Lqua045911.1
Basic Information
- Insect
- Leptura quadrifasciata
- Gene Symbol
- ZFY
- Assembly
- GCA_963675555.1
- Location
- OY776677.1:146199941-146231984[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 20 0.0068 1.3 11.8 0.2 1 23 101 124 101 124 0.93 2 20 0.0048 0.89 12.2 0.1 2 23 131 154 130 154 0.96 3 20 9.8e-05 0.018 17.6 0.4 1 23 160 182 160 182 0.98 4 20 0.086 16 8.3 0.4 2 23 194 215 193 215 0.94 5 20 1.7e-06 0.00031 23.1 0.9 1 23 244 266 244 266 0.98 6 20 3.1e-06 0.00058 22.3 0.3 1 23 272 294 272 294 0.98 7 20 2.8e-05 0.0051 19.3 0.6 1 23 300 323 300 323 0.97 8 20 0.0004 0.075 15.6 3.3 1 23 333 356 333 356 0.97 9 20 3.3e-06 0.00062 22.2 1.2 1 23 450 472 450 472 0.98 10 20 0.00026 0.049 16.2 2.2 1 23 478 500 478 500 0.99 11 20 0.0013 0.23 14.1 0.4 1 23 506 528 506 528 0.99 12 20 5.5e-05 0.01 18.3 3.1 1 23 609 631 609 631 0.97 13 20 1.6e-06 0.0003 23.2 2.0 1 23 637 659 637 659 0.98 14 20 4.1e-05 0.0076 18.7 0.1 1 23 665 687 665 687 0.97 15 20 1.1 2.1e+02 4.8 1.3 1 23 693 716 693 716 0.82 16 20 0.22 42 7.0 0.3 1 23 1012 1034 1012 1034 0.97 17 20 4.8e-06 0.00089 21.7 1.9 2 23 1042 1063 1042 1063 0.97 18 20 7e-06 0.0013 21.2 3.6 1 23 1069 1091 1069 1091 0.98 19 20 3.4e-06 0.00062 22.2 1.1 2 23 1095 1116 1094 1116 0.96 20 20 0.16 29 7.5 2.6 1 23 1122 1145 1122 1145 0.91
Sequence Information
- Coding Sequence
- ATGTTAGGCAGTACTCAGTTGCTTAACTCCAGTGACGAAAAAGATTTGTCGACATATGTGGTAATTCCACTAGACTCACTGAAGAATTCCGAGGACCATGGGGACTTGGAAGttatacaaaatattattatcaaaCAGCTGGAGGATGGGTCGATATGCTTAGTAGATGAGGGAAAGCAAAATGCATATCAAGAGGAATGTCCTTTGCCCATTACAACTACAACACCAAGTATCAACAGTGACTTTTTGCAAAATACACCAGCTAGAGACCATATAAGATGGCATAAATGCCAAAAGAAGTTCAAGTGCCCAAAATGTTCTACTGGCTACAACATAGAGAACAACCTGAAAATTCACATGGTCCTCGTGCATTCAGAAAAAAGTAACACACAGTGCCCCATTTGTGACGTCAACTTAACATTTAAACGGGCTGCTAGTTTAAAGTCACATTTAATTCTACATCAAGTGGAAGAATTCTATACTTGCGATGAATGTGATAGGGAATTCGATAAAGAGgatGATTTTATGAAACATGTGGAAACTCATGTCactgtaaaaaaatacaaagagaAACCTCTAACATGTTCCTATTGCAAAGTCGAATTCCAAAATGTTAAAGAACTCAGGGACCACGTGTCAGATCACATGAAATTAAAGAAGACTTTTTCTAAACCGAAGAGACCACGACCGAAGAGACCACGGAAGTCTGGGCCTGAAAAGGGCAACAACTATGTTTGCTTTGTGTGCAATAAAAGTTTTAATAGAAACTCTCTGCTGGTGAGACATGAACGGATTCACAGTGGGGAGAAACCATATGAGTGTGAGATTTGTGATCGTGAATTTACTCAAAAAGCGACGTTGCAGATCCATTTAAGTAGACACGCTGGCCTTAAACCGTTTTCCTGTACTTTATGTCCGGCTAAATTTAACCAGAAAGGTAACTTGCGTGTGCACATACAAAGGACGCATACCGTTCCAAGCGAAGgccaaaaaatgtacaaatgctGGCAGTGCACTTGCATCTTCAAAAATATCTCCTCTTTGAACAGACACATGACCATGTCTCATCTTACTAGAGTGGACAATACAGCCACACCTGGTGCACAAGATAACTTGACTGATGAAACTGAGCTGCAACTGAAAGAATTGCAGAAACAGATTTCTTCCACCCCCAATAAGGATGAGAACACagataaaaataaggaaaatcaaCTGATGGAGGGAGTAATCGTCGAGGATAATTTGAAGGAAGTTCTGGATTTTGCTCATTTGAGTGAATCGTTTAATGTTGGTACTACGGTGCGGAAGCACTTGGTGACACAAAAGAAGATTGGAGATGTTCGATGGTATTTCTGCAACTACTGTTCGAAGCAGTTCAAGAGACCATTGGATTTAATTAGACATATCAGGGTGCATACGAGAGAAAAACCATTTAAGTGCAAACAGTGCAAGGATGCATTCTCATTGAAGTCGACGTTGATTTCTCACATGAAAACCCACAGAAGCAAGTTAGATTACAGATGTAAAATATGTAATTCTTCCTTTGTTTCCCTTGGAATATTAAATGCACATCTCAGAAAACATGACTTTGATTCACTTCCAAAATGGCAGTGTATTACCTGCGACTATTTATTTGATGAGCTGGAAAAAGGATGTAAGCATAGAGAGGAAAAGGGGCATGATGATAAGCCTCATATTATACAACCTTTTATGCGTAATATTTTAAAGCAACCTTTGCACGAAACGGCATATGGTTCTCTACCATTAAAACCTGCAAAACAGGGATTCCCAAATACTGACACGGAATTTCCCACCATCAAGCCTTTCCATTGTACCATCTGTGATGCAAGATTTACCAGAAGAATTAACTTAAAAAGACATGTACAATACCATAATGGAGAAAGAAACTTTAAATGTAATATTTGTCCCAAGACTTTCATAACATCCTATAAACTGAAGGTACATCAGAATTACCATAATAATGTAAAGAACTATCCTTGTACGGTGTGTGGCAAACGATTTGTCACAGCCTCCATATTGAAGAGGCATGTCATTAGTCACAATACTCGCAAGCTTTACCAATGCCCATACTGTATGAAAATGTTCAAAATCTTACCTTTGTGCAGAACGCACATTAATGAAGTACATAAGAAGGATGTAGTTTCAAAAGATCTACAAACAAATTCCGAAAATCTTGAGATCCAACAATTCCTTCCAAGTTCAAATAATTCCTTACAGATTTTAAATACAAATGTTGATGAAGATCCAAACAATTACCAGACGATTTACCTCAATATTGTTGAGCTACCACCATCCCCGAATTTGAATTCTCCAATTCAACCGCCATTAAAATTGCAAAACACAGATGCCCTTCTCATGAATCCAACGAATGACTTGCAAGAGGAAAGCATCAAATTCGACATAAATTCGTTAAAGTCTGAATTAGACTTGCCTCCCGATGAAATTTTCACCAACTCCCACAACGAAAATATCGATGTTTCTAAAGCCAACAACACCTCTCTACCTAACATCGCGGAGACTTCAACCAAAAGCTTTAAGTCAGGCGGTTTTTCTGCCCCTCTCATGGACCCAATGAATGACTTACAAGACGATAGCATCAAATTCAACATTGATTCAGTAAAGTCTGAATTGGATTCGCTTTCCGATGAAACTTTCACCAACTCTCACAACGAAAATATCGATGTTTCCACCGCCAACACCACCGCTCTACCTAGCATCGCGGAGATATCAACCAAAGGCATAAAATCAGACAGTTTTTCTACCCTTCTCAAGAACTCAATGAATGACTTGCAAGACGATAGCATCAAGTTTGACATAGATTCGCTAAAGTCTGAATTAGACTTGCCTCCCGATGAAATTTTCACCAACTGTCACAACGAAAAAATCGATGTTTCCACCGCCAACACCATCACTCTACCTAGCATCGAGGATATTTCAACCAAAAGCTTAAAGTCAGACATTTTTTCGGAAGAAATTCGTACCGATAAGCCTGCAAACAGAAACCAGCCGACATATGAGTGTAGTGTCTGCCAGAAGGTCATACAGGGCAGGAACCTGTATTCTAAGCATTTAGCCTCCCACACTGGATCAAGTTTGTTACGGTCTTGCAAGTATTGCTTTAAGGACTTCAAAAAACCGTCTGATTTGataaggCACCTTCGAACACACACCGGCGAAAAACCATTTGTTTGTCATCTCTGTAATAAGAGATTCTCTCTGAAATCAACTTTAGAATCCCACATAAAAACACACAAGCAGCTCAGTTGtaatgtttgtaaattatttttctcatCAAGATCAAACCTGAAGCGCCATATGATCATACATATCGgtcagaTTACTCATCCCTGTTCATTCTGCAGCCAGAAATTTAAGACGGCTCGTAACAGAAAATCCCACGAGCTCCTGATCCATTTATCCAAGTCTGAGGAACTCGGCATGAGTAAGCACACAAGAATCACGAATGTGTTAGAATCTGTGGCATCAGAGGTTATAAAGAGTGTAAATAGCACACCTACAGATAACAGCATTCCTGTGGAGAGCAAGGACATTGTTTCAACGCAGGACGATTTGTGA
- Protein Sequence
- MLGSTQLLNSSDEKDLSTYVVIPLDSLKNSEDHGDLEVIQNIIIKQLEDGSICLVDEGKQNAYQEECPLPITTTTPSINSDFLQNTPARDHIRWHKCQKKFKCPKCSTGYNIENNLKIHMVLVHSEKSNTQCPICDVNLTFKRAASLKSHLILHQVEEFYTCDECDREFDKEDDFMKHVETHVTVKKYKEKPLTCSYCKVEFQNVKELRDHVSDHMKLKKTFSKPKRPRPKRPRKSGPEKGNNYVCFVCNKSFNRNSLLVRHERIHSGEKPYECEICDREFTQKATLQIHLSRHAGLKPFSCTLCPAKFNQKGNLRVHIQRTHTVPSEGQKMYKCWQCTCIFKNISSLNRHMTMSHLTRVDNTATPGAQDNLTDETELQLKELQKQISSTPNKDENTDKNKENQLMEGVIVEDNLKEVLDFAHLSESFNVGTTVRKHLVTQKKIGDVRWYFCNYCSKQFKRPLDLIRHIRVHTREKPFKCKQCKDAFSLKSTLISHMKTHRSKLDYRCKICNSSFVSLGILNAHLRKHDFDSLPKWQCITCDYLFDELEKGCKHREEKGHDDKPHIIQPFMRNILKQPLHETAYGSLPLKPAKQGFPNTDTEFPTIKPFHCTICDARFTRRINLKRHVQYHNGERNFKCNICPKTFITSYKLKVHQNYHNNVKNYPCTVCGKRFVTASILKRHVISHNTRKLYQCPYCMKMFKILPLCRTHINEVHKKDVVSKDLQTNSENLEIQQFLPSSNNSLQILNTNVDEDPNNYQTIYLNIVELPPSPNLNSPIQPPLKLQNTDALLMNPTNDLQEESIKFDINSLKSELDLPPDEIFTNSHNENIDVSKANNTSLPNIAETSTKSFKSGGFSAPLMDPMNDLQDDSIKFNIDSVKSELDSLSDETFTNSHNENIDVSTANTTALPSIAEISTKGIKSDSFSTLLKNSMNDLQDDSIKFDIDSLKSELDLPPDEIFTNCHNEKIDVSTANTITLPSIEDISTKSLKSDIFSEEIRTDKPANRNQPTYECSVCQKVIQGRNLYSKHLASHTGSSLLRSCKYCFKDFKKPSDLIRHLRTHTGEKPFVCHLCNKRFSLKSTLESHIKTHKQLSCNVCKLFFSSRSNLKRHMIIHIGQITHPCSFCSQKFKTARNRKSHELLIHLSKSEELGMSKHTRITNVLESVASEVIKSVNSTPTDNSIPVESKDIVSTQDDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -