Lcom007812.2
Basic Information
- Insect
- Leucania comma
- Gene Symbol
- GATA-B
- Assembly
- GCA_958295575.1
- Location
- OY282464.1:283980-295061[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.6e-18 3.5e-14 53.3 3.9 1 34 162 194 162 196 0.97 2 2 1.7e-17 7.7e-14 52.2 7.2 1 34 229 261 229 263 0.97
Sequence Information
- Coding Sequence
- ATGCGTGAGTCAGTGGAGTTGGTTGTAAGACGCGACCAGCCGAGTGGCGGCGGAGGGGGCGGCGGAGCGGTGTACTCGCGCTGCACGTACGCCGCCGGCTCGCCGTACTTCGGCAACGGCACCGAGATCACTACGCAGCCGCAGATCTGGACCTCCAGCGCAGGCGGCTCCCCACAgtacggcggcggcggcgtggtGTTGGGTGAGGAGTACGCGGAGGCAGGCGCGGAAGCGGCGGGCGCGgggggcggcggcgcgggcgctggCGGCGGCTCGCTACCGGCGTTCAGCGCTCGCTTCGGCGGCGCTTTCGCGTGCGCTACGTCGCGCCCCAACCCCGTATATGGCGCAGGTGCGCTCACCGCGCAACCCTACTCGCACCAGGAGGTGTGGAACTTGGAAAGCAATCGTCGTCCACAGATGTCCGCTTCCGCCAGTCTCTCTGCCATCGACATGGCGGAGTTTTTCACGGAGGGGCGCGAGTGCGTGAACTGCGGCGCCATCCACACGCCGCTGTGGCGCCGCGACGGCACCGGCCACTACCTGTGCAACGCGTGCGGCCTCTACAACAAGATGAACGGCATGAACCGGCCGCTGAAGCAGCCGCGGCGGCTGGTACGTCAGCGCCTCGCCGCGCCCCACGCGCCCCCGCACGACATGGGCACGAAGCGGCCGGGCATGTCGTGCACCAACTGCCAGACCACGACGACGTCGCTGTGGCGCCGCAACTCGCTCGGCGAGACCGTTTGCAACGCGTGCGGCCTCTACTACAAGCTGCACAACATCAACCGCCCGCTGGCCATGAAGAAGGACTCCATCCAGaCAAGAAAACGGAAACCCAAAAATAGCATAAAAGCGGAACGTAATATAAAGGCAGCCGTCCAGCGCACCGTCACGTCGGGCGTCAAGATCGAGAACTTGCTGGAGAGCGGGTCGGGCGCGACGGGCGGCGCGCGCTCGCCGCTGGCGCTCAACTACTACGTGCAGCACGCGCTCAAGGTGGAGGAGCCGCCGCCGGCGCACGCCGCGCACGCGCACGCCGCGGCGCACCACCACGCGCACGCCGCGCACGGCCACGCCGCGCACCAGCTCTACGACGACGAGTACCGGCGCGCCGCCGAGGACAGGCTGGAGCGGCCCACCGTCGTGTCCATGGGCAGCTGA
- Protein Sequence
- MRESVELVVRRDQPSGGGGGGGAVYSRCTYAAGSPYFGNGTEITTQPQIWTSSAGGSPQYGGGGVVLGEEYAEAGAEAAGAGGGGAGAGGGSLPAFSARFGGAFACATSRPNPVYGAGALTAQPYSHQEVWNLESNRRPQMSASASLSAIDMAEFFTEGRECVNCGAIHTPLWRRDGTGHYLCNACGLYNKMNGMNRPLKQPRRLVRQRLAAPHAPPHDMGTKRPGMSCTNCQTTTTSLWRRNSLGETVCNACGLYYKLHNINRPLAMKKDSIQTRKRKPKNSIKAERNIKAAVQRTVTSGVKIENLLESGSGATGGARSPLALNYYVQHALKVEEPPPAHAAHAHAAAHHHAHAAHGHAAHQLYDDEYRRAAEDRLERPTVVSMGS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01526678;
- 90% Identity
- iTF_00038349;
- 80% Identity
- -