPCQCGAEKAKRPCNDPFWQCKKPCNKLFSCGYHKCERICHSGNCGDCPNSGTLSCPCGANQRFVQCPDVMETCLGTCGKRHEGCDHKCPEKCHNGNCPPCQVLIEKKCHCSTHTRSLPCSKDFKCETKCRGIRLCGKHGCGRKCCNGNCPPCEKICDKGLQCGRHKCTNICHRGPCYPCPLESKVTCRCKETYVRVPCGRERQTKPPKCNLPCKIKYKCGHSEENKHSCHFGDCPPCKAICDKQYPNCNHQCKAVCHEYVAVLFKQVEKPATPWEVQPPKTKIMTLECPPCDAPVPIVCFGEHETDQQPCHKASRRPCGRDCGKPLACGNHKCSLLCHLYRPDPMYPNVPSSCKPCNRECSVQRPPKCAHKCSIRACHPGPCSPCEILERLACHCGVTEIYLRCRELSTATEEMLSCKQQCPKNLDCGHRCRNTCHSGQCGNQVCTKKTKVHCPCGNIKKEAPCNSVRTGETKIMCDETCEAKKKAAKIEQEKEKQRLKELEEEKNRKELAEYEWKLSGKKKKYKEKKMVVGKDDRGFLKRYWVPISSFLVMILASFYYIFYVGLE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00932106;
90% Identity
iTF_01440670;
80% Identity
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