Basic Information

Insect: Lerema accius
Gene Symbol: -
Assembly: None
Location: scaffold9289:4056-12226[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 28 3.2e-06 0.0002 21.6 2.7 1 23 198 220 198 220 0.98

2 28 0.0015 0.092 13.2 1.0 3 20 252 269 252 271 0.95

3 28 1.3e-05 0.00083 19.6 0.2 2 23 296 318 295 318 0.96

4 28 0.0033 0.2 12.1 0.9 1 23 373 395 373 395 0.97

5 28 0.056 3.5 8.2 0.1 1 23 413 435 413 435 0.95

6 28 0.00022 0.014 15.8 1.9 2 23 473 494 472 494 0.96

7 28 0.00016 0.01 16.2 2.0 2 23 537 559 537 559 0.97

8 28 0.0023 0.14 12.6 1.1 1 23 609 632 609 632 0.95

9 28 0.0034 0.21 12.0 0.1 1 23 689 711 689 711 0.97

10 28 0.0026 0.16 12.4 7.4 1 23 722 744 722 744 0.99

11 28 0.059 3.7 8.2 1.7 2 23 756 777 755 777 0.96

12 28 0.0042 0.26 11.8 0.7 1 23 787 809 787 809 0.98

13 28 0.017 1 9.9 6.9 1 23 838 860 838 860 0.96

14 28 0.00064 0.039 14.4 1.8 3 23 873 893 872 893 0.99

15 28 1.7e-05 0.0011 19.3 0.9 1 23 901 923 901 923 0.98

16 28 0.0022 0.14 12.6 0.3 2 23 943 965 942 965 0.97

17 28 1.1 68 4.2 1.0 1 23 983 1005 983 1005 0.91

18 28 0.094 5.8 7.5 4.1 1 23 1012 1034 1012 1034 0.97

19 28 0.012 0.77 10.3 3.7 3 23 1046 1067 1044 1067 0.93

20 28 0.002 0.12 12.8 0.3 1 23 1089 1111 1089 1111 0.97

21 28 8 5e+02 1.4 3.9 2 23 1154 1176 1153 1176 0.94

22 28 0.0017 0.1 13.0 1.7 2 23 1192 1213 1191 1213 0.94

23 28 5.8 3.6e+02 1.9 3.9 5 23 1223 1241 1220 1241 0.92

24 28 0.012 0.73 10.4 0.8 2 23 1252 1274 1251 1274 0.95

25 28 0.37 23 5.7 2.6 2 23 1291 1309 1291 1309 0.89

26 28 0.11 6.6 7.3 0.5 2 23 1384 1405 1383 1405 0.93

27 28 0.0021 0.13 12.7 0.6 2 23 1416 1438 1415 1438 0.96

28 28 1 64 4.2 4.3 2 21 1476 1495 1475 1496 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	28	3.2e-06	0.0002	21.6	2.7	1	23	198	220	198	220	0.98
2	28	0.0015	0.092	13.2	1.0	3	20	252	269	252	271	0.95
3	28	1.3e-05	0.00083	19.6	0.2	2	23	296	318	295	318	0.96
4	28	0.0033	0.2	12.1	0.9	1	23	373	395	373	395	0.97
5	28	0.056	3.5	8.2	0.1	1	23	413	435	413	435	0.95
6	28	0.00022	0.014	15.8	1.9	2	23	473	494	472	494	0.96
7	28	0.00016	0.01	16.2	2.0	2	23	537	559	537	559	0.97
8	28	0.0023	0.14	12.6	1.1	1	23	609	632	609	632	0.95
9	28	0.0034	0.21	12.0	0.1	1	23	689	711	689	711	0.97
10	28	0.0026	0.16	12.4	7.4	1	23	722	744	722	744	0.99
11	28	0.059	3.7	8.2	1.7	2	23	756	777	755	777	0.96
12	28	0.0042	0.26	11.8	0.7	1	23	787	809	787	809	0.98
13	28	0.017	1	9.9	6.9	1	23	838	860	838	860	0.96
14	28	0.00064	0.039	14.4	1.8	3	23	873	893	872	893	0.99
15	28	1.7e-05	0.0011	19.3	0.9	1	23	901	923	901	923	0.98
16	28	0.0022	0.14	12.6	0.3	2	23	943	965	942	965	0.97
17	28	1.1	68	4.2	1.0	1	23	983	1005	983	1005	0.91
18	28	0.094	5.8	7.5	4.1	1	23	1012	1034	1012	1034	0.97
19	28	0.012	0.77	10.3	3.7	3	23	1046	1067	1044	1067	0.93
20	28	0.002	0.12	12.8	0.3	1	23	1089	1111	1089	1111	0.97
21	28	8	5e+02	1.4	3.9	2	23	1154	1176	1153	1176	0.94
22	28	0.0017	0.1	13.0	1.7	2	23	1192	1213	1191	1213	0.94
23	28	5.8	3.6e+02	1.9	3.9	5	23	1223	1241	1220	1241	0.92
24	28	0.012	0.73	10.4	0.8	2	23	1252	1274	1251	1274	0.95
25	28	0.37	23	5.7	2.6	2	23	1291	1309	1291	1309	0.89
26	28	0.11	6.6	7.3	0.5	2	23	1384	1405	1383	1405	0.93
27	28	0.0021	0.13	12.7	0.6	2	23	1416	1438	1415	1438	0.96
28	28	1	64	4.2	4.3	2	21	1476	1495	1475	1496	0.93

Sequence Information

Coding Sequence: ATGGCACTCAAGTTGGGAAAATGTAGGCTCTGCCTCAAGCTTGGCGACTTCTACTCCATCTTCACGATGGATAACAATTTGCAGCTCGCCGAAATGGTTATGGAGTGCACCAAAGTTAAAGTTTACGAAGGCGACGGTCTCCCGGACAAAATCTGCTCAGAATGTATCCAAAAGCTCAGCAGCGCTCATATTTTCAAACAGCAATGTGAGAGAGCGGATGAAGAGCTCCGGCGAAATTACGTTCCACCGCCAGGATTCAGTATCTCTCCACCACCAGCTGCCAATAGACAAAGCAGCGATTCGGCTTTTTCTAATAATACTGATGTATCTAATAAGCCTTCACCGTCTACTGAAACAATACCCACACCAATCAGTCGGAATCGGAAGAGAAGCCGAGAAAGCTTAGACGATGCTTCTACGAGTAGCCAGTCTCACGACCCTCGCCCCGGACCCACTAAACGCGTTCAGGAACTTAGAAAACCTATTAAGTCCCAAAAGCGCCTGAAAACTAGTTACTACACGGATTCTGATTACGAATACAACAGCCCATCACAATTTTCTGTCGAAACCGACTCCGACGACTTCCTAGAGCACCGATGTAAAGAATGTGACAAACGTTTCGATTCTAACAGAGGACTAATGAATCACATGAGGATACACGAAAGAGCAACGAAACAGGAAAGTTTTAGTGAACATGAAATTACTACTCCTAAAAGTTCTGAGGACGCGACCGACGTAGATGATAAGCTGGGCTGCGAAAAATGTGGGAAAACGTTCAAACTGAAGATAATGCTAAAACGTCACCACGATATATGCACCTCGCCACCCTTGAAAGAGCTCAAAGTGTCACTAGAACCAATAGATGGAAAGGTCGCGACGAAAATAGAATGTGAAATATGTAACGCGAAATTTAAAACGTCAGATAATCTTGATAAGCATTTGCGAGTGGTTCACGCTGCCGCACCTAAGAAAGAAAAAGTTGCCCAGCCTCAGACCCCACCAGCAGAAAACGGTAGAATCATATTACCGTGCATGTACTGCAGAAAGCCGTATAATGATTACTATTCTCATAACGCTCATTTTAACGCGTGTTGTAAAGGGAAGTATACTGGGTGTTTCGAATGCCCCTTATGTCACAAAATGGTAGTTAAAAAAGCATCTTATTTCTTACATATTAAGGCCCACTTTATGCAAACGATTCCGACAACTCCATTATCTGCGGAATCTCGTAAACAATACAATTGTCGGATTTGCAGGAAAAAATTGCCTTCTGAAGAAGAACTTGTGACTCATTTAGCAGCGCATATGTCTAATATAGACGACCCTGATGATGATGGATCAAGGGCCAGTACACTGGATGATTCAGCATCGATACAGTCAGAATATAGTAATTCTAAAATTACAACTGGTCCATTGAGTTGTCACATTTGTGACAAGAAATTTACTTACAAAAAAGCTTTAGATTCGCATGTTGCGAAACATTCACAAACAGAAGTGAATGTCAAAACTGAACCTCCGGATAAAAGTTTCAATGAATCATCAGAACTGTTGACGGAAGCGGCACAGCAGTCAGAATCAGAGTCTAGTCAAGACGAGGGAGACGATAATACATGTGATATTTGCGAGAAACAGTTCTCGTACAAGAGGCTTCTGATACAGCACAAGAGAACGAAGCATCCGATGACGGCAGGGACGAAGCGAGCGAAAGTCAATCTCAAAGACTGCTCCGTGCGATGCCTCATCTGCGACATCGAGATGAAAGTGAGCGCAATAAACGAACACAATCAAACTCATATAACGAAGAACATAAAGCCGAGGAATCTCTACACCTGCATAATTTGTGAAGAGAAGTTCAAGAGCTGCAGTTCGTTGGCGAATCATATAAAGTTAGTGCACCGGCTGAAGCAGCAGTCGTCGAAGAAAATGACGACTATTGCGCCGGACCTGGCGGATTTTTGTGAAGTCGTTGTGACAAAGGCGGAACCCCTGGACGCGCTCCAGAGTCACAACGGCTTTGGTGAGGTTTCCGCCTACGAAGGGAAGCCGCTGGTCAATCTCAGCGGCTTCACTTGTCCCATCTGCAACAAACAGATGCCTACCTTGATTTCACTCAACAGACACGTCAATTGGCATACTAATGTCGGTAACAATATCGAGAAGAAATACGAATGCTTCGTTTGTAAAGAGACATTCCGGTTTCAGTGCCACTATAAAATGCACATGCGAGTCCACTACCACGATACTAATTTGGATCCAAAACTTCTAACCTGCTCCATCTGCAATCGCAGAAGCAAACACTTGCGCGCCGCGCAGGCGCATATGAACTTCCACAAGCAGACGCGCTTCAAGACAAAAGACTACGAGTGTTCCATTTGCAAGAGAGTATTCCAATACCGAAAGGTGTACCTCTCTCACATGGCGATACATTACAAGCGAGGCGACAGTGCCAACAACACTATCGTGGGCTCCGAGCTTCCTACGACAGCAGACAGAACCATATTCGACGGGACACACACTTGTCACATATGCAGGAAAGTTTGCGATTCCGAAACATCTCTTAAACATCATATCATCTGGCATAACTCAAAGACTTCCCTGTATGGCAATCGCCACGGATGCCACATATGTGACCTGCAATTCACGAACAAGAAACGATTGGAGCTTCATATCCGACTACATTATGAAGATGAAAACGGGCCATATAAGTGCACAATATGCGGCAAGGGTTACACGGATGAAGACTTCTATAAACGTCACCTAAAAGCTCATAACTTTGATCATCAGTCTCATAAGAAGCGCATAGAAAAATTGAGAAAAGATAAAGTGAAGTGTCCAATATGCTCACGATACTACCCGGATCTCTTGAAGCTCATTAGACATTTGAGGCGGACACATCCAGAAAGCAAGATGATCAAGGAGGACCCGGACGCTCCGCCCCCTGCTTACTTTTCGTGCAAGTTGTGCGCCAAGGTGTTCCTCGACGAACGACGATTGCAACACCACGAAGAGGCTCATCTCAGGAAGCCGGAGTTCTTCAAATGTAAATTTTGCGGCAAGAAAACGATTTCGCTAAAAAATCACAATAATCACATCAAAGGCCATTTGGCACAGAAATTTTTGGACAAACCGCTCGATTGCCCTCATTGTGATCAGAAATTTACTAAAGGGTGGTATCTTCATCACCATCTTCGCGACGCCCACAACATTAACGAAACTTGGATCGCGGAGCGGACGACGCAAACGTTAGACGGTCCGTTGAAGGAGTTCCAATGCTCCGTCTGCCTCAAAATATTAGCCAGCAAGGGCAACTTCGAGAGGCACATAGATTATCACAACTCTTTGAGATGCAACTATTGCTTCGATTACTTTAGCTCGTTAAGATTTTTGGAAGGTCATTTAACGTTCAGTTGCGAGAAGAAGAAATTGATAGGAGATACAGAAATTTATCCGAGAAGGATAAAGTGTCAGGTGTGCTACAAGGCGTTCCATTTACAAGTGAAATTGGATTGTCATTTACGGACACAGCACGGAATCAAGGTGTTCAAGGAAGCCTCGGAAGGCAAGAAGGATTGCGTGTGCGACTACTGTTTTAAAGTTTTCGAAAACGAATACGCGCTGAACACACATAAGATCTATCATCGCACGATCGGTTACTACGGCTGCATCTACTGCGAGCGGAAGTTCAACACCATGACCACGTATCGGAAACATAAAACTCACCACTTTTCACAGCTGAATGTCGACAACCCGACAAAATGCGAGCATTGCGACGAAACTTTTGTAGCTTTCAGAGAGATGATATACCACATGAGAGACGTCCACGGTGACGATAAGGAGTGGATAACATTACCCAAGGAGGCTGTTGAAGAAAAATGCCCTATTTGCAACAAGATATTCTTCAATCTGCATAGGCATCTCGACTACCACGAAGAAAACAGGTGCAGAAAATGTAACGAATACTTCTTATCCCACGTGGACTATGATAATCACTTGTGCGCCATCGACTCTGATGACGATGAAGCCATGAACACCAGCGCCGGTAATGGCAATACGCCTAAATACGAAGAGTGTCGCTTCTGCTTCAAACCCATTACCAAAACGAGCTCCAAGCTCAAACACGATCAAATCCACAAAAGTTCCGGCTCTATTTCTTGTCGGTTCTGCGATTTGAAGTTTAAAACTATAGACGCATTTAATATTCACGCATTTTCACACCGCAGTAGAAAATATAACAAGAAGCCGATAAAATGTCGAAATTGCGGGGAGAAGTTCGTGAAGTATGGTCCCTTTATGAAGCACATGAAAAGTGTCCATAAGAATATGAAGAAACTTCATTATCGGGCGGTGGTGAAAGAGGAGGAATGCGTGATTTGCGGAGACTTATTCCCGAACCTCCATAACCATTACCGTGCCCACCTGCAGAATCAGTGTCAAATGTGTCACAAGTACTTCACGTCGTTTAGGGTGTTTTCAAAACACATTTGTGACAAGGAAGACATAGATCCAACAAAAGTGTTCACCAGTGACGTGGATTTGCCGGCGCTCATCAACTCGTATGCTCCCAAAGACGAGAAAGACGATGAGAAATATTACGGGTATACCGATGACGAGGAAGAGGTACCGGAAGCGGATGCTGAAACTGAAATGGCGAATGAGAAATCAGAGAGCAAGGTTCGGGAGTATAAACCTATAGTTTTCGACGAGTCCAGTCAGATAACACTGGACGATGACAGTCAAAATTCTGTGGACGAAGAAGAAAGTAACTTACACTCGATGGTCCACGCCCCTATTATATCAGATGTATTGTCCCTTTATCAGAAGAAGGAAGTGGTAGAAGCCGCTGAGCAGGAAGCAGACGATGACGTGGTTAATTTAATTGACGAGGATTCTGTGGGATTTGAGGAAAATATTTTAACAGTTATAACGATCGAAGACTAA
Protein Sequence: MALKLGKCRLCLKLGDFYSIFTMDNNLQLAEMVMECTKVKVYEGDGLPDKICSECIQKLSSAHIFKQQCERADEELRRNYVPPPGFSISPPPAANRQSSDSAFSNNTDVSNKPSPSTETIPTPISRNRKRSRESLDDASTSSQSHDPRPGPTKRVQELRKPIKSQKRLKTSYYTDSDYEYNSPSQFSVETDSDDFLEHRCKECDKRFDSNRGLMNHMRIHERATKQESFSEHEITTPKSSEDATDVDDKLGCEKCGKTFKLKIMLKRHHDICTSPPLKELKVSLEPIDGKVATKIECEICNAKFKTSDNLDKHLRVVHAAAPKKEKVAQPQTPPAENGRIILPCMYCRKPYNDYYSHNAHFNACCKGKYTGCFECPLCHKMVVKKASYFLHIKAHFMQTIPTTPLSAESRKQYNCRICRKKLPSEEELVTHLAAHMSNIDDPDDDGSRASTLDDSASIQSEYSNSKITTGPLSCHICDKKFTYKKALDSHVAKHSQTEVNVKTEPPDKSFNESSELLTEAAQQSESESSQDEGDDNTCDICEKQFSYKRLLIQHKRTKHPMTAGTKRAKVNLKDCSVRCLICDIEMKVSAINEHNQTHITKNIKPRNLYTCIICEEKFKSCSSLANHIKLVHRLKQQSSKKMTTIAPDLADFCEVVVTKAEPLDALQSHNGFGEVSAYEGKPLVNLSGFTCPICNKQMPTLISLNRHVNWHTNVGNNIEKKYECFVCKETFRFQCHYKMHMRVHYHDTNLDPKLLTCSICNRRSKHLRAAQAHMNFHKQTRFKTKDYECSICKRVFQYRKVYLSHMAIHYKRGDSANNTIVGSELPTTADRTIFDGTHTCHICRKVCDSETSLKHHIIWHNSKTSLYGNRHGCHICDLQFTNKKRLELHIRLHYEDENGPYKCTICGKGYTDEDFYKRHLKAHNFDHQSHKKRIEKLRKDKVKCPICSRYYPDLLKLIRHLRRTHPESKMIKEDPDAPPPAYFSCKLCAKVFLDERRLQHHEEAHLRKPEFFKCKFCGKKTISLKNHNNHIKGHLAQKFLDKPLDCPHCDQKFTKGWYLHHHLRDAHNINETWIAERTTQTLDGPLKEFQCSVCLKILASKGNFERHIDYHNSLRCNYCFDYFSSLRFLEGHLTFSCEKKKLIGDTEIYPRRIKCQVCYKAFHLQVKLDCHLRTQHGIKVFKEASEGKKDCVCDYCFKVFENEYALNTHKIYHRTIGYYGCIYCERKFNTMTTYRKHKTHHFSQLNVDNPTKCEHCDETFVAFREMIYHMRDVHGDDKEWITLPKEAVEEKCPICNKIFFNLHRHLDYHEENRCRKCNEYFLSHVDYDNHLCAIDSDDDEAMNTSAGNGNTPKYEECRFCFKPITKTSSKLKHDQIHKSSGSISCRFCDLKFKTIDAFNIHAFSHRSRKYNKKPIKCRNCGEKFVKYGPFMKHMKSVHKNMKKLHYRAVVKEEECVICGDLFPNLHNHYRAHLQNQCQMCHKYFTSFRVFSKHICDKEDIDPTKVFTSDVDLPALINSYAPKDEKDDEKYYGYTDDEEEVPEADAETEMANEKSESKVREYKPIVFDESSQITLDDDSQNSVDEEESNLHSMVHAPIISDVLSLYQKKEVVEAAEQEADDDVVNLIDEDSVGFEENILTVITIED

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -