Lacc015061.1
Basic Information
- Insect
- Lerema accius
- Gene Symbol
- Zbtb41
- Assembly
- None
- Location
- scaffold11834:52665-67024[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 16 0.0059 0.37 11.3 1.0 1 23 25 47 25 47 0.97 2 16 0.0033 0.21 12.1 4.4 1 23 53 76 53 76 0.96 3 16 0.035 2.1 8.9 5.6 1 23 82 104 82 104 0.96 4 16 6.7e-06 0.00041 20.6 0.5 1 23 110 132 110 132 0.98 5 16 0.0002 0.013 15.9 4.2 1 23 138 160 138 160 0.97 6 16 0.00017 0.011 16.2 1.5 1 23 167 190 167 190 0.92 7 16 0.0012 0.075 13.5 0.2 2 23 199 221 198 221 0.95 8 16 0.0005 0.031 14.7 0.4 3 23 229 249 227 249 0.97 9 16 0.00011 0.0069 16.7 1.2 1 23 255 279 255 279 0.97 10 16 1.5e-05 0.00092 19.5 3.5 1 23 285 307 285 307 0.97 11 16 5.9e-05 0.0037 17.6 2.0 2 23 315 337 314 337 0.97 12 16 0.014 0.84 10.2 0.0 1 23 344 366 344 366 0.98 13 16 0.1 6.3 7.4 0.4 2 20 373 391 372 392 0.95 14 16 1.2 75 4.0 4.0 1 20 927 946 927 949 0.90 15 16 2.7 1.7e+02 2.9 0.5 2 23 960 980 959 980 0.74 16 16 0.00034 0.021 15.2 1.9 1 23 1110 1132 1110 1132 0.98
Sequence Information
- Coding Sequence
- ATGGCGAAAATAAAAAATACTGCGAAGCCTGAAAAAGAAATTAAAAAGAAAAAAAAATTCAAAGCCAAACACTTTCCCTGCAGTTACTGTAGTAAAACATTTCAAGAGCGAGGTAATCGAGACCAGCATATGCTGTTGCATTCCAGTGAGAAACCATTTGCCTGTACTCTATGCTCACACACTTGCAAGACCAAGAAATACTTGGCTAGACATGTGCGGGTTGTTCACAATCCTCCAACCAGTTATAAATGTGAATATTGCGATAAAATGTTTCATTATAAATGTGTTTTGGACAAACATAGAGTTATACATACAAATGCAAGGCCTTATAAATGCAAGGATTGTGGCAAAGGATTCAACTCTGGATATTCATTAAAATCACATGTATTGATACATAAAGATTTAAAGCCGTTCAAATGTAAGTATTGTGAGTACGCGTGTAGGGATAATTCAACGCTTCGTAGACACGAGGAGAGACATAGAGGTATCGTGACGAAATATCATTGCAACATTTGTGATAAAGAGTTTTCAAAAAAACAAACACTACAATATCATGTTGCGGAAGTTCATATGAAGGTAAATCTGAAAAAGATCCCCTGTGAACAATGTGACAGCATGTTTAGGACGAACAAGACGCTAATGATACACATTGAAGTGAAACACAACAGAAAGTTTGCAACGAATTGCGAAATATGTGGGTTGAAGCTTGCTAACAAGTATAATATGAATACTCATCTGATGACTCATGTTGACGTAAAACCGTATAAATGTGCTTTTATCGGCTGCGAGAAACGTTATAAAAGTAAAAGTACTCTACAAAAACATACAATAATACACTATCCCGAGAGGCAGTTTCCGTGTAAAATCTGTGGGAAGAAGTTCACGAGAAAGATAAGATTGAAAAAGCATAAAAAACAACACGTGGTCAGAGTTAAAAATGTGCAGTGCGATTATTGTGGCGTGCATTTCTACAACAAAAACTATTTAACTCTTCATATAAGACGGAAACATTGTGGTAGAAAAATAAAGTATATCTGTGATATGTGTGATTTTGCAAGCGGGAACAAACCGGGACTTATCGTACATATAAAGAGTCATTATATGAAATTGAATAAAGAGTGTCCAATATGTGCAAAGAAATATAAAGAGCACAAATGGTTGAAATTGCATTTATGGCAGGCCCATAAAGTTAAGGAATCTAATGTATCAGCTACATTTGAAACTGATATTAAAGTAGAACCGTTAGATGTTGATGGTACTCCGGAATTTGAACTATTTGAAATAGAAAAGGAAGAAATAGTTGATGAATTACAATCATTAAATAACTACACAAATAAAGAACAAAATATTGCAACAGATACAATCACAGATAAAAGTAATGTAGGTGAAGAAGCAAATGAAAGTATTCATTTAAATGCAGATTCTGAAATCCTACAAGATAGTGAAATTTCACGATCTAATGAAACTTTTCCAACAGTTGTACTAGAAAAAAATAATACACAGATACCAAGGCATACTACTGTAGTTTTACAAGATATCATTAAGGAAAATACGCGTAAGAGTGCGAAAGAAGTATTTGTAAATGAAAACGTAATATGTAGTCATAATGCTACGGATAAAATAGTTAATACAGATAATGTTATAATAGAATCTGAAAATTTGGGAAATGACGATAATGAAAAAAGTATTCCATTTTCGAATGGAGTACTAACAGACAATGATGTAGCTAATATTAAAGATATAGAAAATGATGATCAACAAAGCTTAGATATTAATTCCACAAAATCGGTAAAACAAATTGATAAATTTCAAACAGCAAATGGAAAGTATTTACAAACAGAAACATTAATCCATAAAGATAACTCTAAAAGGAAAACTCTGGCGCATATTAAATCGAAACTAGAAGAGAAAAAAATACGAGTTAAAGCGAGAAATAATTTAAGTAACCTGAACATTAGACGTTCGAAAAGAAAAAATCTTGCGCAGATCAAAGCAGCACTATTAGAACATAGTGAAAATAATACAGGAATTAATCCTGAAATTTCCTCAGAAACTGAAGATAAAGAAGGTCTAGAATATTCTAGAGCAGTGCTTTCAGAAGATATTACTAGGTTTATGACTCAGAAGAAGAATAAGGATTCTTCTGAAATGAACTTTGATGATTTCTTCATAAAGCATATTGTTGAACGACAGGATGAAACAAGTAAAAATACTCTCGAAATAGATAAAGATTGTGAATCATACGCTAAAGACTACATAGGTAAACTTCTAGCAAAAAGAAGGAACGAAAATGAAGTCAAATTTATCGAGAAAACGAGACAGCAATATAATGAAAGAATAAGAAGAGCTAAAAAACTACGACCGGAAAAAATTGCAATTAAATATTTGGATAAAAAATGTATTAGTAATGCTGAATCTAATGAAGTAGATAAAAATAAAGTAATTCAAGACATTGATATTGAAAACGAAAGAAATAGTCATTCAGAGACTCAAAATGTAATAAAATATGATGATAAAAACGAAAAAAATAATGATCTCAAAGTAACTGAAGAAAAAGATCTAAATTTCGCTGAAAAATCCACAAAAAATCTAATACAAACTAATAAAGATGTTGAAGATGAACTATCTCATAATACAGATACTATACTCACAGGAGAGAAAGTAACAAATAGATTTCGCTTACGTTCTGATTCTAATAAGAAAAGTTTTGACGATCAACTTTCAAATAATGTTGAAACTAAAAATGTTGAGGAATACAGGAAAATAAAGCTTAATACACATCAGTGCTACGTTTGCTTTAAGCTATTCCCATCAAAAGAGGAGTTATTAGATCACTGCAAAGACCATTTCGAAGTTTGCAACTCAACCATCCTTAAAAAATGTCCTTTCTGCGATTTTGCAACAAAAAATAATATAGTTCAACATATGAAAATTGAACACGATGTAGATATAACTATACCTAGTACTAGAATAATTGATAAAAAGTCGGATAATGGTCCTGGGTATTGTTATAAAGTTGATAGTGCAACTATTAGTGATATAGATGTTATACCAAGTGTAAAAAATTTAAATAAACAAGCATATATCGCGTTAGATAAGAAAAATAGGAAGCTTAAAGATACAGGAATCGCGAAAACTAAGCTAATAAAGAAAGGAAACGAATGGATTGTAGAAAGAAAGATGACGAAAATAGATAACGTTGACGATTTTATTCTACCCGAGTTTGATGTCGATGAAATACTATCGATTAAAATAGATACAAATGATTATTTGAGTAGGATGAAGAAGCTATATCGGTTAGCGAATAAATATAAGAGAAAGATGCTGTTTCCTTGTGAGAATTGTGATAAAATTTGTCAAACGCTATCCGCTTTGAAATTACACTATCGGAGACATGATCCGAAGTCAAAACCGTTTAAAAAGAAAGTCTGGAAACATAAAATAAAGGACACAGTGCAGCCAAGAAAAAATGTAACAGATATCGATTACGGCAACAAAAAATATGCTCGAGTTGTTGAAATCGATAAGAATAACGCTCCAATCGATAATAAAACTAACAATAATCGATACGAAAAGCCCAAACCAATAGTGAACAAACATAAATGTGATCCACAACTTATAAAATTTTACGAAACGAATATCCAAGGGGGCGATATAGAATTCTGGCAGTTTTTGAAAATTTTCAACAAAATGTCGCGAGAGAATGTTAATGATTTTGATGATTTAGACGAAAGACATGAATTTGGGATACATTTTAATAATAAAAAAGCTGATACAGATACTGAAAATACCACAGATATTAGTAACACTAAAATGAAAGATAATAATAAAAGAAATATAACTAATAACATCGCTAAATATAGAACTAAACAAACAGCTAATATAGCAAATAGTAAATTTAAAAGAACTGTTAGAATTAGCAAAAAAGATTATCAGAAAAGAAATGATTTAAAACAAAGATTAAGAGAAAAGATTGCAAAAGAAAGTCTTAAAACTGTGTAA
- Protein Sequence
- MAKIKNTAKPEKEIKKKKKFKAKHFPCSYCSKTFQERGNRDQHMLLHSSEKPFACTLCSHTCKTKKYLARHVRVVHNPPTSYKCEYCDKMFHYKCVLDKHRVIHTNARPYKCKDCGKGFNSGYSLKSHVLIHKDLKPFKCKYCEYACRDNSTLRRHEERHRGIVTKYHCNICDKEFSKKQTLQYHVAEVHMKVNLKKIPCEQCDSMFRTNKTLMIHIEVKHNRKFATNCEICGLKLANKYNMNTHLMTHVDVKPYKCAFIGCEKRYKSKSTLQKHTIIHYPERQFPCKICGKKFTRKIRLKKHKKQHVVRVKNVQCDYCGVHFYNKNYLTLHIRRKHCGRKIKYICDMCDFASGNKPGLIVHIKSHYMKLNKECPICAKKYKEHKWLKLHLWQAHKVKESNVSATFETDIKVEPLDVDGTPEFELFEIEKEEIVDELQSLNNYTNKEQNIATDTITDKSNVGEEANESIHLNADSEILQDSEISRSNETFPTVVLEKNNTQIPRHTTVVLQDIIKENTRKSAKEVFVNENVICSHNATDKIVNTDNVIIESENLGNDDNEKSIPFSNGVLTDNDVANIKDIENDDQQSLDINSTKSVKQIDKFQTANGKYLQTETLIHKDNSKRKTLAHIKSKLEEKKIRVKARNNLSNLNIRRSKRKNLAQIKAALLEHSENNTGINPEISSETEDKEGLEYSRAVLSEDITRFMTQKKNKDSSEMNFDDFFIKHIVERQDETSKNTLEIDKDCESYAKDYIGKLLAKRRNENEVKFIEKTRQQYNERIRRAKKLRPEKIAIKYLDKKCISNAESNEVDKNKVIQDIDIENERNSHSETQNVIKYDDKNEKNNDLKVTEEKDLNFAEKSTKNLIQTNKDVEDELSHNTDTILTGEKVTNRFRLRSDSNKKSFDDQLSNNVETKNVEEYRKIKLNTHQCYVCFKLFPSKEELLDHCKDHFEVCNSTILKKCPFCDFATKNNIVQHMKIEHDVDITIPSTRIIDKKSDNGPGYCYKVDSATISDIDVIPSVKNLNKQAYIALDKKNRKLKDTGIAKTKLIKKGNEWIVERKMTKIDNVDDFILPEFDVDEILSIKIDTNDYLSRMKKLYRLANKYKRKMLFPCENCDKICQTLSALKLHYRRHDPKSKPFKKKVWKHKIKDTVQPRKNVTDIDYGNKKYARVVEIDKNNAPIDNKTNNNRYEKPKPIVNKHKCDPQLIKFYETNIQGGDIEFWQFLKIFNKMSRENVNDFDDLDERHEFGIHFNNKKADTDTENTTDISNTKMKDNNKRNITNNIAKYRTKQTANIANSKFKRTVRISKKDYQKRNDLKQRLREKIAKESLKTV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -