Basic Information

Insect: Leucania comma
Gene Symbol: ZNF296
Assembly: GCA_958295575.1
Location: OY282492.1:10861924-10873940[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.26 28 6.6 0.4 3 23 124 144 122 144 0.97

2 15 0.0023 0.25 13.0 2.8 1 23 317 339 317 339 0.99

3 15 3.6e-05 0.0038 18.7 0.4 1 23 345 368 345 368 0.97

4 15 0.0045 0.48 12.1 1.6 1 23 373 396 373 396 0.94

5 15 0.00029 0.031 15.9 1.5 2 23 573 594 572 594 0.97

6 15 0.00017 0.018 16.6 3.2 1 23 600 622 600 622 0.98

7 15 1.3 1.4e+02 4.4 5.1 1 23 691 713 684 713 0.97

8 15 0.016 1.7 10.4 0.3 2 23 721 742 720 742 0.97

9 15 0.021 2.2 10.0 1.9 1 23 748 770 748 770 0.96

10 15 0.0023 0.24 13.1 1.7 1 23 776 798 776 798 0.98

11 15 0.002 0.21 13.3 5.0 1 23 807 829 807 829 0.99

12 15 0.0066 0.71 11.6 2.1 2 23 875 896 875 896 0.97

13 15 0.0084 0.9 11.3 3.8 1 23 913 935 913 935 0.96

14 15 2e-06 0.00021 22.7 0.7 1 23 941 963 941 963 0.98

15 15 6.8e-07 7.3e-05 24.2 3.1 1 23 969 992 969 992 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.26	28	6.6	0.4	3	23	124	144	122	144	0.97
2	15	0.0023	0.25	13.0	2.8	1	23	317	339	317	339	0.99
3	15	3.6e-05	0.0038	18.7	0.4	1	23	345	368	345	368	0.97
4	15	0.0045	0.48	12.1	1.6	1	23	373	396	373	396	0.94
5	15	0.00029	0.031	15.9	1.5	2	23	573	594	572	594	0.97
6	15	0.00017	0.018	16.6	3.2	1	23	600	622	600	622	0.98
7	15	1.3	1.4e+02	4.4	5.1	1	23	691	713	684	713	0.97
8	15	0.016	1.7	10.4	0.3	2	23	721	742	720	742	0.97
9	15	0.021	2.2	10.0	1.9	1	23	748	770	748	770	0.96
10	15	0.0023	0.24	13.1	1.7	1	23	776	798	776	798	0.98
11	15	0.002	0.21	13.3	5.0	1	23	807	829	807	829	0.99
12	15	0.0066	0.71	11.6	2.1	2	23	875	896	875	896	0.97
13	15	0.0084	0.9	11.3	3.8	1	23	913	935	913	935	0.96
14	15	2e-06	0.00021	22.7	0.7	1	23	941	963	941	963	0.98
15	15	6.8e-07	7.3e-05	24.2	3.1	1	23	969	992	969	992	0.98

Sequence Information

Coding Sequence: ATGAACCACGCAACCGCAATGCCAGGGAACATGGACGTTGATCCGCTGAGCTCATACGAGTACCCGGCGTACGATAGCTACGCGGCACAGACGTACCCGTACCCCAGCAAGTTGCAGCAATCCATCTACCAGGCTTATCAGCAGACTCAACCTAACTACATGACCAACCCACAACCACAGGAACCATACAGCAACCCTCAGCCAGCGTTACCAACACAGCAAACCATAGAACCTGGAATTGCTCCTAAAACTGAAACACAGGAAACAGAATCAAAACCAGTTTTAAAAAGGAGAAGAAAGGAGAAAAATGggcaaaaaagtacttattgttCGGAAAAAATCAGGGATGCTACATTCAAGTTCTACGGCTGTTCCGTCTGTAACATAAGCTACAATGCTCTGCATGAGCTAGACCAACATGTGACCACGCACAAGAACAGGATGACGAGCTACAGGCTCCGGCtaagaaatcaaataaaaaagaaacagattaaaaaagaaaagaaaaagttaaaaaagatgGTGAAAATTAAGAAAGAAATTGACATAGAAATCAAACCTGAAGACGGTTATATAGGAGAAGAGAAAGCTGCTGATTTTATGAGTAATGGAATCAATCCTACTACGGAACTTAATAACGGAATGATTCCTAATGCTGAATTTAATGGAATCAATCCTAATATGGAACTTAATGGGAGTGTCAATAATGAGATATCTAATCCTGAGTGTAATGGACTAATAGAAAATAGAAATAGTGAAAATAGTGCAGTAGACATACAAAATAGTCAAAATCAAACCGTTAATGACTTGAATTCTATAAGCAATAATCCTCAGGGTAATGAAACTAGTTCCTTGACTATTGGAAGCAGTGAAGGAGAGAATGCCAATGTGAGTAAAGACAAAGAGAATAACCTGGACGAGGTGGAGTTGACTAATTTAGAGAAAATTTACAAATGTTTTGCGTGCCAGAAACAATTTACATTGAGCTATTATTTGAAACTGCATGTGAGATCACATACAGACGAGAAGCCGTACACGTGCAGCGTGTGCGGGCAGTCGTTCATCACGGCCAGCAAGCTCGGGCGCCACAACAAGCGCATCCACCTCGCCGAGCGCTACCAGTGCCGCATCTGCTTCAAGATATACTCCAGGTTCGAGTTGCTGACGGCTCACTTCGACAAGACACACCCTGAAGACAAGCTGGAGGGAGAGCCGTACGACTACAACGCAATCCTACCATACCTCAAAGAGCTAGAGGAACAGCTGCGCGCGCCAGAACAGAGCAGCACTACCGTGCCGGAGTGCAAGGAAGAGCAGGACAACAAGCCCAAGGCTGAGGAGCTTTTCTGGGAGGCGGACGTGGGGCCGCACCAGCTCAGCACGCCTCTGCTGGCGATGCCGACGGATGTTAAGGTAGAGACACTAGACGAGGACCAGAAAGATCTAGTCCCAAAGATAGACATCCTCGTTGAAGAGGTGAAGGTAGACTTCGATGTGTCGGTCAAGCGTGAGGTGTCGGACGACGAGGCCGCCGTGGATGTAGCGGACGACGGTGATGACGGGGCGCCCGATGTGGATGACAAGGGCCAAGTCAAGGATGAGGACAGCCAGTCGGACGAGGACTACTTCCCGTCCAACACGTGGACGGCCCCGCGTGCTCCCTCGCCCTCCCTGCCGTCCCCGACGGCGCCcccgcggcggcgcggcggcccGCTGACGTGCGAGGTGTGCCACAAGCGCATCAGCAGCGCGTCGTACATGCGCGTGCACCTGCGCACGCACTCGGGCGAGAAGCCCTTCAAGTGCCGCCAGTGCGGCCGCGGCTTCATCACCAGCAGCAAGATGCACCGCCACGTGCTGACACATGCGCAACTTGCAGACAAAGATGAAGTGAAGACGGAGGGAGAGGACACGAAGCCGGACGTAGATGCTGACGCTGAAGAGCTGCCGATAGAAGATGGCGCTAAAAAACCAGCGAAGAAGAAATCTAAAAtgaagtccaagtcgtcgaagtCGGGTCAGCTGAAATCCCGTGAAGAGAAGCCGCGCCGCAAGCACCAGAAGAGGCCGCACGCCTGCGAGTACTGCAATCAGAAGTTCTTACACCTGAACATGCTGGAGGTGCACAAGCAGTCGCACTCGGGCGAGGCGCTGGTGCTGCGCTGCCACTACTGCCTGCAGGACGCGCCTGACCAGGAGTCCCTGCAGGCGCACCAGGCCACGCACCAGGGGCCCAAGCCCTACCTCTGCACCGTCTGCGGGAACACCTACAAGAAGAGGGAGACCATGATCTACCACCGCAAGCGGCACCTGCCGGACAAGGAGTTCGTGTGCGACATCTGCTCGAAGCGCTTCAACGCGGCCTGCAAGCTCAGCAAGCACCTGGTGACGCACCGCGCCGACAAGTTCGTGCTGCGCTACGAGTGCCCCGTGTGCGCGCACATGTTCAACACGCAGTACCACGTGCACATGCACCTGCGCACGCACCAGAAGGAGGGCCTGATCCTAGAAGAAAACCGCAGCGAGATTTTAGCTATGGTCCTCCAGAACGCTCGTAAGATCCCCAAACAAGCGTCCTCCCCTCTGTCCCTCACCACCGTGCCGCCAGACGAACGCTCCCGCGTGTGCAACATATGCGGCGAGCTGTTCCACCACTTCTACTACTTAGAGGAACATCTCAAGAGCCACGCGTCCACCATAGCCATCACGGACATAGATAAGGAAGACgagaaaaaatatatctgtcAAATTTGTAACAAAGGCTTCAAATTGCACTATTATCTCAAGCTCCACAGCTTTACTCACTCGAAGGAGAAACCCTTCATCTGCCAGCAATGCGGCAAAGGCTTCATTACTAAAGGCAAGCTCAAACGCCATTTGGAAACTCACACCGGCTTGAAGAAGTACCAATGTCACATCTGCTACAAGTTCTTCACGAGACCAAGTTACCTGCGGATACATGTGCGCACGATACACGGCACGCAGGATTATAATTTTAGGTTCGACAAAGGCTACGGCGTGGGTTCTATAGCCATGTCTGCCATGACGATGTCAGATGTCAGTCAGAATAGTATATGA
Protein Sequence: MNHATAMPGNMDVDPLSSYEYPAYDSYAAQTYPYPSKLQQSIYQAYQQTQPNYMTNPQPQEPYSNPQPALPTQQTIEPGIAPKTETQETESKPVLKRRRKEKNGQKSTYCSEKIRDATFKFYGCSVCNISYNALHELDQHVTTHKNRMTSYRLRLRNQIKKKQIKKEKKKLKKMVKIKKEIDIEIKPEDGYIGEEKAADFMSNGINPTTELNNGMIPNAEFNGINPNMELNGSVNNEISNPECNGLIENRNSENSAVDIQNSQNQTVNDLNSISNNPQGNETSSLTIGSSEGENANVSKDKENNLDEVELTNLEKIYKCFACQKQFTLSYYLKLHVRSHTDEKPYTCSVCGQSFITASKLGRHNKRIHLAERYQCRICFKIYSRFELLTAHFDKTHPEDKLEGEPYDYNAILPYLKELEEQLRAPEQSSTTVPECKEEQDNKPKAEELFWEADVGPHQLSTPLLAMPTDVKVETLDEDQKDLVPKIDILVEEVKVDFDVSVKREVSDDEAAVDVADDGDDGAPDVDDKGQVKDEDSQSDEDYFPSNTWTAPRAPSPSLPSPTAPPRRRGGPLTCEVCHKRISSASYMRVHLRTHSGEKPFKCRQCGRGFITSSKMHRHVLTHAQLADKDEVKTEGEDTKPDVDADAEELPIEDGAKKPAKKKSKMKSKSSKSGQLKSREEKPRRKHQKRPHACEYCNQKFLHLNMLEVHKQSHSGEALVLRCHYCLQDAPDQESLQAHQATHQGPKPYLCTVCGNTYKKRETMIYHRKRHLPDKEFVCDICSKRFNAACKLSKHLVTHRADKFVLRYECPVCAHMFNTQYHVHMHLRTHQKEGLILEENRSEILAMVLQNARKIPKQASSPLSLTTVPPDERSRVCNICGELFHHFYYLEEHLKSHASTIAITDIDKEDEKKYICQICNKGFKLHYYLKLHSFTHSKEKPFICQQCGKGFITKGKLKRHLETHTGLKKYQCHICYKFFTRPSYLRIHVRTIHGTQDYNFRFDKGYGVGSIAMSAMTMSDVSQNSI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00952075;
90% Identity: -
80% Identity: -