Lacc005695.1
Basic Information
- Insect
- Lerema accius
- Gene Symbol
- stc
- Assembly
- None
- Location
- scaffold745:374404-382000[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 10 0.78 1.3e+04 -3.8 1.6 15 19 499 503 498 503 0.81 2 10 0.013 2.3e+02 1.9 1.2 2 10 531 539 531 539 0.93 3 10 1.2e-05 0.21 11.6 18.1 4 19 547 562 545 562 0.93 4 10 0.015 2.7e+02 1.7 0.7 6 12 588 594 587 594 0.91 5 10 8.4e-09 0.00014 21.7 14.1 1 19 598 616 598 616 0.97 6 10 1.6e-07 0.0027 17.6 11.5 1 19 685 707 685 707 0.89 7 10 0.26 4.4e+03 -2.2 2.3 5 10 736 741 736 741 0.95 8 10 3.5e-05 0.6 10.1 8.0 1 13 747 759 747 759 0.98 9 10 0.056 9.6e+02 -0.1 0.8 2 10 760 768 760 770 0.94 10 10 1.4e-06 0.023 14.6 15.4 1 19 774 792 774 792 0.94
Sequence Information
- Coding Sequence
- ATGTCTCAGTGGAACAATTCGTACGCTTATAACAACCAGTATCAAGGCCATAATACCTGGAATGGGGACATGAATGGTCAATATCAAGCTTATTATCCCAACAGACAATTTGATACCAGTAATCAATATGTGAGCTTCAATGAATTCCTTGCTCAAATGCAGACTGCTGGTGCTCCTGCGGCGAACCCTGTCGCGTATAATAACATCCAATATCCAAACTATCCTAATAATCAATACAGTTACCAAAATATTCCATCACAAAGTGCTCAAATTGATCACAGTTATGGGGCAAATGTGACAAATAATATTGTATCATTAAATAATCCTGAAGCATCTCAAGTGTATCATCAACTAGACCCTCATCATCAAAAGCAATATGATTCCACTTTAGTAGAAACAAATAAATACAATGAAATGGTGTTCAACTCCAAATTGACCCCAACCGCAACAGAATTTGTTCCTAAAAGTTCTGGTGTTGATTCTACTGACAATTCCAGTAGTATACCACAACTGAGTAAACCTTCAACTAGCAAAATTTTTAATGAAAATGTAAATATAAGCAATTCCAGTAGCCAAAATAAGCCATCTAGTTCTGAAACAAATTGGAGAGAAAGACCCCAAAGTTCTCAACAAAATGGTAGTTCTAATGTTGAGGAACCAGTGGATAGACAGAATAAATTTTATAGACAGAATAGAAATGGGTCTGCAAATAATTACGATAAGCACAGCCAAAACAATGATTCTAATAACCAAAGTCACGAATCTTATTACCGGAACCAAGAATCTAACAAAAGCAATAATGCTAATGGACATAACCAAGACGGGAATGGCTCTAGATATGGGACTGACACAAATAACGATAATTCCGAGACCAGTACTCGTCAACAGGAGCGGAGCAGACGGAATGACTCCAACAACTACCAGAGGTCGAATAATCGTTACTATGATACCAACAACAGAGAACAGAGCAGAAATGCTGATAGCTATCGTGGAGATGAGGGCCAGTCGAGAACCAACTCCAAGCATAATAATAAAAATAAGGAAAATGACGCTGGTAGAATGTTTTATAATAGTTCAATACCTAAGGGAAGTCAGGATGTGAGGAATGGTAGAGGAGATGGCTCTGGTCGTCGAGGATGGGCCGGCAGTCAACGTTTGAGAACAACTGAACGTAACACCGTGGAGGATGAACAGTATGCCAATACATATCTTCAGTATAGGGAAGAGAAGCTTAATAAGGAACCTAAATCGAGTCCCATAAGGAATAAAAATTATAATAATAAAAATGGAACTAATAGTGGAGCAAACACAGAAATGACACAGCGGGAACGTCTCAGTGAGCAGTTAGATAAGGGTACATTGGAGTGCCTGGTGTGCTGTGAACGCGTGAAGCAGACAGATTCAGTGTGGTGGTGCTCCAACTGTTACCATGTTCTACATCTCAAGTGCATCAGGAAATGGGCGTTGAGTAGTGTCATTGAGGGTAAATGGCGTTGTCCGGCTTGCCAGAACGCGTCCAACGAGATACCAACGGAATATCGTTGTATGTGTGGTGCGGTCCGTAATCCCGAGTACCAACGCGGCTCGGGAGGGGCGCACACGTGCGGGCGCGCGTGTCAACGACCCCGCTCGTGTCCGCATCCTTGTACACTACTGTGCCATCCAGGACCCTGCCCACCTTGCCAGGCTACCATTAATAAACATTGTGGCTGTGGTACGGAGACCCGATCCATCTTATGTAGCAGCAAGTTGCCTCAAGTGTGTGGTCGAGTGTGTCATAAGACACTGGACTGCGGAGCGCACACTTGCCAGAAGGATTGTCATGAGGGACCCTGCGATGAGTGCAAGGAGACTGTTACCCAAGGTAGTTTAATAGTTAATATTTGTGCTGCTGTAAAGTATGTGAGTGATATATTTGTAATGAATATTGGTGTGAAATTAGAGCTTGTAGTGATGTCAATGTTGGTATTATCTAGAATACAGAAGGGTCAGCGTAAATCGTGTACTGACCCCATACCGCTGTGTGACAACATCTGCGCCAAGCCGCTGCGCTGTGGGCCCGACGATGAGAGGCATTTCTGTAAAGAAAAATGTCATGAAGGTGAATGTCCGGTGTGCCCCGACTCTACCCACCTGCAGTGTCGATGTGGACACTCGACGCGAGAGGTGCCCTGCCGAGACTTGCCTGAAGCACGGAACAGTGTCACTTGCCAACGGAAGTGTAATAAGAAGTTGAGTTGCGGTCGTCACCGTTGTCGTGAAGTGTGCTGCGCGGGCGGCGAACATCTGTGCACTGTGGTGTGCGGTCGTAGTCTGTTCTGCCAGCAACACCGCTGTGAGGAGTACTGCCATGCTGGCCACTGCGCGCCATGCCCACGACTCAGAAAGAAAAACTATTCCGTGTTCTCAAGAGGAGTTCTCGTGCGGGCTGCCGTGCGGCAAGCCGCTGCCCTGCGGCAAACACACCTGCATCAAGATCTGCCACAAGGGACCTTGCGACACTGGCAAGTGAGTAGACTTGCTTACTGGTTTCCTAGTGGCTTATGA
- Protein Sequence
- MSQWNNSYAYNNQYQGHNTWNGDMNGQYQAYYPNRQFDTSNQYVSFNEFLAQMQTAGAPAANPVAYNNIQYPNYPNNQYSYQNIPSQSAQIDHSYGANVTNNIVSLNNPEASQVYHQLDPHHQKQYDSTLVETNKYNEMVFNSKLTPTATEFVPKSSGVDSTDNSSSIPQLSKPSTSKIFNENVNISNSSSQNKPSSSETNWRERPQSSQQNGSSNVEEPVDRQNKFYRQNRNGSANNYDKHSQNNDSNNQSHESYYRNQESNKSNNANGHNQDGNGSRYGTDTNNDNSETSTRQQERSRRNDSNNYQRSNNRYYDTNNREQSRNADSYRGDEGQSRTNSKHNNKNKENDAGRMFYNSSIPKGSQDVRNGRGDGSGRRGWAGSQRLRTTERNTVEDEQYANTYLQYREEKLNKEPKSSPIRNKNYNNKNGTNSGANTEMTQRERLSEQLDKGTLECLVCCERVKQTDSVWWCSNCYHVLHLKCIRKWALSSVIEGKWRCPACQNASNEIPTEYRCMCGAVRNPEYQRGSGGAHTCGRACQRPRSCPHPCTLLCHPGPCPPCQATINKHCGCGTETRSILCSSKLPQVCGRVCHKTLDCGAHTCQKDCHEGPCDECKETVTQGSLIVNICAAVKYVSDIFVMNIGVKLELVVMSMLVLSRIQKGQRKSCTDPIPLCDNICAKPLRCGPDDERHFCKEKCHEGECPVCPDSTHLQCRCGHSTREVPCRDLPEARNSVTCQRKCNKKLSCGRHRCREVCCAGGEHLCTVVCGRSLFCQQHRCEEYCHAGHCAPCPRLRKKNYSVFSRGVLVRAAVRQAAALRQTHLHQDLPQGTLRHWQVSRLAYWFPSGL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -