Lqua003051.1
Basic Information
- Insect
- Leptura quadrifasciata
- Gene Symbol
- ZNF131
- Assembly
- GCA_963675555.1
- Location
- OY776673.1:65173891-65203879[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 30 1.3 2.4e+02 4.6 1.0 2 23 37 58 36 58 0.87 2 30 0.2 37 7.1 1.9 1 23 64 86 64 86 0.97 3 30 0.0044 0.82 12.4 5.1 1 23 92 114 92 114 0.91 4 30 5.1e-06 0.00095 21.6 3.4 1 23 120 143 120 143 0.98 5 30 0.21 39 7.1 5.0 3 23 157 177 155 178 0.93 6 30 0.072 13 8.5 3.1 2 23 225 246 224 246 0.96 7 30 0.019 3.6 10.3 2.9 1 23 252 274 252 274 0.98 8 30 0.006 1.1 11.9 2.3 1 23 277 299 277 299 0.95 9 30 9.2e-05 0.017 17.7 1.9 1 23 305 328 305 329 0.97 10 30 0.017 3.1 10.6 2.4 1 23 340 363 340 363 0.95 11 30 2.1e-05 0.004 19.6 0.5 3 23 374 394 372 394 0.97 12 30 1.7e-05 0.0031 20.0 1.8 1 23 400 422 400 422 0.98 13 30 6.4 1.2e+03 2.4 0.8 1 10 428 437 428 442 0.84 14 30 0.072 13 8.5 3.1 2 23 476 497 475 497 0.96 15 30 0.019 3.6 10.3 2.9 1 23 503 525 503 525 0.98 16 30 0.006 1.1 11.9 2.3 1 23 528 550 528 550 0.95 17 30 9.2e-05 0.017 17.7 1.9 1 23 556 579 556 580 0.97 18 30 0.017 3.1 10.6 2.4 1 23 591 614 591 614 0.95 19 30 2.1e-05 0.004 19.6 0.5 3 23 625 645 623 645 0.97 20 30 1.7e-05 0.0031 20.0 1.8 1 23 651 673 651 673 0.98 21 30 2 3.8e+02 4.0 0.3 1 12 679 690 679 694 0.86 22 30 0.0056 1 12.0 0.3 3 23 728 748 726 748 0.93 23 30 0.00065 0.12 15.0 6.9 1 23 754 776 754 776 0.98 24 30 0.0029 0.54 12.9 1.7 1 19 779 797 779 800 0.89 25 30 0.0063 1.2 11.9 2.8 1 23 805 828 805 829 0.96 26 30 0.72 1.3e+02 5.4 4.6 1 23 840 863 840 863 0.95 27 30 0.00052 0.096 15.3 0.6 3 23 874 894 872 894 0.97 28 30 1e-05 0.0018 20.7 0.9 1 23 900 922 900 922 0.98 29 30 0.00044 0.081 15.5 0.3 1 23 928 950 928 950 0.99 30 30 0.00021 0.039 16.5 0.4 2 21 957 976 956 977 0.91
Sequence Information
- Coding Sequence
- ATGGCGAAAACCAAGCACGCGAAGAAGCCGCAGCTGCCAAAGTCCaaacaaaaatattgtaaatcCAAGAAAAACATAATGGAGCCCCTCGAGTTGGATGAACCAATTAAGTGCAAACTCTGTAATGCttcttacaaaaataatatcGACTATGCGTTTCATTCGAAAAAACACGATAAAGATCGTTTTTATTCTTGTCATTTATGTGATTATAAAAATGTGTCAAAAACTCCCTTTGAATCGCATATGAGAGCTCACGAAGGCATAAAAAAGTACAAATGTGAAATTTGCAACAAATCCTTCAGGCAAAGCCGACATGCTTTTGAACATAAATTTTTTCATAGTGGGGAGAAACCTTTCCAGTGTGAAATTTGTGGAAAGCACTTCACTTTCTCCAGAAGCCTAGCCACGCATCGCCGGACTTCACACTACGAGATTGTAACAGGCAAACCTCTTATAAAGTGGGATTGTAAACTATGCAGTAAACATTATGAAAGTCACTCCGGTTTAGTTAGACACAATTCCATGCACCATAAAGAGCTAGGTGTTGGTTGGATAAAAGGGAAAAAGAAGAAGCTCTCATCGGCCAGGAAGAAGAAAGAAGAACCTGAACCAGAAATAGATGAGAAAGCGAGCAAGCTTATCAACCTTTTGAAAATAATCGATCCACTGAAATGCAGATCGTGTACCAAAACATTTTCCAATCATAACGATATGGCATTGCATTCAAAAGTACATAATAAAGATCGTCAATACACTTGCCACTTATGTGATTTTACTGTTAATTCCAAGTTCCGTATTCAGAGACATATAAGAGGGCACAGTGGATATAAGTGTGAAGTATGCAAGAAGACTTTCAGAAGAGGTACTAGTGCTCTCAAACACTCCTATACGCACTCTGGTGAAAAACCTTATCAATGTGAAATTTGTGGAAAGCACCTTGCAAACGCCAAAAGTTTGTACACACATCTTAATACCATACACCACGAAATTATAACTGGGAAGCCTTTAGTGAAATACGATTGTGTCGTTTGTAAAAAGCATTATGAATCAGAGACTGGACTAAGGAGACATTACTCCAGCAAACATAAGGAACTTGGCGTTGACTTGTCTGTAATTTGCGAAATTTGTGGTAAAAGAATATCGAGCAATACTAGACTGAAGCGTCATATTAGAACACATACTGGACAAAAACCTTATCCCTGCCTTGTATGTACTAGAAGTTTCGCAACTAAATGTCTATTAACATCTCACATGCGTGTCCATACTGGCGAGAAACCGTTTGTTTGTATGTACTGTGGCAAAAGGATAAAAGGGAAAAAGAAGAAGCTCTCATCGGCCAGGAAGAAGAAAGAAGAACCTGAACCAGAAATAGATGAGAAAGCGAGCAAGCTTATCAACCTTTTGAAAATAATCGATCCACTGAAATGCAGATCGTGTACCAAAACATTTTCCAATCATAACGATATGGCATTGCATTCAAAAGTACATAATAAAGATCGTCAATACACTTGCCACTTATGTGATTTTACTGTTAATTCCAAGTTCCGTATTCAGAGACATATAAGAGGGCACAGTGGATATAAGTGTGAAGTATGCAAGAAGACTTTCAGAAGAGGTACTAGTGCTCTCAAACACTCCTATACGCACTCTGGTGAAAAACCTTATCAATGTGAAATTTGTGGAAAGCACCTTGCAAACGCCAAAAGTTTGTACACACATCTTAATACCATACACCACGAAATTATAACTGGGAAGCCTTTAGTGAAATACGATTGTGTCGTTTGTAAAAAGCATTATGAATCAGAGACTGGACTAAGGAGACATTACTCCAGCAAACATAAGGAACTTGGCGTTGACTTGTCTGTAATTTGCGAAATTTGTGGTAAAAGAATATCGAGCAATACTAGACTGAAGCGTCATATTAGAACACATACTGGACAAAAACCTTATCCCTGCCTTGTATGTACTAGAAGTTTCGCAACTAAATGTCTATTAACATCTCACATGCGTGTCCATACTGGCGAGAAACCGTTTGTTTGTATGTACTGTGGCAAAAGATCCACCGATGGAAGTACGAATAATGATAGGATAGTTAAGGAAGAATATAAAGGATCCTGCACTGTAGTGAAAAAGCAAAACAAAGTGATAAATGTTTTTGAATTAAAAGAGCCCATAATatgtaaaatttgtaataaaagttacaataataatatggACTACGCTTTACACTCAAAAGCTCACGCTACAGATTACAATTACTCTTGCCACATATGTGATAAGAAGACATGTAAAAAGGATCAATTTCAAAGACATGTTATGTCCCACAACGCTTATAAATGTGAggaatgtaataaaatttttaagaggAAATCTACAGCTTTGTATCACTCCCATAGTGGCGAAAAACTACATCAGTGTACAATCTGCGGAAAGCTATTAGGTTCATCGTGGAGCTTAAATTCGCATATCCATACTATCCATCATGAAGTTATTACAGAAGAACCATTTCAAAAATATCATTGCACCATTTGCAATAAGCATTATCTATATGAAAGCGGGTTGAAATTACACTACTCTAGCCAGCACAAAGAATTGGGTATAGATTTCTCTGTAATTTGCGCTATTTGCGATAAAAGAATTTCTTCCAAAAATAGATTGAAACAGCATCTCAGAACTCATACAGGAGACAAACCTTTCTCATGTTCTGTGTGTGGTAAAAAATTTACAGCGAAATATTTAGTAACTTCACATATGAGGGTACATACTGGCGAGAGGCCATATGTCTGTATGTACTGTGGTCAAGAATTTGCTCAAGGTGCTTCTTACAGATATCACATAAAAACTCATACAGGTGAACGTTGCTGCAATTGTCCTATATGCGGAAAAGGTTTTATTTCGAAGGGAAACATGAAAATTCATGCAAAAAAGTGCCTTGTACCTGAAAAAAATGTCTAG
- Protein Sequence
- MAKTKHAKKPQLPKSKQKYCKSKKNIMEPLELDEPIKCKLCNASYKNNIDYAFHSKKHDKDRFYSCHLCDYKNVSKTPFESHMRAHEGIKKYKCEICNKSFRQSRHAFEHKFFHSGEKPFQCEICGKHFTFSRSLATHRRTSHYEIVTGKPLIKWDCKLCSKHYESHSGLVRHNSMHHKELGVGWIKGKKKKLSSARKKKEEPEPEIDEKASKLINLLKIIDPLKCRSCTKTFSNHNDMALHSKVHNKDRQYTCHLCDFTVNSKFRIQRHIRGHSGYKCEVCKKTFRRGTSALKHSYTHSGEKPYQCEICGKHLANAKSLYTHLNTIHHEIITGKPLVKYDCVVCKKHYESETGLRRHYSSKHKELGVDLSVICEICGKRISSNTRLKRHIRTHTGQKPYPCLVCTRSFATKCLLTSHMRVHTGEKPFVCMYCGKRIKGKKKKLSSARKKKEEPEPEIDEKASKLINLLKIIDPLKCRSCTKTFSNHNDMALHSKVHNKDRQYTCHLCDFTVNSKFRIQRHIRGHSGYKCEVCKKTFRRGTSALKHSYTHSGEKPYQCEICGKHLANAKSLYTHLNTIHHEIITGKPLVKYDCVVCKKHYESETGLRRHYSSKHKELGVDLSVICEICGKRISSNTRLKRHIRTHTGQKPYPCLVCTRSFATKCLLTSHMRVHTGEKPFVCMYCGKRSTDGSTNNDRIVKEEYKGSCTVVKKQNKVINVFELKEPIICKICNKSYNNNMDYALHSKAHATDYNYSCHICDKKTCKKDQFQRHVMSHNAYKCEECNKIFKRKSTALYHSHSGEKLHQCTICGKLLGSSWSLNSHIHTIHHEVITEEPFQKYHCTICNKHYLYESGLKLHYSSQHKELGIDFSVICAICDKRISSKNRLKQHLRTHTGDKPFSCSVCGKKFTAKYLVTSHMRVHTGERPYVCMYCGQEFAQGASYRYHIKTHTGERCCNCPICGKGFISKGNMKIHAKKCLVPEKNV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -