Basic Information

Insect: Lerema accius
Gene Symbol: -
Assembly: None
Location: scaffold514:107748-113983[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.0087 0.54 10.8 4.5 1 23 136 158 136 158 0.98

2 12 0.0029 0.18 12.3 1.2 1 20 163 182 163 184 0.94

3 12 3.4e-05 0.0021 18.4 2.7 1 23 213 235 213 235 0.98

4 12 9e-06 0.00056 20.2 2.5 2 23 248 269 248 269 0.97

5 12 6.9e-08 4.3e-06 26.8 2.0 1 23 275 297 275 297 0.99

6 12 1.3e-06 8e-05 22.8 4.8 1 23 303 325 303 325 0.97

7 12 3.8e-08 2.3e-06 27.6 0.6 1 23 331 353 331 353 0.95

8 12 4.7e-05 0.0029 17.9 1.2 1 23 359 381 359 381 0.96

9 12 5.3e-07 3.3e-05 24.0 0.1 1 23 387 409 387 409 0.98

10 12 0.00055 0.034 14.6 6.9 1 23 415 437 415 437 0.98

11 12 2.7e-06 0.00016 21.8 1.1 1 23 443 465 443 465 0.99

12 12 4.6e-05 0.0028 17.9 0.6 1 20 471 490 471 493 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.0087	0.54	10.8	4.5	1	23	136	158	136	158	0.98
2	12	0.0029	0.18	12.3	1.2	1	20	163	182	163	184	0.94
3	12	3.4e-05	0.0021	18.4	2.7	1	23	213	235	213	235	0.98
4	12	9e-06	0.00056	20.2	2.5	2	23	248	269	248	269	0.97
5	12	6.9e-08	4.3e-06	26.8	2.0	1	23	275	297	275	297	0.99
6	12	1.3e-06	8e-05	22.8	4.8	1	23	303	325	303	325	0.97
7	12	3.8e-08	2.3e-06	27.6	0.6	1	23	331	353	331	353	0.95
8	12	4.7e-05	0.0029	17.9	1.2	1	23	359	381	359	381	0.96
9	12	5.3e-07	3.3e-05	24.0	0.1	1	23	387	409	387	409	0.98
10	12	0.00055	0.034	14.6	6.9	1	23	415	437	415	437	0.98
11	12	2.7e-06	0.00016	21.8	1.1	1	23	443	465	443	465	0.99
12	12	4.6e-05	0.0028	17.9	0.6	1	20	471	490	471	493	0.94

Sequence Information

Coding Sequence: ATGTTAGAGTTATCAACAACTTGTCGTAGTTGTATGAAGAGCGACACAGAATTGGTCGATTTGTTCGTCCCTCTGAATGATGATAATTGCAATTTGCAGTTAGCTGAACTGCTTATGACGACTGTTTCAATTGAGGTTAGGAAAGAAGATGGATTGCCTCAAAATGTATGTAATAAATGTGTATGTTTCCTCCAGTCTGTACACATGTTCCGCAGTACAGCTCTATCAGCTGACTGTGAGCTCAAAAAGCTGTTTCTCGCTCAAACAGAGGTCAAAGATGAAGTGGATTTGAAGAGTGAAGGAATACCCGATTATGACGATGACTTTAATGATTATGCTCAACATGATGTTGTACTCAAAGAAGAGGCTCAAGAACCTGAAATGAAGCAAGAGTATCAAGAACTGTATGTATGTAATATATGTCACAAAGGTTACACAGAACACAGTCGATATTTGAAACATGAATCCACTCACTTGCAGCCCAAGTTTTCTTGTAGTGCATGCAAGAAATCTTTCAATAAAGAATCCTCAGTAAATAAGCATATATTTAAGAAATGCAAAGGTGCTACGGTTTTGTGTGATACTCAGCAAAGTGCTACAGTATCGGTGAAGACGGAGGATGATGATGATGACTTATTTAGGTGTTCATATTGTCCGCTGACCTTTACTAAATCAAGATCACTCTCATCACATGTAAAGAAACACAAGAACAAAAGTAAGCATAAATCTATAGTTATGAACCGATGTGACTATTGTAGCAAAGATTTCACAATGAAGTCTACACTTAAAAGGCATATTAAGCTACATTTGACTGAGCAGAGCTACAAATGTCCTACTTGTTCAAAGAAGTATTCAAGACAAGATCAATTGGAGGAACATATGCGGAAACATTCTGGACTTAAGCCACATCCCTGCCCACATTGTGATAAAGCTTTCTCTCAATTATGCAGTTTGAAGGATCACATCAGAACCCATACGAAAGAAACCCCATTTCTATGCCCTCAATGTGGCAAGGGGTTTACAAACAGCTCCAATTTACGTCAACACATATTACGACATTCTGGCAACAAGCCCTTTGCTTGCAATTTCTGTCCTAAAACATTCTATACAAAAGGTCAAATGAAGACTCATGTTGGGACACATACGGGCGCTCATCGCTACGAGTGTCCCGATTGTGGGACAGCGCTGACCACGCCAAGTTCACTGAAGAAACACCGCCTCATACATCTAGGAATCAAACCATATGCTTGTGATACTTGTAATTACAAATTCACGTGTAAAGACCACCTGAAGCGTCACCAACGTATCCACACGGGTGAGAAGCCGTACCGCTGCGCGCACTGCGAGCGAGCCTTCGCGCAGAGCAACGACCTCGTTAAACATCTGCGCTCGCACGTCGGACAGAACATTTACCAATGTACGATATGTGATATGAAATTCCGTCTTCTTAGCGAATTGAAACGTCACTATCCAATTCACTACGTCAATGGTAACAATATAGAACAACTGCCGTCCGACCAGTCTGTCATACTAGACAAGCCACATGAAGAAATCACTCTGAACAAACACACCGACAATCAGATCACTATAACATTTAATAGTAATGTTTTGGACAAAAATATGGCCGGAGATATTACTATTAATATATCACCCACTAAAACTTAA
Protein Sequence: MLELSTTCRSCMKSDTELVDLFVPLNDDNCNLQLAELLMTTVSIEVRKEDGLPQNVCNKCVCFLQSVHMFRSTALSADCELKKLFLAQTEVKDEVDLKSEGIPDYDDDFNDYAQHDVVLKEEAQEPEMKQEYQELYVCNICHKGYTEHSRYLKHESTHLQPKFSCSACKKSFNKESSVNKHIFKKCKGATVLCDTQQSATVSVKTEDDDDDLFRCSYCPLTFTKSRSLSSHVKKHKNKSKHKSIVMNRCDYCSKDFTMKSTLKRHIKLHLTEQSYKCPTCSKKYSRQDQLEEHMRKHSGLKPHPCPHCDKAFSQLCSLKDHIRTHTKETPFLCPQCGKGFTNSSNLRQHILRHSGNKPFACNFCPKTFYTKGQMKTHVGTHTGAHRYECPDCGTALTTPSSLKKHRLIHLGIKPYACDTCNYKFTCKDHLKRHQRIHTGEKPYRCAHCERAFAQSNDLVKHLRSHVGQNIYQCTICDMKFRLLSELKRHYPIHYVNGNNIEQLPSDQSVILDKPHEEITLNKHTDNQITITFNSNVLDKNMAGDITINISPTKT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01082658;
90% Identity: -
80% Identity: -