Basic Information

Insect: Lerema accius
Gene Symbol: -
Assembly: None
Location: scaffold680:115424-128383[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 6.1 3.8e+02 1.8 0.4 1 8 227 234 227 249 0.82

2 14 0.0015 0.092 13.2 1.3 1 21 305 325 305 326 0.93

3 14 0.0035 0.22 12.0 0.5 1 23 342 365 342 365 0.97

4 14 0.017 1.1 9.8 0.2 3 20 404 421 402 423 0.92

5 14 3.4 2.1e+02 2.6 7.2 1 23 688 711 688 711 0.95

6 14 0.1 6.4 7.4 0.8 1 23 716 738 716 738 0.97

7 14 9.9 6.1e+02 1.2 2.1 2 22 760 779 758 780 0.72

8 14 0.55 34 5.1 1.6 2 23 844 865 843 865 0.93

9 14 0.018 1.1 9.8 0.6 2 23 881 902 880 902 0.96

10 14 3.9e-07 2.4e-05 24.4 4.8 1 23 908 930 908 930 0.99

11 14 0.00011 0.0068 16.8 3.2 2 23 936 957 935 957 0.97

12 14 0.19 11 6.6 1.5 3 23 965 986 963 986 0.95

13 14 0.32 20 5.9 0.1 3 20 995 1012 994 1016 0.93

14 14 0.00096 0.06 13.8 0.5 3 23 1025 1046 1024 1046 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	6.1	3.8e+02	1.8	0.4	1	8	227	234	227	249	0.82
2	14	0.0015	0.092	13.2	1.3	1	21	305	325	305	326	0.93
3	14	0.0035	0.22	12.0	0.5	1	23	342	365	342	365	0.97
4	14	0.017	1.1	9.8	0.2	3	20	404	421	402	423	0.92
5	14	3.4	2.1e+02	2.6	7.2	1	23	688	711	688	711	0.95
6	14	0.1	6.4	7.4	0.8	1	23	716	738	716	738	0.97
7	14	9.9	6.1e+02	1.2	2.1	2	22	760	779	758	780	0.72
8	14	0.55	34	5.1	1.6	2	23	844	865	843	865	0.93
9	14	0.018	1.1	9.8	0.6	2	23	881	902	880	902	0.96
10	14	3.9e-07	2.4e-05	24.4	4.8	1	23	908	930	908	930	0.99
11	14	0.00011	0.0068	16.8	3.2	2	23	936	957	935	957	0.97
12	14	0.19	11	6.6	1.5	3	23	965	986	963	986	0.95
13	14	0.32	20	5.9	0.1	3	20	995	1012	994	1016	0.93
14	14	0.00096	0.06	13.8	0.5	3	23	1025	1046	1024	1046	0.97

Sequence Information

Coding Sequence: ATGTTGGAAAATAGCAGGAAAAGGTCTAGAAAGTCCAAGTTGGAGGTCAGGGAGGATGTAGAATTAGAAGAAGCTACATTTTTATACATGGAGGCATTTGATGCTAAGGTAAAAGAGGAACCAATGATGGACATTACTCCGACAACACTACTCACTAAAATTAACCAAGCACAAGATCCTTTTAACGATGTAGCAACCCCGACAGTTGAACATAAGCCTCTGATGGAGTTCTCCGTCAAAATAGAAGTTGAGGAATGTGACGAGACGGAGTTAAAAGATACAGAGACAATTAACGATCAAGATAGCACGATTAACCAAAATAAATCACAAATTAAGGATGTGAAAGATAACTGCCCTTCGACAAGTTTAGCAAATAATGTCAAACCTACTGTTAGTAATATTAAACCTGTTAAGGATGAAAATAACCAAAAAGAAGTTTCTAAAAAAGAATTCAAGGAATACATCACAAATAGACCTACAATTCTCAAAGTTACTGACCGGCTTCTTAAATCAGTTGAAATTGCCGATCAGTTTCTTGCAATTGGAGTTAGAAATTATGCCGGACGGGTACTTGATGAAGTAGTTAAAGATAAAAGAGATTTGCTGCTACAAAATGCCTTGGAAGACTGGCAGACATGGCATCAGGAACATTCAGCGGTCAGAGATACACCGTTGATATATAAATGCTATATTTGTGGAGAAGCATGGTGGTACCTGCACGATTTTAGCGAGCATTTAGATAATCATTTGGATTTAAATCAATTTGAGGTCTCGTTAGAATCTGATAAAGATGAATGTAGCTTGATTTGCTTCCAACTTGATATAGTATACCAGGATATAGAATTACCTAAATCTAACTGTGATAGATGTGGGAAGCCTGCCGAAGCACATGCGTTTGTCGATAATGATCCTTACATATGTTTGGGTTGTAAACTAACTTTTTCTACATGCTCACAACTGAAATTGCATGAAAACAGTTGTCCTCAGTTCAAAAAAGAATTCTGTCCTGACGATTCAGATGTATATGAATGTTCAGTATGTAATTTTGTCTGTAATGGAGAAGCAAGTCTTAATGATCATATGATAAGAAGACACTCGGTCCGATCCGACATGGTAACGACATGGGACATGAAATTATGTCCGATATGTTCACGAAAATGCAGTCTTATTTCTCTACACATTTGTATTAAAAAAACTAATAACTACGGCTGTAATTACTGTGGGAGAAGTTTCCAGAAAAAGGTATATAAAGAAATTCATATGGCGAATTACAGTGGTGCAGTAGAATGTAGAATTTGTAAAAAAACTTTAATGGCTAAGTGTATGGAGTACAGTCATATGTTGCAACATACGGACAAATTTGCGTTGATGTATAAGTGCATTCAATGTATCGAGGGAAGATATTATCCTGACGAATACTCAATAATGTCTCACACAAAGAATGTTCATCTACGGCCATTTGAAAAGAAATTTAAATACTTGGAAATGGTTATATTACCAAAACAGTGCATGGAGAAGTCTTCGAAGGCTTTACAAATCGGAAATTCAGCAAAACCAATAACAGAGTCACAACCTTCAAAAGACAAAAACGACGTTCAAAATGGAATACCGAACGATGTAGCAAATTCAAATGTGTTTGTACCCTCATCTAAATACAGGACTACACAGAAACAACTTGAAATTCCAATAGATGTGGTTATAAAACAGGAACCTGTTGATGGAGATGTTGAGACGGTGTGTGTGTCAGAACTGTCCAGCATAAAGACTGAATCTGTTGAATCGTCCGGCAAAATACAGATTTCTGATATCACTAGTTTGCAGGAGACAGATGATAGTGATAAATTGGAAGCTGGTGATGAATCTGGTGATAACGATGCTAGTGAGAGAAATACTGATGATGAATGGCAGGATGGGGAGAAATCTAAAAGCGGTCTACGCTACACTTGTGTATGCAAAAAAATGTTCGTTGGAACTCTCGCAGCATTTAAACGACACAAAAAAGCATGTACAGTCATGAACAAAATTAGACAACAACGGAAAGAGTCAAAATTACCCACAACATTCACCTGTACTAAATGTCATAATACCTTCAATACAATTCTACGGTATTGTAAACATCTTAGTAGGGTACACTATTTCCAGAATTACATGTGCCCGCAATGTCTGTACACATGTGATAGTTTAGGCAAACTTACCGGACATGTAACAATGCATGTTAATAGGAATTTCTTGAAGATGCGAATGATAAGTGAAAGTCAGGAATGGACGAAGTGTAATAAGTGCAAGATTTGTAAGAAGCCTATTGAAAGGATTGATTATTTTAAGCATTGGGAGTCCCACCTGGAGCTGAACTCAGGAGATCCTAGCCAGGCCCAGGACAGTAGCACTGAGGAAGACACCTTGGTTATTGATATGGAGTCTCCGATCCAGGGGTACAACGAGGGACAGAGTTTATTCAGCCCTGAAGTCATGCAGAAAGCGCTAGATTGGCTCCAATCTTCAAACGGCTGGAGCGCTGTAGACGAAAAAACATGCGTGTTTTGCGCGCGCCGGTTCACTCGTAAAAATGACAGTAAACGACACGTCATCGAACATTTGCTGCAAGATGCGTTCGCGCAGCGCGCGCCTAATGCAGGACTGAGGTGTCAGATATGTGCAGCGGGGTTCCCCAAAGGTGACAGTTTCAAACACCACATGCGAGAACACGCCGGTTTGCCTGTATATCAGTGTAATCTATGCGGGAAGTCGTTTAGTGATTCTAGCAACTTCTGCAAACATAAGAAGGTCCATGGACTCTCGCACATCACCTGTTCCGTGTGCAGTAAAAAGTTCCATAACGCTAACCATCTTGCCAGACATATGGAGATGCACGAAAAGACGAAGCCGATAATCTGTGATATATGCGAAAAGATATCGTTTACACAATCTGCGCATAGACGACATTATAGGAGCACGCATGAGAAGCACAAGGCGCGGTCGCTGTGTCCTATATGTCGTATAGGATTCACCCGGCTCAAGGACAAATGGGACCATATGTGGGTGGTGCATAAGGAGCGCAGTTTCAACGCGGATTGTCCTATATGCTCGCAATCGTTTCGTCGCTTCGCCGACGTTAAATCTCACGTGAAAAAAATGCATGATAAGAACGCTCGCTTGAGCGCCGACCGCGGGATGGTCGTGTTCTCCTGA
Protein Sequence: MLENSRKRSRKSKLEVREDVELEEATFLYMEAFDAKVKEEPMMDITPTTLLTKINQAQDPFNDVATPTVEHKPLMEFSVKIEVEECDETELKDTETINDQDSTINQNKSQIKDVKDNCPSTSLANNVKPTVSNIKPVKDENNQKEVSKKEFKEYITNRPTILKVTDRLLKSVEIADQFLAIGVRNYAGRVLDEVVKDKRDLLLQNALEDWQTWHQEHSAVRDTPLIYKCYICGEAWWYLHDFSEHLDNHLDLNQFEVSLESDKDECSLICFQLDIVYQDIELPKSNCDRCGKPAEAHAFVDNDPYICLGCKLTFSTCSQLKLHENSCPQFKKEFCPDDSDVYECSVCNFVCNGEASLNDHMIRRHSVRSDMVTTWDMKLCPICSRKCSLISLHICIKKTNNYGCNYCGRSFQKKVYKEIHMANYSGAVECRICKKTLMAKCMEYSHMLQHTDKFALMYKCIQCIEGRYYPDEYSIMSHTKNVHLRPFEKKFKYLEMVILPKQCMEKSSKALQIGNSAKPITESQPSKDKNDVQNGIPNDVANSNVFVPSSKYRTTQKQLEIPIDVVIKQEPVDGDVETVCVSELSSIKTESVESSGKIQISDITSLQETDDSDKLEAGDESGDNDASERNTDDEWQDGEKSKSGLRYTCVCKKMFVGTLAAFKRHKKACTVMNKIRQQRKESKLPTTFTCTKCHNTFNTILRYCKHLSRVHYFQNYMCPQCLYTCDSLGKLTGHVTMHVNRNFLKMRMISESQEWTKCNKCKICKKPIERIDYFKHWESHLELNSGDPSQAQDSSTEEDTLVIDMESPIQGYNEGQSLFSPEVMQKALDWLQSSNGWSAVDEKTCVFCARRFTRKNDSKRHVIEHLLQDAFAQRAPNAGLRCQICAAGFPKGDSFKHHMREHAGLPVYQCNLCGKSFSDSSNFCKHKKVHGLSHITCSVCSKKFHNANHLARHMEMHEKTKPIICDICEKISFTQSAHRRHYRSTHEKHKARSLCPICRIGFTRLKDKWDHMWVVHKERSFNADCPICSQSFRRFADVKSHVKKMHDKNARLSADRGMVVFS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -