Basic Information

Insect: Lerema accius
Gene Symbol: -
Assembly: None
Location: scaffold558:26676-35139[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 34 4 2.5e+02 2.4 0.2 13 23 248 258 246 258 0.92

2 34 0.11 6.5 7.4 0.4 1 12 310 321 310 324 0.91

3 34 4e-05 0.0025 18.1 1.3 1 23 331 353 331 353 0.97

4 34 6.9e-06 0.00043 20.5 0.7 1 23 359 381 359 381 0.98

5 34 0.006 0.37 11.3 10.8 1 23 387 409 387 409 0.99

6 34 1.3e-06 8.4e-05 22.8 4.4 1 23 415 437 415 437 0.98

7 34 0.0084 0.52 10.8 0.4 1 16 443 458 443 460 0.92

8 34 6.9e-05 0.0043 17.4 4.1 1 23 463 485 463 485 0.98

9 34 3.3e-05 0.002 18.4 1.3 1 23 491 513 491 513 0.98

10 34 0.00015 0.0091 16.4 0.8 1 23 519 541 519 541 0.97

11 34 6.5e-07 4e-05 23.8 2.9 1 23 547 569 547 569 0.98

12 34 0.56 34 5.1 1.7 1 17 576 592 576 592 0.91

13 34 8.9e-05 0.0055 17.0 2.6 1 23 594 616 594 616 0.98

14 34 6e-07 3.7e-05 23.9 4.5 2 23 622 643 621 643 0.97

15 34 0.00038 0.023 15.1 1.6 1 23 649 671 649 671 0.98

16 34 3e-05 0.0018 18.5 2.5 1 23 677 699 677 699 0.95

17 34 2.6e-05 0.0016 18.7 1.6 2 23 706 727 705 727 0.97

18 34 0.00082 0.051 14.0 3.4 1 23 733 755 733 755 0.92

19 34 0.63 39 4.9 2.3 8 23 759 774 758 774 0.97

20 34 0.35 22 5.7 9.1 1 23 780 802 780 802 0.97

21 34 0.0031 0.19 12.2 1.8 1 23 808 831 808 831 0.97

22 34 7e-06 0.00043 20.5 0.8 1 23 837 859 837 859 0.98

23 34 0.00029 0.018 15.4 4.0 1 23 865 888 865 888 0.97

24 34 1.3e-05 0.00078 19.7 2.8 1 23 894 916 894 916 0.97

25 34 0.00026 0.016 15.6 3.4 1 23 922 944 922 944 0.98

26 34 0.0006 0.037 14.4 2.7 1 20 950 969 950 969 0.96

27 34 0.28 17 6.0 2.1 1 23 971 993 971 993 0.96

28 34 5.9e-07 3.6e-05 23.9 1.5 2 23 1169 1190 1168 1190 0.97

29 34 8.2e-07 5.1e-05 23.4 1.6 1 23 1196 1218 1196 1218 0.98

30 34 9e-05 0.0055 17.0 3.0 1 23 1224 1246 1224 1246 0.98

31 34 8.1e-05 0.005 17.2 0.4 1 23 1252 1274 1252 1274 0.97

32 34 1.2e-05 0.00073 19.8 4.3 1 23 1280 1302 1280 1302 0.98

33 34 4.1e-05 0.0026 18.1 0.8 1 23 1308 1330 1308 1330 0.92

34 34 2.7e-05 0.0017 18.7 3.0 1 23 1336 1358 1336 1358 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	34	4	2.5e+02	2.4	0.2	13	23	248	258	246	258	0.92
2	34	0.11	6.5	7.4	0.4	1	12	310	321	310	324	0.91
3	34	4e-05	0.0025	18.1	1.3	1	23	331	353	331	353	0.97
4	34	6.9e-06	0.00043	20.5	0.7	1	23	359	381	359	381	0.98
5	34	0.006	0.37	11.3	10.8	1	23	387	409	387	409	0.99
6	34	1.3e-06	8.4e-05	22.8	4.4	1	23	415	437	415	437	0.98
7	34	0.0084	0.52	10.8	0.4	1	16	443	458	443	460	0.92
8	34	6.9e-05	0.0043	17.4	4.1	1	23	463	485	463	485	0.98
9	34	3.3e-05	0.002	18.4	1.3	1	23	491	513	491	513	0.98
10	34	0.00015	0.0091	16.4	0.8	1	23	519	541	519	541	0.97
11	34	6.5e-07	4e-05	23.8	2.9	1	23	547	569	547	569	0.98
12	34	0.56	34	5.1	1.7	1	17	576	592	576	592	0.91
13	34	8.9e-05	0.0055	17.0	2.6	1	23	594	616	594	616	0.98
14	34	6e-07	3.7e-05	23.9	4.5	2	23	622	643	621	643	0.97
15	34	0.00038	0.023	15.1	1.6	1	23	649	671	649	671	0.98
16	34	3e-05	0.0018	18.5	2.5	1	23	677	699	677	699	0.95
17	34	2.6e-05	0.0016	18.7	1.6	2	23	706	727	705	727	0.97
18	34	0.00082	0.051	14.0	3.4	1	23	733	755	733	755	0.92
19	34	0.63	39	4.9	2.3	8	23	759	774	758	774	0.97
20	34	0.35	22	5.7	9.1	1	23	780	802	780	802	0.97
21	34	0.0031	0.19	12.2	1.8	1	23	808	831	808	831	0.97
22	34	7e-06	0.00043	20.5	0.8	1	23	837	859	837	859	0.98
23	34	0.00029	0.018	15.4	4.0	1	23	865	888	865	888	0.97
24	34	1.3e-05	0.00078	19.7	2.8	1	23	894	916	894	916	0.97
25	34	0.00026	0.016	15.6	3.4	1	23	922	944	922	944	0.98
26	34	0.0006	0.037	14.4	2.7	1	20	950	969	950	969	0.96
27	34	0.28	17	6.0	2.1	1	23	971	993	971	993	0.96
28	34	5.9e-07	3.6e-05	23.9	1.5	2	23	1169	1190	1168	1190	0.97
29	34	8.2e-07	5.1e-05	23.4	1.6	1	23	1196	1218	1196	1218	0.98
30	34	9e-05	0.0055	17.0	3.0	1	23	1224	1246	1224	1246	0.98
31	34	8.1e-05	0.005	17.2	0.4	1	23	1252	1274	1252	1274	0.97
32	34	1.2e-05	0.00073	19.8	4.3	1	23	1280	1302	1280	1302	0.98
33	34	4.1e-05	0.0026	18.1	0.8	1	23	1308	1330	1308	1330	0.92
34	34	2.7e-05	0.0017	18.7	3.0	1	23	1336	1358	1336	1358	0.98

Sequence Information

Coding Sequence: ATGAATCTTGATACAAAGGAAATGCTACAAAACTTACATGTACTTACTGACCACAATATTATATGTGCTGTTGATGATAAAATTATTAAAACTGCAGATTTGATACATGATAACATGGTGAATAGACAGATATTGTCACAGAGAATTTTAGTTAATGAAATTATAATGAAACATAACGATGTAATTCATAAAGAAGACACTAGTGGTGACCATATAAACAGCAGTGACCCGGTGTGTGGATCACCCGCAGCTGAAGATACTGTCATTGATGACATTAAAACTGAACAAGATGATGTAGTGGACCAGGACCTGACTGATACTGAACACACTACTGATTGTGATGCGGAGTGTCCATCAAACACTAACAATGATCTATTCACTGATGATGTGAAAGTAAACATTGTCCAAGAAATGATTGCCCCTGAAGAGTGCACCAACATAGAGATGCTGTGTAGATCAGCGGCCACAGATGTAGCTGTCAGTAGAGTGAAGGTTGAACACTGTGGAGTGATGAATGAGGACAGAGCCGGAGACAGTACAGTGGAGTGCAAAGATATTCATTTGACAGGCGACAGGGACTGTGCAGAACACGTTCTTCCGCCACCAGAGGGCGCCAACGAGCCCACAGACCAACATCTACCGGGGCAGCGACCAGACAAACTGAGTGATAAGACACTCCACACAGACAGACAGTATAACACCGCACATATTATTACATATTCACCATTGATACATTCATTAAAAAGTGACCTAGCTACCCACATGAAAGTACATTCTACACAACACTCGAGTGAGGTGAACATAGCAACGGTTAAAACTAAATCTAGTGCTAACAAAAAGCCAGGGATACAATCTAGTGAGAAACCATATTCGGGTCGTGTTACTGGTTTTACTAAACAGACAGACAGCCGCGCTGCAGTCAAACCATACTCCTGTGATATTTGTAAGAAAACATTCCCACATTTAATAACACATTCGGGTGTGAAACCATATTCGTGTGAAATATGTCAGAAAGCATTTCATTCAAAAAGTGGTCTCACGGCTCACAATAAGATACATTCGAGTGAAAAACCATTTTCATGTGACATTTGTGATAAAACATTCTCCCGTAAACAAGAGGTTGAAATACATTTATACACACATTCGCATATGAAACCATATTCTTGTGAAATCTGCCATAAAACTTTTAAATCCAAAATGCATTGTCGGAAGCACCTTAAGACACATTCAGATGAAAAACCATTTACCTGTGAAATCTGTCATAAAGTATTTAAAACAAATACTTATCTTAAAAAGCATGTTAACACTCATTTGAGCGATAAAGTGTTCTCGTGTGAAATCTGTCAGAAAAAATTTAAAACAAAGCCGAGCCTTGCTGAAAAACCATTTTCTTGTGACATTTGTAAGAAAGAATTCTCTCGTAAAAATTGTGTAAAGTTACATATAAGGACACATTCAGCTGAGAGACCATTTTCGTGTGAAATATGTCACAAAAAAATTGTGTCGAAAAGAAATCTTGCAATTCATATGATGACACATTCTGATGAAAAACCATTTCCTTGTCATATTTGTAATAAAGCATTCTTAACTAACAGTAAACTAACAGATCATTTGATAATACATTCTGGTGAGAGACCGTTTTCGTGTGAAGTTTGCCACAAATCGTTTAACTATAAAGGTAACTTTACAGCACATATGAGGATTCATACAAGAGTCAAAAAGGAGTTTTTTTGTGAAATTTGCTACAAAACATTTTATGGAAAAAAAGATCTTAAGCCCTTTTCATGTGATATTTGTGATAAATCCTTCCATCTTAAATATAAACTAACAATACATTTAGAAACTCACGCCGATGAGAAGCTTTCCTGTAAACTCTGCTCGAAGACATTTGTCCATAAATCGAATCTTACGACCCACATGCGGACACATCGAGGAGAGAAACCATATTCCTGTGAAGTCTGCCAAAAACAATTTTACTTCGCCAGTACTTTCGCGGCTCATAAAAAGACACACGTTGACGTGAAGCCGTTTTTGTGTTATATTTGTCAGAAAGCATTTGCTAGTAAAAGTTATCTCGAGCGCCATCTGTGCTCTCACTCCGGCGCGCGGCCGGTCTCGTGTGAACTCTGCTCCAAGACATTCACTCACGTCAGCGGGCTCAAGAGCCACATGAAGATACATTCCGGTGAGAAACCACATGCATGTACTATTTGCGATAAATCATTCGTTCGTAAAGAACACTTGAAGTTTCATGTACTCAACCATTTAGACTTGAAGTCGTATAATAATAACCATAGTTTTAAAGCTCATCTCAAAACACATTTCGGTGTAAAAGACTTTTCGTGTTCTATCTGTCACAAAGCTTTCTTGCATCGATGTACTCTCAGAAAACATTTCATGTCACATTCTGGTGAGAAGCCATATTCCTGTGATATCTGTCACAATAAATTCGCTTCAAAAAACAGCATTTACACTCATATGAAAATAGTACATTTGGGTGAAAAACCATTTTCGTGTGAAGTGTGTAATAAATCGTTTGGTCGCAAACAAGATATGACGGCGCATTTAAACACACATTCAAATGAAAAATCGTTTGCGTGTAAACTCTGCCCCAAGAAATATAATCATAAATCGAATCTAAGATTCCACATGAAGACGATTCATGTTGTTAAAAAACCACACATTTGCAACATTTGTAACAAAGGATTCGATCGTAGAAAGTACTTAGCAAAACATTTAAAGACACATTCTGTCGAGAAACCGTTTTCGTGCAAAATCTGTCAACAAAAATTTACGAAGAAACGTTATCTTGTTACGCACGCGAGGAGACATTCCGGTGAAAAACCATTTTCATGCGAAATCTGTCAAAAAATATTTTACCAAAAAAGTCATTACACAAACCATAGACCATACTCGTGCGATATTTGTGCCAAATCATTTATTTGTAAATTTAAACTAATACCACATTTACGGAGACATGTTGACAATCCCAGTTTCGTAGCAATGGAATTAAACACTGACTATAATGAAAGACTCAACAATGATAAACACATTAATAACTTAACACCAATCATGTCTGGGGACATTGCTGTCTGTAATATTGCTGTTAAGATTGAAAGTATTGATTCTCTTGACAATACAATGGTTAAAACTGAAAATAAACCAGATTTAGACATTGTAAATACAAAAATGTTGCCTCAACATGCTATTGATGTGATTAAAATAGAATATAATGATGTAGTTAAACATGACAGAGTTGATGATAAAGACACAATTGATTGTAACTTGAAGAGTCAATCAACAAACAAAGACTTATTTGCTGATGGTGTGACAGTAAAAATTGTAGAGGAAATGATTGCTCCTGAAGATTGCACCAACATAGAGATGCTGTCTGTCAGTAGTGTTAGGAGTACAGTAGATATCTCCCCTGTAGCAGAGACACCAGTCGCCGGCGTGCAGCAAGTGAGGGCGGAGCGCCGCCTGCGAGCTGACAACGGAGGACTGCCGTGTGAAGTCTGCCACAAGACTTTCAGACAAAACTATGAACTTGTCAACCATATGAGGTCACATACAGGAGAAAAACCATTTACATGTAAAGTTTGTGACAAAACATTTGCGTATAAACGGAATCTTACCGATCATTTGAAGATACATTCAGGGGAGAAATTGTTCTCGTGTGAAGTATGTCAAAAGAAATTTAGGAAACAGAATATACTTACTAGACATATGAAAACACATTCAGGGGAGAAACCATTTGCGTGTGAAGTTTGCAACAAAACATTTGCAGACAAAAGGAGTCTTTCGCCACATATGAAATCACATACACGAGAGAAACCATTTTCGTGTGAAATTTGCCATAAATCATTTTCGTATAAACGTACGATTACCGATCACATGAGGACACATTCAGGGGAAAAACCATTTTCATGCGAAGTTTGCGACGAATCATTTTCATATAAAAAGAGTCTCACTGATCATATGTGGACACATTCTGCGAAAAAACCATATTCATGTGAAGTCTGTCATAAGAGATTTGCGTATAAACGTAGCCTCACTGACCATATAACAACACATTCCGAGGACGACAGACAAACGTTTGATTCAGAGAACACATAG
Protein Sequence: MNLDTKEMLQNLHVLTDHNIICAVDDKIIKTADLIHDNMVNRQILSQRILVNEIIMKHNDVIHKEDTSGDHINSSDPVCGSPAAEDTVIDDIKTEQDDVVDQDLTDTEHTTDCDAECPSNTNNDLFTDDVKVNIVQEMIAPEECTNIEMLCRSAATDVAVSRVKVEHCGVMNEDRAGDSTVECKDIHLTGDRDCAEHVLPPPEGANEPTDQHLPGQRPDKLSDKTLHTDRQYNTAHIITYSPLIHSLKSDLATHMKVHSTQHSSEVNIATVKTKSSANKKPGIQSSEKPYSGRVTGFTKQTDSRAAVKPYSCDICKKTFPHLITHSGVKPYSCEICQKAFHSKSGLTAHNKIHSSEKPFSCDICDKTFSRKQEVEIHLYTHSHMKPYSCEICHKTFKSKMHCRKHLKTHSDEKPFTCEICHKVFKTNTYLKKHVNTHLSDKVFSCEICQKKFKTKPSLAEKPFSCDICKKEFSRKNCVKLHIRTHSAERPFSCEICHKKIVSKRNLAIHMMTHSDEKPFPCHICNKAFLTNSKLTDHLIIHSGERPFSCEVCHKSFNYKGNFTAHMRIHTRVKKEFFCEICYKTFYGKKDLKPFSCDICDKSFHLKYKLTIHLETHADEKLSCKLCSKTFVHKSNLTTHMRTHRGEKPYSCEVCQKQFYFASTFAAHKKTHVDVKPFLCYICQKAFASKSYLERHLCSHSGARPVSCELCSKTFTHVSGLKSHMKIHSGEKPHACTICDKSFVRKEHLKFHVLNHLDLKSYNNNHSFKAHLKTHFGVKDFSCSICHKAFLHRCTLRKHFMSHSGEKPYSCDICHNKFASKNSIYTHMKIVHLGEKPFSCEVCNKSFGRKQDMTAHLNTHSNEKSFACKLCPKKYNHKSNLRFHMKTIHVVKKPHICNICNKGFDRRKYLAKHLKTHSVEKPFSCKICQQKFTKKRYLVTHARRHSGEKPFSCEICQKIFYQKSHYTNHRPYSCDICAKSFICKFKLIPHLRRHVDNPSFVAMELNTDYNERLNNDKHINNLTPIMSGDIAVCNIAVKIESIDSLDNTMVKTENKPDLDIVNTKMLPQHAIDVIKIEYNDVVKHDRVDDKDTIDCNLKSQSTNKDLFADGVTVKIVEEMIAPEDCTNIEMLSVSSVRSTVDISPVAETPVAGVQQVRAERRLRADNGGLPCEVCHKTFRQNYELVNHMRSHTGEKPFTCKVCDKTFAYKRNLTDHLKIHSGEKLFSCEVCQKKFRKQNILTRHMKTHSGEKPFACEVCNKTFADKRSLSPHMKSHTREKPFSCEICHKSFSYKRTITDHMRTHSGEKPFSCEVCDESFSYKKSLTDHMWTHSAKKPYSCEVCHKRFAYKRSLTDHITTHSEDDRQTFDSENT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -