Basic Information

Insect: Lerema accius
Gene Symbol: -
Assembly: None
Location: scaffold807:985188-991884[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 0.00012 0.0077 16.6 2.0 1 23 581 604 581 604 0.92

2 7 2.3e-06 0.00014 22.0 1.4 2 23 621 642 620 642 0.97

3 7 4.8e-05 0.003 17.9 1.2 1 23 648 670 648 670 0.96

4 7 0.0026 0.16 12.4 0.8 1 23 686 708 686 708 0.98

5 7 0.00015 0.009 16.4 5.7 2 23 713 736 712 736 0.89

6 7 3e-05 0.0019 18.5 2.9 1 23 742 764 742 764 0.98

7 7 2.5e-06 0.00015 21.9 2.3 1 21 770 790 770 791 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	0.00012	0.0077	16.6	2.0	1	23	581	604	581	604	0.92
2	7	2.3e-06	0.00014	22.0	1.4	2	23	621	642	620	642	0.97
3	7	4.8e-05	0.003	17.9	1.2	1	23	648	670	648	670	0.96
4	7	0.0026	0.16	12.4	0.8	1	23	686	708	686	708	0.98
5	7	0.00015	0.009	16.4	5.7	2	23	713	736	712	736	0.89
6	7	3e-05	0.0019	18.5	2.9	1	23	742	764	742	764	0.98
7	7	2.5e-06	0.00015	21.9	2.3	1	21	770	790	770	791	0.95

Sequence Information

Coding Sequence: ATGGATGGGTTTTGTAGAGGATGTCTCAATAAATTCGACGATCCTCTAGAATTACTGCAGTATAATGAAGAAAGACGAAGATTATTTGTTTATTCCACTGGATTACAGGTGAAAAGAAATGACTTGTTCACATTCCAACTATGTAAAGAGTGCTACTTTTCTATGAAAACATCATGTAGATTCAAGAAAATGTGTAGAAATTCTGATAAAAAAATCAGAAACTTCTTAAGACTCAAGGATGTTGACGATAGCATGGATTTTGGTAGCTTCTTGAAGATAAAGGAAGAGCCTTTGATGTTCAGATTGCCAATACTAAGTGGAGCCAGCACTCCTGCTAACCATAAAGCTAAAGATGATGATAATGAATCAACCTGTACTAGTATTCAGAACTTTATGACTGACATATTAAGAGCCGATGACATAGACGATTCGGAAGCTAAAATAATCAGGGAAGTGATTGAGGAAGAGGCGGATGTTCTAGAAGATTCTCTGGACTCGCATTGGCTTGAAGATGATGGTGTTAATGATTATAGATTAGATCTCAGTTTGAGCCGGTTTTCAACTCCTAAGTCAACAAATCATGACCGCATGACGAGTTCTGAGCATCGGGAGATTACATCGGATCTAACTTCAGGGGAAGACTATGACAATATTCCTATAGATATTTCCCTTAAGAAACTAACAGATCCTGTGAAAAATACCTATGTACTACATAATCTAGTTGATATGAATGCTCCACATGATACTAGGAAACGATGTATTATTGATAAGAATTTAGAAAAAGCACTAAAAGATGAAAATAATCAGGAATTTTCTTTGCAAGAAATATTGGCTTCTCCAGTATTTCCATCAAAGTCTGGAGCCTCAACACCTACAATAAAACATATTATTTTTGGGGACAAAGGAAAAAATAATAAAAAAACGAAGTCTCCCAAATTTGAACCAGATTTAGATTCAATTATTGGAAAATTAGACAAAGGTATGAAGTCACAAGAACATTCGCAGAAACGAAAGCTCAATTCAGGCGCTGAAACAGGAAAAGCATCAGGAAAACATGAATCAGGAATGAAAAATACTGGGAAAGCTGAAGATAAAAACTTAGATTTTATTGAGGTCATTGAAGGAAAAATAGATCTGGGTCAATTCAGTGCAGGGAAAGTACTACAAGAAAAGTTAGACTTGAGCAAAGGAAAGATAAGAGAAGAAAAGAAATTGTTTAAAGGAGAGTTGTTAAAGCTTTATGAGGACAGTTTTCAATTAGATGGAGATTTGAATTTAGATGATTTTGTTACTGAAAATGCAGAAGGGCCTGAACCTCACTTAGATAATATAAATGGGGATAATCAAAACAATCGTAATAAGGATTTAAACGTACTCGAAGATAACAATAGAAACTTAGTCCCTGATAATAGGAATGATGAAGAAAACTTCGAGATTGGGTTATTCCACGATCAAGATGGAGAATTTTTTGAAGAAGACAGCGACGAGGATATATTAGAAGAATTTTTGAATGCAGAGAAAGAAAAATTGGCTAATGTCGAGATGAAAAAGAAAGCTGTCACTAATTTAGTGAACGCTGCACACATAAACGATGAAGAGCTAACAGAATTGCTACAAGAAGCTTATGACCATAACTTTGAGATTATGAAGGGGAAGAAAATTAACCAGAGTCCGCTCAAAGGAATACAACTTGCAAGGAAGATTATTTCACCCCCAGAAAGCAAGTATTGTATGACGAATTTTTACTGCAAAATGTGTGACAAAAAATTCAAAAGTCTTAAGGCTTTGAAAGTGCACTTTGTGAAGGGTCACCGATACAGAATTATTACCCCGAAGGCGCCTTGGGTGGTCAAAGTGAAGATGTGTGATTTATGTGGTACAACATTCACCAACAGCAAATCTCTCGTCAGACATTTGAAGACTCATGATAAACCGAGGGTGTACTTGTGTAACTACTGCCCGCTGACATTCACAAGTGAAAACTATCTCAACAACCACAAGATGACCCACTCGATGGTCAGCGCGGCCAAAAATGAAAACAAATTGCTTATGAAATACGTATGCAAGATCTGTGGCGCCGTCAGTACGTCGTCATCCAATCATATCACTCATGAGCGACGACATTCCAAGAGCTACACCTGTCACTGCGACCTGTGTGGGAAGGGATTCTATAGAAAGAGCGAATTAGACACGCATAAGAGAAAACATACCGGAGAAAAGCCCTATACGTGTCCGTGCTGCCCTATAAGCTTCTCTCGGCGCGACACACTCAACAGACATTTAAAACGACATACAGGCGAAAGAAGATACAAATGCCAGTACTGCAACAAGTCATTCTCCAAGAGCTACGATCTGAAGAGCCATCAAATTAGGAACAAGATTTGTATGAAGCTGCGGGAACTAGATATGATTGACCCGCACTAG
Protein Sequence: MDGFCRGCLNKFDDPLELLQYNEERRRLFVYSTGLQVKRNDLFTFQLCKECYFSMKTSCRFKKMCRNSDKKIRNFLRLKDVDDSMDFGSFLKIKEEPLMFRLPILSGASTPANHKAKDDDNESTCTSIQNFMTDILRADDIDDSEAKIIREVIEEEADVLEDSLDSHWLEDDGVNDYRLDLSLSRFSTPKSTNHDRMTSSEHREITSDLTSGEDYDNIPIDISLKKLTDPVKNTYVLHNLVDMNAPHDTRKRCIIDKNLEKALKDENNQEFSLQEILASPVFPSKSGASTPTIKHIIFGDKGKNNKKTKSPKFEPDLDSIIGKLDKGMKSQEHSQKRKLNSGAETGKASGKHESGMKNTGKAEDKNLDFIEVIEGKIDLGQFSAGKVLQEKLDLSKGKIREEKKLFKGELLKLYEDSFQLDGDLNLDDFVTENAEGPEPHLDNINGDNQNNRNKDLNVLEDNNRNLVPDNRNDEENFEIGLFHDQDGEFFEEDSDEDILEEFLNAEKEKLANVEMKKKAVTNLVNAAHINDEELTELLQEAYDHNFEIMKGKKINQSPLKGIQLARKIISPPESKYCMTNFYCKMCDKKFKSLKALKVHFVKGHRYRIITPKAPWVVKVKMCDLCGTTFTNSKSLVRHLKTHDKPRVYLCNYCPLTFTSENYLNNHKMTHSMVSAAKNENKLLMKYVCKICGAVSTSSSNHITHERRHSKSYTCHCDLCGKGFYRKSELDTHKRKHTGEKPYTCPCCPISFSRRDTLNRHLKRHTGERRYKCQYCNKSFSKSYDLKSHQIRNKICMKLRELDMIDPH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -