Lacc014965.1
Basic Information
- Insect
- Lerema accius
- Gene Symbol
- -
- Assembly
- None
- Location
- scaffold549:318121-322140[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.3e-07 0.00024 20.7 0.1 3 38 219 254 217 260 0.88 2 2 8.2e-08 8.3e-05 22.2 0.0 4 34 296 326 294 334 0.88
Sequence Information
- Coding Sequence
- ATGCACAGTGGAAATAACATTGTTGATACCGTCGATGACTGTCTACACAGCAACTATTTTAATGTCCAAAATACAAAGGGCCAGAGCAAAAAGAATAAAACAGCTGATCCAGGCAGCCTTAGATGCTCATGTTGCTTGCATACAGATAAGCTAAGAAGCTTATGGCGGGAATTCTGTAGTGATGGTGTGACTGAGATATATGGATCCATGCTGATTGAATGCTTTGCATTATCTTTGAACAGACCAATAGACCCTGATGAAAGTGTGGAACAGATCTGTGAACATTGTATAACGAAACTAAAAGATGCAGTTAGATTTAAAGAGGAAGTACTGGCATCTACAAGGGTTTTAAATGAACGAAATGAGCTTGCAAACAAGATAAAACAAGAAATATTAGATGTGGATATTGAAATAGAGTTAAAACCAGAATACCTCAATATGGAGAATGATCACCTTGGTGATGATGTTGATCACCCGACCACTGGAGTTAATGAGTTTGATGATGTAGATGTGAAACCTGATGATCCTATAAAAGTGATAAAGCTGGAACCATTGCCAACAACCTGTTGCGAAGAGAGTGAACTCACACAGACCTCTAGTCGACGGACTAGGCCTAGCGAGGCTATACCTAAGAAGTATAAGAAGTATACAGCTGACGACGTCCAGAGAGCCGTGGAGGCTGTCGCTGGAAGGACCATGTCACAGAATAAAGCGTCTAAGACCTTCAAGGTGCCTGTTAGAGTACTAGCCAGTGCTTTGAAAAGTTATGTGAACATCAAACAGGAGAATCAAGGCAATAAAGAAATGGAGTCCAAAATGGCGTCTACTCGCAAACGGTCTGGTAAAGCTCCTAAACAGAAGAAGAAACAGCAGTATCCAGAACAGAACCTGCTGCAGGCCTTCGAGGAGGTCTGGAATAAACGGATGACTCAGACTGAGGCTGCCAAGGCCTACAAAGTACCAAGATCCACCATCTTTGATATGATCAATAAAAACCTCGGCAAGCCACGACGCATGAAGAAGACAGGTGAAGAAGGGCCACAGGAAATGGTGAAGCATACGACAAACATCCTCACTATCATGGAGAACTCCAACGCAACGCCAATCCGTAGCCATGGCGACGGAGGATACATGTGCTGCTTCTGCAACCATCAGTACCAGAAACCAAACGACTTAAAGAACCATACGTTATTCTGCCATGACTTTAAAACCAAACGGATGCTTACTAAAGGCAAAAGACCATCTTCTTACTTCATCAAACTGGATATTTCCTACTTAAAATGCACCATATGTGATACCAATATGGTCACTTTAGAGAAGTTAATTGATCATCTTATCAACGATCATCAGAAACTGATGTATACAGACATTAAAAATCAAATCTTACCATTCAGATTTGAAAGCGAAGACCTGAGGTGTACAGTGTGTTTCAATGTGTATAACAAATTCAAGTTATTGCAAGAACATTTGAACGTACATTACCAGAACTATGTATGTGAAGTGTGCAATGCTGGATTTGTATCGAGAACGATTCTTCACAACCACTCAAGAGGGCACAAGACCGGTGTATTCACTTGTGAAGTGTGTCTAAAAGTGTATTCAACTCTCCGTAAACTGACTTATCACAAAAACTTGGTGCATAGACATTCTTACCTAGTAAGCAAGTGTGGTTATTGCCATCAAAAGTTCAAGTCGTATCATCGAAAGCTAGAACATTTGACTGAAGTACATAATGTGAAACCAATTACTTATCCTTGTAAGGCTTGTAATAGGAACTTTAATAGTCAGGCAGCATTACGTGTGCATAGGAATCGGGACCATTTAATGGAGAGGAAATATAAGTGTACAGAATGTGATATGGAATTTTTTACTCAAGCATTGCTTACTGCTCACATGTTGAAGCATACTGGGTTGAGAGAATTTCAGTGTGATGTGTGTCAAAAGTTTTTTAAACGGAAGTTTACATTGACGGAGCATATGCGGATACATGAGAATAATTGTAGGTTTAAGTGTGAACAGTGCGGGGCAGCGTTTGTGCAGAAATGCAGTTGGAGGGGACATATGAGGAACAAACATGGAATCATTAGCTGA
- Protein Sequence
- MHSGNNIVDTVDDCLHSNYFNVQNTKGQSKKNKTADPGSLRCSCCLHTDKLRSLWREFCSDGVTEIYGSMLIECFALSLNRPIDPDESVEQICEHCITKLKDAVRFKEEVLASTRVLNERNELANKIKQEILDVDIEIELKPEYLNMENDHLGDDVDHPTTGVNEFDDVDVKPDDPIKVIKLEPLPTTCCEESELTQTSSRRTRPSEAIPKKYKKYTADDVQRAVEAVAGRTMSQNKASKTFKVPVRVLASALKSYVNIKQENQGNKEMESKMASTRKRSGKAPKQKKKQQYPEQNLLQAFEEVWNKRMTQTEAAKAYKVPRSTIFDMINKNLGKPRRMKKTGEEGPQEMVKHTTNILTIMENSNATPIRSHGDGGYMCCFCNHQYQKPNDLKNHTLFCHDFKTKRMLTKGKRPSSYFIKLDISYLKCTICDTNMVTLEKLIDHLINDHQKLMYTDIKNQILPFRFESEDLRCTVCFNVYNKFKLLQEHLNVHYQNYVCEVCNAGFVSRTILHNHSRGHKTGVFTCEVCLKVYSTLRKLTYHKNLVHRHSYLVSKCGYCHQKFKSYHRKLEHLTEVHNVKPITYPCKACNRNFNSQAALRVHRNRDHLMERKYKCTECDMEFFTQALLTAHMLKHTGLREFQCDVCQKFFKRKFTLTEHMRIHENNCRFKCEQCGAAFVQKCSWRGHMRNKHGIIS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00887709;
- 90% Identity
- iTF_00887709;
- 80% Identity
- iTF_00887709;