Basic Information

Insect: Lerema accius
Gene Symbol: Znf639
Assembly: None
Location: scaffold549:304684-307468[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.015 0.94 10.0 0.7 1 23 268 291 268 291 0.93

2 10 0.001 0.063 13.7 0.3 2 23 318 340 317 340 0.95

3 10 9e-05 0.0056 17.0 0.3 1 23 363 385 363 385 0.98

4 10 1.1e-05 0.00069 19.9 0.9 1 23 389 412 389 412 0.97

5 10 1.2e-05 0.00075 19.8 0.4 1 23 417 440 417 440 0.90

6 10 0.21 13 6.4 1.2 1 21 446 466 446 469 0.83

7 10 7.3e-08 4.5e-06 26.8 2.7 1 23 476 499 476 499 0.98

8 10 0.0017 0.11 13.0 4.3 1 23 505 527 505 527 0.98

9 10 2e-06 0.00013 22.2 3.0 1 23 533 555 533 555 0.98

10 10 0.00015 0.0091 16.4 1.8 1 23 561 583 561 584 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.015	0.94	10.0	0.7	1	23	268	291	268	291	0.93
2	10	0.001	0.063	13.7	0.3	2	23	318	340	317	340	0.95
3	10	9e-05	0.0056	17.0	0.3	1	23	363	385	363	385	0.98
4	10	1.1e-05	0.00069	19.9	0.9	1	23	389	412	389	412	0.97
5	10	1.2e-05	0.00075	19.8	0.4	1	23	417	440	417	440	0.90
6	10	0.21	13	6.4	1.2	1	21	446	466	446	469	0.83
7	10	7.3e-08	4.5e-06	26.8	2.7	1	23	476	499	476	499	0.98
8	10	0.0017	0.11	13.0	4.3	1	23	505	527	505	527	0.98
9	10	2e-06	0.00013	22.2	3.0	1	23	533	555	533	555	0.98
10	10	0.00015	0.0091	16.4	1.8	1	23	561	583	561	584	0.95

Sequence Information

Coding Sequence: ATGGATACAAGACGTAAAGGTTCAACTTTCGGCAAATGTAGAATTTGTAACGATGAAGGGAACCACAGGGATCTGATGAGGGAGTATAATTTAAATGGAAAGACGGAAGTTTATTACAATATGTTTATGGAATGCTTTAATTTATTCTTGTCAACATCACCAGAACTAAGCAAGCTTATTTGTTCTTCATGCATCACAAAACTGAGAGATGCAGTGTCGTTCCGTAGTAAGGTAGCTACTGCTGAGCAAAAATTATTAGGCTCAGCTTTAAATAAGGATACAATATTTGTTAACGTACCAGAGCATTTAGGAGATGAGCTGGAAGTGAAACCGGAGCTTGTGAAGGATGAGAAGCTGGAGTACTCCATCACTGATGATGAGCAGGTATCACACGAGGTGGCAGTTGAGTTGGAGGAAAACGGAATAGATTATGAATCAGATATACCTATGCAATGTGATGATGTGAATGACATCATGTCAGTAAGTGAAGATAGCAAATACTTGGTGGACGGGGAAGCAGAATTTGTTGCTAAATACCACAGGAGAGACTTCCGGTTGCCAACACGCACTACTCTCTATGCTAACAGCTGTGCAGGGTTCGTCAACCATTTGGATATGCTGAAAGGTCAAATGATATTCCCAAAAATGCTTCAGAAACTATTAGAGGAATCTGAGCGCGATGTCGTTCCTTCGAACAAAAGCGACCTCTATGTAACTGAGAAAGTGGCTCACATACTAAATGCTGCAACAATATTACAACACTCAAATGCAACCCCGTTTAAGAGCAAAACTCGGTTGGGATTTCCCTGTTATTACTGTAGGAATATATTCGAGAATTTGGACAAACTTAAGGAACATCAAACAGCACAACATCGGAGGACTGATTTGAAGAGAATCCTGTCCGGATATGGGGCTGAGTGTTTTGTAGTTTATGCTGACGTAACAGACCTTAAATGTACTATATGTAATGAAAGCATAGCAAAGCTAAGTGATTTAAAGTCTCATTTAATAAAGAGGCATAAGAAAACAATTTATACGGAATACAACGACCGGGTCATACCATTCAAGTTATCACCAACAAATGTGTATGAGTGTCAGATGTGTGGATTTAACTTTGAAACATTTGGCTCAATTGAACGGCACATGAATGTACATTTCAGAAATTACGTCTGCAAGGAATGTGGCACTGGTTTTGTGACAAAATACCGTTTGAAAGTACACACCAAAAGCATGCATATAGAAGGTAACTTTCCTTGTGAAGTTTGTAAAAAGGTTTTTACGACACAGCAGAAGTTAAAAAATCATGTAGACGCAGTTCACAAATTGGTGAAACGGTTTAAGTGCCCAAAGTGTCCAGACCGATTCTCAGAATACTTTAAACGTCAAAAGCATCTTGTTGAAATACATGGGGTAGCCCCTCTGCAGTATAAATGTAATGTTTGTGACAAGAGTTTTGATAGACGGTATACTCTATCCAGACATATGAAGCGAGACCATTTAGAGGAAAGGGACTTTCAGTGTCAAATGTGTACGTACAAATGTTTTACTAATAATGAGCTGAGGGTACACATGATAAAGCATAATGGGGAAAGGGTGCATGAGTGCTCAGTGTGTAAGAAGTCTTACGCCAGAAAGAAGACTCTCAGAGAACACATGAGAATACACAATAATGATAGAAGATTTGCCTGCGCTGTGTGTGGACAGGCCTTTATACAAAAATGCAGTCTGAAAGGACATGTTAAAACACATCATTTGGAGTACAGTTTGCAATAA
Protein Sequence: MDTRRKGSTFGKCRICNDEGNHRDLMREYNLNGKTEVYYNMFMECFNLFLSTSPELSKLICSSCITKLRDAVSFRSKVATAEQKLLGSALNKDTIFVNVPEHLGDELEVKPELVKDEKLEYSITDDEQVSHEVAVELEENGIDYESDIPMQCDDVNDIMSVSEDSKYLVDGEAEFVAKYHRRDFRLPTRTTLYANSCAGFVNHLDMLKGQMIFPKMLQKLLEESERDVVPSNKSDLYVTEKVAHILNAATILQHSNATPFKSKTRLGFPCYYCRNIFENLDKLKEHQTAQHRRTDLKRILSGYGAECFVVYADVTDLKCTICNESIAKLSDLKSHLIKRHKKTIYTEYNDRVIPFKLSPTNVYECQMCGFNFETFGSIERHMNVHFRNYVCKECGTGFVTKYRLKVHTKSMHIEGNFPCEVCKKVFTTQQKLKNHVDAVHKLVKRFKCPKCPDRFSEYFKRQKHLVEIHGVAPLQYKCNVCDKSFDRRYTLSRHMKRDHLEERDFQCQMCTYKCFTNNELRVHMIKHNGERVHECSVCKKSYARKKTLREHMRIHNNDRRFACAVCGQAFIQKCSLKGHVKTHHLEYSLQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00971580;
90% Identity: -
80% Identity: -