Lacc001836.1
Basic Information
- Insect
- Lerema accius
- Gene Symbol
- retn
- Assembly
- None
- Location
- scaffold358:105914-184545[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 5.1e-27 9.8e-24 83.5 0.0 1 89 106 192 106 192 0.96
Sequence Information
- Coding Sequence
- ATGGAATCTTCATCACAGGTGCGAGATGACTTCGAATCCCTCAAAACTTCACTCCATCCTCACTTGTCGTCTCTGGCGTCGCTGGCGCAGGGGGCGCCACTGTCGACACCTAGTAGCGTCTTCGCGCTAGCCGGCGGGGGAGCGACCGGGGGGTTCCCGTACGCCCCTCCGGCGTTCCTAGCCCCCGCGCCGCCTCCCCCCGCACAACCTGCTGGCTCTGCCTCGTCATCCTCTTCCGAAGGCAGTGCAGCCGGCTGGAGCTTCGAAGAACAGTACAAACAAGTTCGTCAGTTATACGAGATCAGCGACGATCCGCAGAGGAAGGAGTTTCTCGATGATCTGTTCTCTTTCATGCAAAAGCGAGGCACACCAATCAACAGGCTGCCGATCATGGCCAAGTCAGTGCTGGACCTGTACGAGCTGTACAACCTGGTGATAGCCCGCGGAGGCCTGGTAGAGGTCATCAACAAGAAGCTGTGGCAGGAGATCATCAAAGGTCTTCGGCTTCCGTCTTCCATCACCTCAGCAGCCTTCACTCTGCGTACTCAATACATGAAATACTTGTATGACTACGAGTGTGAGAAGAAAAATCTGTCTACCCGCAGCGAATTGGATGCGGCTATTGAAGGGAACAAACGGGAGGGTCGCCGCGCGTCCGGACAGTATGACGCGCAAGCTGCTTTGGCTATGGTGAATACTTATTACTTTATTGTAGATAGGACCTTTTGGAGCTAG
- Protein Sequence
- MESSSQVRDDFESLKTSLHPHLSSLASLAQGAPLSTPSSVFALAGGGATGGFPYAPPAFLAPAPPPPAQPAGSASSSSSEGSAAGWSFEEQYKQVRQLYEISDDPQRKEFLDDLFSFMQKRGTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALAMVNTYYFIVDRTFWS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -