Basic Information

Insect: Lerema accius
Gene Symbol: -
Assembly: None
Location: scaffold511:500624-507754[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 1.5e-08 1.5e-05 24.5 0.0 1 45 341 385 341 385 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	1.5e-08	1.5e-05	24.5	0.0	1	45	341	385	341	385	0.94

Sequence Information

Coding Sequence: ATGTTTTATATTAAACAATGTTCGGCCTCAGATAATTACGAAGTATCAGATCATAAATATGAAAACTTACCAAAAAATCCGGGATTTGACATTAAAAATACTATTGTTCCAACTGCAAACTTAAAATTAAACGTATTTGATAAAATGCTATCTGAAGAAATGCTTTCTATAAAACAGCATTTTCATGAGAGAGATTCAAGTCATACTCCTTCTGTACGAATTTCAGTACAAGGGGCTGGCGCTACACCCACATTAGAAGTAAAACAGAAATGGCCTATCGAAAACTTGTTTCTGAAATCCTGGAATGTTAATAATAGAAGTAAATTGCTGATTAATGATGAAATACATCAACAATCACAAAATTTTACAACAAATGTAACTTCGAATGTCACTTATGATAATTGTAGTAAAAATGAATGCAATGGAAAGATAAAAGATAAAGTGCTGGAACTTAGGAGTTTGCCTGAAACTAGACAGATGAGAATTTGTGAATGCATGAAAACTAATTCCGACTCTACATGTAGTCATCTTTGTACGGGTTTAGGTGCCGAAAAGGATACTGATGTCTGTAAACACACAAATACAGAGCTAACGCATGAATGTACACGAACATCAGCAACAGATTTATCATTTCTAACTTATTCCATTTATCCTATTTATGTGACGCACCCACCATATTTTTGGGGAATATCTACATATACCAAAAATCCATATTATCATCCAAATCCAGTCAATGAAATTAAAATATCGAAAACTAAAAAAAGACGTAAACACAAGAAGCCTCGCCCACATCTTGAAGATAGTTATCAAGGAATAATTTTGGGTGGTAATGACAAATATGACAATGGTATGGAAAATTACATTAACTCAATCGAAATTTATGATGAAGACATACATAAAGAGTCTAAACATAAATCGTCAACTCTAGCCGCAAAAGAATATGAAGATGATGAATTCAAAGAAGGATTATCTAACAAGTTGGATATGGACAACATGTCAAAAAGAAAATATAATACCTGGAGCAATGATACGATGGAAGCAGCTATTAAAAAATATAAAGATGGTGACTTAAAATTTAATGAAGTTTGTCGAGTATATAATATACCTAAACCAACATTTAGACGACATTTAAAAGGACTGAATAAATACCAAAGAATAGGTCGTCCAAAAGATTTGACTGTTGAAATGGAAGCAGAACTTGTCAGACATGTTTTATTGTTGGAATCTAGATTTTTTGGTCTTACTATAACAGACTTGAGACGCTTAGCTTACCAGTTAGCAGAAAAATACGGACTGAAACATAGATTTAATAATGAATCACAATTAGCCGGATGGAAATGGTATTATACATTTATGAAGAATCACCCAGAAATATCCTTGCGAACTCCAGAAGCAACATCTATGGCTCGCTTCAAAGGATTCAATAAAGAAACGGTTATGGCATTCTTTGACAAATATGAATCACTGTTGGACATGTGTCAATTAACTGCTGACAAAATTTATAACATGGATGAGACAGGTTTAAGTACCGTGCATAGGCCATCTAAAGTATTGGCTCAAAAAGGGAAACACCAGGTAGGAGCTGTTACAAGTGGTGAACGCGGTGTTAACACCACATGTATTTGTTGTATGAACGCTGCTGGTGAATTTGTGCCACCCATGCTCATATATAAACGGAAAAGAATGACTGATGATTTAAAGCGAGGAGGGCCACCAAACACTTTATATGATTGTTCAGAAAGCGGATGGATTGTTAGTGCATTATTTATCAAATGGCTTGAACATTTTATAAAATCTCTGAGACTAGAAAAGTCAAAAGAGAATCAAGTTCTCCTCATCTTAGACGGACATTCGACGCATACAAAAAACATTGATGCCATTAATCTTGCTAGAGAGTATGGAATAATTATGTTATCTCTGCCAGCGCATACCACACATAAACTACAACCACTTGATAGGTCATTTTTCAAGTCATTAAAACAAAATTTTAGTTCGGCTTGCTCTTCGTGGATGCGAAACCATCCTGGTTCCGTAATAAAGCAATCAAACATCGCAGAAATTTTGGGAGAGGCATATCCTCGATCCGTTTGCATGGACAAAGGCATCCATGGCTTTGAATCCTGCGGGCTATGGCCGTGCAATCGATTTAAAATCAGAGACGAGGAATATGTTATTGTTGAAGAAAATGTTACTATAAGTGAATCATCAGAAATCCCTCAGAATCTGATAGCTAAAGGACAGCAAGCACATACAGATTCTGTTACATCCGTTACACAAACCAGCATGACTGACAAACAAGAAAACACTAATAGGGAAGGATATTCTATAGCGACTGAAGCAAGTACATCTAAAACCGAGTCAGTTCGAGAGACACTGGGCATTTTATCTCCATTGAGTACTATACCTTCTAATTCAGAACAATCAAAAAGAACCACTACAGGCGCTCTTGTTATTACAGGAACTCCTTATAAACAAGAACTTGAAAATAAAATAGACGAATCCAAGAAGAAAACTGTATCAAGGAAAATTTCTTTACACTTAGTAAAGAAATGTAATTCTATAAAAGCATCTGAAAAGGAAAATAAGAAAAAGAAACAAACACAAGATAAAAACGATAGTTGGTACTGTAAACTATGTCAAGAAGATATTCAAGAAAATATGATCAAATGTAGTGAATGTGAAGTATGGGTACATGAATTATGTGCAGGAACCAATAAAAAAACACATTGTTACTACTGCGATGACTGCCAAGACTTAGCGAAGACCATCCGCCAAATTGTTGACTCTTAA
Protein Sequence: MFYIKQCSASDNYEVSDHKYENLPKNPGFDIKNTIVPTANLKLNVFDKMLSEEMLSIKQHFHERDSSHTPSVRISVQGAGATPTLEVKQKWPIENLFLKSWNVNNRSKLLINDEIHQQSQNFTTNVTSNVTYDNCSKNECNGKIKDKVLELRSLPETRQMRICECMKTNSDSTCSHLCTGLGAEKDTDVCKHTNTELTHECTRTSATDLSFLTYSIYPIYVTHPPYFWGISTYTKNPYYHPNPVNEIKISKTKKRRKHKKPRPHLEDSYQGIILGGNDKYDNGMENYINSIEIYDEDIHKESKHKSSTLAAKEYEDDEFKEGLSNKLDMDNMSKRKYNTWSNDTMEAAIKKYKDGDLKFNEVCRVYNIPKPTFRRHLKGLNKYQRIGRPKDLTVEMEAELVRHVLLLESRFFGLTITDLRRLAYQLAEKYGLKHRFNNESQLAGWKWYYTFMKNHPEISLRTPEATSMARFKGFNKETVMAFFDKYESLLDMCQLTADKIYNMDETGLSTVHRPSKVLAQKGKHQVGAVTSGERGVNTTCICCMNAAGEFVPPMLIYKRKRMTDDLKRGGPPNTLYDCSESGWIVSALFIKWLEHFIKSLRLEKSKENQVLLILDGHSTHTKNIDAINLAREYGIIMLSLPAHTTHKLQPLDRSFFKSLKQNFSSACSSWMRNHPGSVIKQSNIAEILGEAYPRSVCMDKGIHGFESCGLWPCNRFKIRDEEYVIVEENVTISESSEIPQNLIAKGQQAHTDSVTSVTQTSMTDKQENTNREGYSIATEASTSKTESVRETLGILSPLSTIPSNSEQSKRTTTGALVITGTPYKQELENKIDESKKKTVSRKISLHLVKKCNSIKASEKENKKKKQTQDKNDSWYCKLCQEDIQENMIKCSECEVWVHELCAGTNKKTHCYYCDDCQDLAKTIRQIVDS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -