Basic Information

Insect: Lerema accius
Gene Symbol: -
Assembly: None
Location: scaffold325:220928-237540[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 6.1e-05 0.0038 17.5 1.5 1 23 406 428 406 428 0.96

2 16 0.0021 0.13 12.7 0.6 1 20 434 453 434 456 0.94

3 16 7.9e-05 0.0049 17.2 5.3 3 23 477 497 475 497 0.97

4 16 2.6e-05 0.0016 18.7 4.6 1 23 503 525 503 525 0.99

5 16 2.6e-05 0.0016 18.7 5.3 1 23 531 553 531 553 0.97

6 16 7.2e-05 0.0045 17.3 6.7 1 23 559 581 559 581 0.97

7 16 7.2e-05 0.0044 17.3 6.5 1 23 587 609 587 609 0.97

8 16 3.5e-07 2.2e-05 24.6 1.9 1 23 615 637 615 637 0.98

9 16 3.5e-05 0.0022 18.3 7.9 1 23 643 665 643 665 0.98

10 16 5.6e-06 0.00035 20.8 6.6 1 23 671 693 671 693 0.98

11 16 1.4e-05 0.00086 19.6 4.5 1 23 699 721 699 721 0.98

12 16 7.5e-05 0.0047 17.3 5.3 1 23 727 749 727 749 0.96

13 16 8.5e-05 0.0052 17.1 7.5 1 23 755 777 755 777 0.97

14 16 2.2e-06 0.00013 22.1 6.0 1 23 783 805 783 805 0.98

15 16 2.9e-05 0.0018 18.6 10.2 1 23 811 833 811 833 0.97

16 16 3.9e-05 0.0024 18.2 4.8 1 23 839 862 839 862 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	6.1e-05	0.0038	17.5	1.5	1	23	406	428	406	428	0.96
2	16	0.0021	0.13	12.7	0.6	1	20	434	453	434	456	0.94
3	16	7.9e-05	0.0049	17.2	5.3	3	23	477	497	475	497	0.97
4	16	2.6e-05	0.0016	18.7	4.6	1	23	503	525	503	525	0.99
5	16	2.6e-05	0.0016	18.7	5.3	1	23	531	553	531	553	0.97
6	16	7.2e-05	0.0045	17.3	6.7	1	23	559	581	559	581	0.97
7	16	7.2e-05	0.0044	17.3	6.5	1	23	587	609	587	609	0.97
8	16	3.5e-07	2.2e-05	24.6	1.9	1	23	615	637	615	637	0.98
9	16	3.5e-05	0.0022	18.3	7.9	1	23	643	665	643	665	0.98
10	16	5.6e-06	0.00035	20.8	6.6	1	23	671	693	671	693	0.98
11	16	1.4e-05	0.00086	19.6	4.5	1	23	699	721	699	721	0.98
12	16	7.5e-05	0.0047	17.3	5.3	1	23	727	749	727	749	0.96
13	16	8.5e-05	0.0052	17.1	7.5	1	23	755	777	755	777	0.97
14	16	2.2e-06	0.00013	22.1	6.0	1	23	783	805	783	805	0.98
15	16	2.9e-05	0.0018	18.6	10.2	1	23	811	833	811	833	0.97
16	16	3.9e-05	0.0024	18.2	4.8	1	23	839	862	839	862	0.96

Sequence Information

Coding Sequence: ATGAATCAAGAGCATCACAATATCAATACGGGTGGTGGCCAGCCCCCTGGCAATTCGGAGTCGCAGAGCCAAAGAGTGCAATCTGCGCAACAACAGCAGCAAGGCTCTAATTTGCCTCCGACAACGTCAGCGACCGACTTGCGAGTTAACTCAGCTGCCGTAAACGTTGCATTGTCGAGCGTTGCCAAGTATTGGGTGTTTACAAATCTATTCCCCGGACCATTACCACAAGTGTCCGTATATAATTTACCTACAAATGCAAGAATAGAAAATGGGAAACCAGTTCAGCTATTACAGGACCTCGGTCAGACGCACGGTATACTTAATGGTGATCCAAATATCATACTCGGACACCATGCAGGTCAGCCACAGGTCACTGTTTCGGCAGCAGGGCAGCAGATACCTGTTCCGCAAATTATTGCCACCCAATCTGGACAAACTCATGAAGCGCTAGTGACACACGGTCAGCAACAGGAGTTGACAACACAGCAATCTTCCAGTGCGGCTCAGGTTTCAGTTAGCGGGAGTCAGAGCTCACACCAGCAGGTACCCAATAACAGGGTCGAATTTGTACAACACCATAACATTGATATGGGTCATCATTCACAACAACAACACTTGCTTCAACAACAACTGTTGGCGGCTGCGAGACCGGACCACGCCAATCAACAGATTCAACTGACGGTCAGTGAAGATGGGATTGTAACAGTGGTAGAGCCGGGAGCCGGCAAACTAGTGGACAAAGAGGATCTTCATGAGACTATAAAGCTGCCCACCGACCACACCCTCACTGTACATCAGTTGCAACAGATTGTGGGGCATCATCAGGTAATAGACAGTGTGGTTCGTATCGAGCAGGCTACGGGTGAGCCGGCGAACATTCTAGTGACTCAAAACCCCGATGGAACCACGTCCATAGAAACAAGTGCTGCCGATCCACTGGCTATAGTAAAAGACGAGAAGGCCGTCGCTAAGATAGAAGGCGCACAGTTCGCCATACCTGCTGAGATTAAGGAGATCAAAGATTTAAAGAGTGTCGGAGCGATGGGAATGGAAGTCAATGTGGAGGATCTGTCGCAACTGCTCGCCTACCACGAGGTGTTCGGGAAATTGAACACAGAAGGGCAGCAACAACAGGCTAAGGTGATCACTGAAGTAGAGACCGAAGCCAGTACGAGCGCAGCGATGTCCGAAGCGGACTCGTCGCCGGGCCACCACGCTTGTGACATATGCGGGAAGATATTCCAATTCCGTTACCAGCTTATCGTTCATAGACGATATCACGGAGAAAGCAAACCTTACACCTGTCAGGTCTGTGGGTCCGCATTCGCGAATCCTGTAGAATTATCAAGACATGGAAAATGTCACCTGGCAGGAGATCCAGCTGAAAGACAAACTAAGCGGCTGACACAGGACAAGCCATACGGATGCTCCACCTGCCATAAAACATTCTCCAGGAAGGAACATCTTGACAACCATGTGCGGAGTCATACTGGGGAAACTCCATACAGATGCCAGTACTGCGCGAAGACGTTCACCCGCAAGGAGCACATGGTGAACCACGTGAGGAAACACACGGGCGAGACGCCGCACCGCTGCGACATCTGCAAGAAGAGCTTCACGCGCAAGGAGCACTTCATGAACCACGTCATGTGGCACACCGGTGAAACGCCGCACCGGTGCGACTTTTGCTCGAAGACGTTCACTCGCAAGGAGCACCTGTTGAACCACGTGCGACAGCACACGGGCGAGTCGCCGCACCGGTGCAACTTCTGCTCCAAGTCGTTCACCAGACGAGAACACCTCGTCAACCACGTGAGACAGCACACCGGTGAAACGCCCTTCCAGTGCGGATACTGTCCGAAGGCTTTCACTAGGAAAGATCATTTGGTGAACCACGTGCGTCAACACACGGGCGAGTCGCCGCACAAGTGTTCGTTCTGCACGAAGTCGTTCACCCGCAAGGAGCACCTCACGAACCACGTGCGGCAACACACGGGCGAGTCGCCGCACCGGTGCACGTACTGCGCGAAGAGTTTCACCAGAAAGGAGCACCTCACCAATCATATTAGACAGCACACGGGCGAAACGCCGCACAAGTGTACGTTATGCCCGCGAGCGTTCACGCGGAAGGTGCATTTGAACAACCACGTGAGACAACACACTGGGGACACGCCGCACGCGTGCACTTTCTGCTCCAAGAGCTTCACGCGCAAGGAGCATCTCGTCAACCACGTCAGGCAACACACAGGCGAGACTCCGTTCAAGTGTACGTTCTGCACGAAGTCGTTCTCTCGCAAGGAGCATCTCACGAACCACGTTCATCTACATACAGGCGAGACACCTCACAAGTGTCCCTTCTGTACCAAGACCTTCTCACGGAAGGAGCACCTTACTAACCATGTCAGGATACACACAGGTGAATCCCCTCACCGATGTGAGTTCTGTCACAAGACGTTCACTCGCAAGGAGCACCTGACGAACCACATGAAACAACACACGGGCGACACGCCGCACGCGTGTAAGGTGTGCCTGAAACCGTTCACGAGGAAAGAACACCTGAGTACTCATATGAGACGGACGCACACGGAAGCTGCGGACGGCAGTAGCGCCGAGCCGGCCGCCGACGAGGACTGCGCCGACTGCAACAAGTGCGAGAAAGACACGACCGAACGACCCGAGCGGAAACATGACGTCAGGGCCCCTTCAGAAAACAGACCCACAGAAAGCAGTACAGCACAAACACAACAAGCCAACACAACTGTGATGCAAATCACAAGTCAACAAGTCCGCACAGCAGCAGCTAGTAACGCGACGAGCGTGGCCACGGCGACATTCACGCACACGGCGAGCCCGCAGCACCACGCCGGCGCCATCGCGCACCATCCCGTCACCGTCAACTACTAA
Protein Sequence: MNQEHHNINTGGGQPPGNSESQSQRVQSAQQQQQGSNLPPTTSATDLRVNSAAVNVALSSVAKYWVFTNLFPGPLPQVSVYNLPTNARIENGKPVQLLQDLGQTHGILNGDPNIILGHHAGQPQVTVSAAGQQIPVPQIIATQSGQTHEALVTHGQQQELTTQQSSSAAQVSVSGSQSSHQQVPNNRVEFVQHHNIDMGHHSQQQHLLQQQLLAAARPDHANQQIQLTVSEDGIVTVVEPGAGKLVDKEDLHETIKLPTDHTLTVHQLQQIVGHHQVIDSVVRIEQATGEPANILVTQNPDGTTSIETSAADPLAIVKDEKAVAKIEGAQFAIPAEIKEIKDLKSVGAMGMEVNVEDLSQLLAYHEVFGKLNTEGQQQQAKVITEVETEASTSAAMSEADSSPGHHACDICGKIFQFRYQLIVHRRYHGESKPYTCQVCGSAFANPVELSRHGKCHLAGDPAERQTKRLTQDKPYGCSTCHKTFSRKEHLDNHVRSHTGETPYRCQYCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHFMNHVMWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCNFCSKSFTRREHLVNHVRQHTGETPFQCGYCPKAFTRKDHLVNHVRQHTGESPHKCSFCTKSFTRKEHLTNHVRQHTGESPHRCTYCAKSFTRKEHLTNHIRQHTGETPHKCTLCPRAFTRKVHLNNHVRQHTGDTPHACTFCSKSFTRKEHLVNHVRQHTGETPFKCTFCTKSFSRKEHLTNHVHLHTGETPHKCPFCTKTFSRKEHLTNHVRIHTGESPHRCEFCHKTFTRKEHLTNHMKQHTGDTPHACKVCLKPFTRKEHLSTHMRRTHTEAADGSSAEPAADEDCADCNKCEKDTTERPERKHDVRAPSENRPTESSTAQTQQANTTVMQITSQQVRTAAASNATSVATATFTHTASPQHHAGAIAHHPVTVNY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00795879;
90% Identity: -
80% Identity: -