Basic Information

Insect: Leptura quadrifasciata
Gene Symbol: -
Assembly: GCA_963675555.1
Location: OY776680.1:80009476-80039559[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 26 0.017 3.1 10.5 0.8 1 23 235 257 235 257 0.99

2 26 0.0046 0.85 12.3 5.4 1 23 292 314 292 314 0.98

3 26 0.045 8.4 9.2 1.8 1 23 323 345 323 345 0.97

4 26 0.0002 0.037 16.6 2.5 1 23 354 376 354 376 0.99

5 26 0.17 31 7.4 0.5 1 23 385 407 385 407 0.98

6 26 0.46 86 6.0 4.8 1 23 418 440 418 440 0.97

7 26 0.00016 0.03 16.9 1.9 1 23 449 471 449 471 0.99

8 26 0.00093 0.17 14.5 1.6 1 23 480 502 480 502 0.99

9 26 2 3.7e+02 4.0 5.0 1 23 804 826 804 826 0.98

10 26 0.0012 0.22 14.2 1.4 1 23 834 856 834 856 0.98

11 26 0.41 76 6.2 5.6 1 23 865 887 865 887 0.98

12 26 0.018 3.3 10.4 0.3 1 23 896 918 896 918 0.98

13 26 0.0018 0.34 13.6 4.7 1 23 927 949 927 949 0.99

14 26 0.00043 0.08 15.5 3.6 1 23 958 980 958 980 0.97

15 26 0.0029 0.54 12.9 1.9 1 23 989 1011 989 1011 0.98

16 26 0.053 9.9 9.0 1.6 1 23 1020 1042 1020 1042 0.98

17 26 0.0056 1 12.0 1.8 1 23 1051 1073 1051 1073 0.98

18 26 0.0038 0.7 12.6 1.0 1 23 1082 1104 1082 1104 0.98

19 26 0.01 1.9 11.2 1.9 1 23 1113 1135 1113 1135 0.99

20 26 0.042 7.8 9.3 0.9 1 23 1144 1167 1144 1167 0.97

21 26 0.003 0.55 12.9 5.1 1 23 1207 1229 1207 1229 0.98

22 26 0.61 1.1e+02 5.6 0.5 1 23 1238 1261 1238 1261 0.92

23 26 0.0041 0.76 12.5 2.3 1 23 1270 1292 1270 1292 0.98

24 26 0.0017 0.31 13.7 1.7 1 23 1301 1324 1301 1324 0.93

25 26 0.11 20 8.0 5.8 1 23 1333 1355 1333 1355 0.98

26 26 0.096 18 8.2 1.3 1 23 1372 1394 1372 1394 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	26	0.017	3.1	10.5	0.8	1	23	235	257	235	257	0.99
2	26	0.0046	0.85	12.3	5.4	1	23	292	314	292	314	0.98
3	26	0.045	8.4	9.2	1.8	1	23	323	345	323	345	0.97
4	26	0.0002	0.037	16.6	2.5	1	23	354	376	354	376	0.99
5	26	0.17	31	7.4	0.5	1	23	385	407	385	407	0.98
6	26	0.46	86	6.0	4.8	1	23	418	440	418	440	0.97
7	26	0.00016	0.03	16.9	1.9	1	23	449	471	449	471	0.99
8	26	0.00093	0.17	14.5	1.6	1	23	480	502	480	502	0.99
9	26	2	3.7e+02	4.0	5.0	1	23	804	826	804	826	0.98
10	26	0.0012	0.22	14.2	1.4	1	23	834	856	834	856	0.98
11	26	0.41	76	6.2	5.6	1	23	865	887	865	887	0.98
12	26	0.018	3.3	10.4	0.3	1	23	896	918	896	918	0.98
13	26	0.0018	0.34	13.6	4.7	1	23	927	949	927	949	0.99
14	26	0.00043	0.08	15.5	3.6	1	23	958	980	958	980	0.97
15	26	0.0029	0.54	12.9	1.9	1	23	989	1011	989	1011	0.98
16	26	0.053	9.9	9.0	1.6	1	23	1020	1042	1020	1042	0.98
17	26	0.0056	1	12.0	1.8	1	23	1051	1073	1051	1073	0.98
18	26	0.0038	0.7	12.6	1.0	1	23	1082	1104	1082	1104	0.98
19	26	0.01	1.9	11.2	1.9	1	23	1113	1135	1113	1135	0.99
20	26	0.042	7.8	9.3	0.9	1	23	1144	1167	1144	1167	0.97
21	26	0.003	0.55	12.9	5.1	1	23	1207	1229	1207	1229	0.98
22	26	0.61	1.1e+02	5.6	0.5	1	23	1238	1261	1238	1261	0.92
23	26	0.0041	0.76	12.5	2.3	1	23	1270	1292	1270	1292	0.98
24	26	0.0017	0.31	13.7	1.7	1	23	1301	1324	1301	1324	0.93
25	26	0.11	20	8.0	5.8	1	23	1333	1355	1333	1355	0.98
26	26	0.096	18	8.2	1.3	1	23	1372	1394	1372	1394	0.99

Sequence Information

Coding Sequence: ATGAATAATCTTCAAGTATTCCTTACTCTGAAATCTGCCTGTGTTGATATAAGGGAGAAGTCCTTAAATTTCACCGAGTTACAAAACAATGTCAGTGTGAATCCAGTAGATACTGAAAAAAATACAGATAACCTGAAGTCGGTTGGTGAACCCAGGGATGAAATAAGATGTAGTTTTTGTACGTCAACTGGGCAACAAAGACTTATATCATTATATGAATCAAAAGAAAATATGTTCATGGTGGATATGTTGGAGAAACATATCCCAGAACtgAATATGTGCAATACCGAAGAACTTTTAACTTGCGAAACTTGTCTTAATAAAATGCAAACGGTTTCAAACTTTCTAACCAATCTTCTCTATGTGgaagaaaaaataagtaaatacatGGAAATAGAACAAGTGGATTTTAAAGGGCAGATAGAATTACAGGATGTACAACAGTTTAAAATCGAACCAACATTAAAATGCGAAGGTGATTCGTGCCAAATAAATGAGTTAGAACAGACATATGAGCAGATTCAAGAAAACTATCCCATGAAAGTTGAAACTGAAGTAGGATATAAAATAGAAGTGGATAAGTTAGAATCAGCTGTTGAAATGAAACCTGTTGATATTAAGTGTGAACAAGGCATTTGGGACAGttttcaagAATCAACTACTGATGTCAAACTGGATAATTACCCTTTGGAAACACCGATGTACAAATGTGGATTGTGTCCGTTTGAGTCAAAATTTAGTTCGAGTGTTAAGCGTCATGTCTTGACCCACCAGGATTCTGCAGGCATGGTAGTGTATAATAGTGAAACATGTACATATGAGACAATTCATACATCCCATGTGTACAATCACATAttgattgataaaaaaatgtttaaatgtgaaTTGTGTGCATATAAGTCAAAACGTAAGAGTTGTCTTACAAAACATATGTTGAAGCATGAAAATCCCTCAGAAGTCAAAATATTCAGGTGTGAAATATGTACCTTTGAAACATATTATAGAAGTAATTTTAATGAACATAAATTGGTCCATAAAAGCCCCTCAGAACTAACAATGTTTAAGTGCAAAACGTGTGCGTATGAGGTAAAACGTAAACGTGATTTGAAGAGGCACATGTTGACACATGAGAAGCCCTCAGAGATAGCAATGTTTAAGTGTGGACTGTGTACATTTGAGGCAAGACGTGGGCGTGATCTTGAGAAGCATTTGCTGAAGCATGAAAATTCGTCACAGGTGACGCAGAAAATGTACCACTGTGAAGATTGTTCATTCGAGACATGTTACAAATATAACCTTGTCGAACATAATTTGACCCATAAAAGCCCTTCAGAGATAGAAATGTTCAAGTGTGAATTGTGTACGTTTGAGGTAAAACGTAAACGTGATCTTAACAGGCACATGttgacacataaggatccttcagagatAACGATGTACAAATGTGAACTATGTACATACAAGGCAAAACAGAAGCGTGATCTTAATAGGCATGTGTTGACACATGAAGATCCATCAAGGGTGACAAAATTCAAATGTGAAGTGTGTGAATTTGAGACAATACaTGCCTGGAGGTGGTTTCTTACCTGCAGCGTAGCTGTGTGTGGCAATAATAGTGAAAAGGTGAAAAAATGTGGGCAAAAATTACTCTCTTTCATTCATTTCCTATTGGATCTGAGTATATCCAAGGAAACTGTGATGTGTATTGAATGCGCAGATGAACTTCAAGAGTTCTATAATTTGAAATCGACCTGTGTTGATATGAGGGCGAGGGCGTTATCTTCAACAGATCTAAAAAACGATGTTAATTTGGATTCAGGAAAGattgaaaatacaaataatcTGGAACGTGTTATGGAACCCAAAGATGAAATAAGATGTAGTTTTTGTACAACGTCAACTGAAAGAGAAGACCTTATATCATTACATGAATCAAAGGAAAATATTTTCTTGATAGATATTTTGAAGAAACATATTTTGGAATtgaaatctATTAACATTGGAGAAATTTTAACTTGCGAAACCTGTCTTGGTAGAGTGCAAAGTGTTTCAAGTTTTTTAATTAAGTGTATGGATGTggaagagaaaataaataaatatgcagaAATAGTAGGAACGACTGGTAAAGGGCAGATAGAATTACAGgagatacaaaaatttataatcgAGCCAATGTTAAAATTTGAAAGTGAGCCCTATTACGTAAGCGATAGGACATATGACCCCATTCAAGAAGGATTTACTGTGAAAACTGAAAGTGAAATAACATATGAAATGGAAGTGGACCAGCTAGAAACCTTCATTAAAACAGAAGAAGTTGACATTAAATCAGAACAAAGCGATTGCGATagcTTTCAGGAACCATCTACTGAAATCAAACTGGCTAACAATTGGTCATCGAGAAAAGCGTTCAAGTGTGAAATGTGTGCGTTTGAGACAAAATATAAGAAATGTCTAAACCAACATAAGTTATCCCATGAAAATCCTTCGGAGATAAAATTTACATGTCAATTGTGCAAATATGGCACAAAGTATAAGGGTTCACTTAAGTCACACATGTTGGTCCACAAAAGCCCTTCAGACGTAATACTTTATAAGTGTGACACTTGTACATACGAGACAAAACATAAGTGTGATCTTGATCAACATAGATTGATCCACAAAGACTGCTCAGAGATAATAATGTTCAAATGTGAAATATGCCCGTTTGAAGCAAAAAGTAAGGGCCGTCTTAATCAACACAGATTAGTCCATAGTGATCGCTCGAGGATAACATTGTATAAGTGTGAATTATGTACACATGAGACAAAGCACAGAGGCAATCTTAAGCTGCACATGCTAACCCATAAAAATCCCATAAAGATAACTATGCACAAATGTAGTATATGTACATATACGACAAAACGTAAAACTAATCTTAGTCAGCACATGTTAGCACATAAAAATACTTCCGATGTCAAAATGTATATGTGTGAAATGTGTACGTATGAGACGAAATATAAAGCTGGTCTTAAGCATCACATTCTGACCCATAAAAAGCCTTCAGAGGTGAGGATGTACAagtgtaaaatatgtacataccAGTCAAAGTTTAAAGCTACTATTGCCAGGCACAGGATGGTTCATAAGAATCCTTCAGAGAAGACAATATTCAAATGCGAAATGTGTACTTATGAGACTAAATATAAAGGTAGTCTCTATTCACACATGTTAAATCACAAAAGCCCTTCAGAAATAACAAAGTATAAATGTGACTTATGCGACTATGAGACAAAACATAAGGGCTCACTGACGCCCCACATGTTGATCCACAGAAGTTTTTCAGAGGTAACAACGTATAAGTGTGACACTTGCACATATGAGACGAAACGTAAACAGGCTCTTAGTGAACATAAATTGACACATAAAGATTCTTCAGAGATAATAATGTTCAAGTGTGAACTGTGTACATTTGAGACAAAATATAAGAGCGGTGTTAATAAGCATGTAAAGGTCGTCCATAAAGATATTGTAAAAACAACTCCGTATAAATGTGGATCATGTACTTTTGAAACAACACATGAGCGATATCTTAACCGACACAAATCATGCCACACAAGACCTTCAGAGGCAATAATATATAAGTGTGATACTTGTACATATGAGACAAAAAATAAGTATCATCTTAATAAACATAAATTGGTCCATAAAAGTCCCTCGGAGATAACAATGTTTAAGTGCGACATCTGTTCATTCGAGACCAAATGGAAGGATGCTCTTAATCGACATAATATGTGGACACATAAAAGTCCCTTGGATATGACAAAGTTCAAATGTGAAATTTGTGCTTTTGAGACAAAACGTAAGAGCCATCTTAATGATCACAAATTGGTCCATAAAAGTCCGCTAGAGATAACAATGTTCAAGTGTAAAATTTGTACATTCGAGACCAAAAGGAAGAGTGCTCTTACGAAGCACAATATGTTGATACATGGAAGTCCTGCGGAGATAACAATATTCAAATGTGAAATTTGTGCATTTGAGACAAAACATAAGTATTGTCTTAAAAGACACACATTAATCCACAACAGACACTCAGAATCAATCTATAAAAGCCTCTCGCAGAGAACAACATTCAAGTGTGGAATGTGTACATTTGAAGCTATAAGTAAGCATGATATTACGAATCACATGTTGACACATAAAAGCCCTTCAGAAGGACAGATCAAGGTGAAATGTGTCCCTTTGAGACCCTACGTACAGTGCCAGGTTAACAGATTAACAAGTTTGCTCCTAGGCTAG
Protein Sequence: MNNLQVFLTLKSACVDIREKSLNFTELQNNVSVNPVDTEKNTDNLKSVGEPRDEIRCSFCTSTGQQRLISLYESKENMFMVDMLEKHIPELNMCNTEELLTCETCLNKMQTVSNFLTNLLYVEEKISKYMEIEQVDFKGQIELQDVQQFKIEPTLKCEGDSCQINELEQTYEQIQENYPMKVETEVGYKIEVDKLESAVEMKPVDIKCEQGIWDSFQESTTDVKLDNYPLETPMYKCGLCPFESKFSSSVKRHVLTHQDSAGMVVYNSETCTYETIHTSHVYNHILIDKKMFKCELCAYKSKRKSCLTKHMLKHENPSEVKIFRCEICTFETYYRSNFNEHKLVHKSPSELTMFKCKTCAYEVKRKRDLKRHMLTHEKPSEIAMFKCGLCTFEARRGRDLEKHLLKHENSSQVTQKMYHCEDCSFETCYKYNLVEHNLTHKSPSEIEMFKCELCTFEVKRKRDLNRHMLTHKDPSEITMYKCELCTYKAKQKRDLNRHVLTHEDPSRVTKFKCEVCEFETIHAWRWFLTCSVAVCGNNSEKVKKCGQKLLSFIHFLLDLSISKETVMCIECADELQEFYNLKSTCVDMRARALSSTDLKNDVNLDSGKIENTNNLERVMEPKDEIRCSFCTTSTEREDLISLHESKENIFLIDILKKHILELKSINIGEILTCETCLGRVQSVSSFLIKCMDVEEKINKYAEIVGTTGKGQIELQEIQKFIIEPMLKFESEPYYVSDRTYDPIQEGFTVKTESEITYEMEVDQLETFIKTEEVDIKSEQSDCDSFQEPSTEIKLANNWSSRKAFKCEMCAFETKYKKCLNQHKLSHENPSEIKFTCQLCKYGTKYKGSLKSHMLVHKSPSDVILYKCDTCTYETKHKCDLDQHRLIHKDCSEIIMFKCEICPFEAKSKGRLNQHRLVHSDRSRITLYKCELCTHETKHRGNLKLHMLTHKNPIKITMHKCSICTYTTKRKTNLSQHMLAHKNTSDVKMYMCEMCTYETKYKAGLKHHILTHKKPSEVRMYKCKICTYQSKFKATIARHRMVHKNPSEKTIFKCEMCTYETKYKGSLYSHMLNHKSPSEITKYKCDLCDYETKHKGSLTPHMLIHRSFSEVTTYKCDTCTYETKRKQALSEHKLTHKDSSEIIMFKCELCTFETKYKSGVNKHVKVVHKDIVKTTPYKCGSCTFETTHERYLNRHKSCHTRPSEAIIYKCDTCTYETKNKYHLNKHKLVHKSPSEITMFKCDICSFETKWKDALNRHNMWTHKSPLDMTKFKCEICAFETKRKSHLNDHKLVHKSPLEITMFKCKICTFETKRKSALTKHNMLIHGSPAEITIFKCEICAFETKHKYCLKRHTLIHNRHSESIYKSLSQRTTFKCGMCTFEAISKHDITNHMLTHKSPSEGQIKVKCVPLRPYVQCQVNRLTSLLLG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -