Lqua003061.1
Basic Information
- Insect
- Leptura quadrifasciata
- Gene Symbol
- MAZ
- Assembly
- GCA_963675555.1
- Location
- OY776673.1:65373929-65385512[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 20 8.3e-05 0.015 17.8 0.9 3 23 38 58 37 58 0.98 2 20 2.9e-06 0.00055 22.3 2.0 1 23 64 86 64 86 0.97 3 20 0.0012 0.22 14.1 1.9 1 23 92 114 92 114 0.98 4 20 0.00017 0.032 16.8 0.3 2 23 121 143 121 143 0.95 5 20 0.00022 0.042 16.4 0.7 1 23 148 170 148 170 0.96 6 20 0.024 4.5 10.0 3.2 2 23 181 203 180 203 0.94 7 20 2.9e-05 0.0055 19.2 1.4 1 23 210 232 210 232 0.98 8 20 1.2e-06 0.00022 23.6 1.0 2 23 239 260 238 260 0.98 9 20 3.1e-08 5.8e-06 28.6 2.1 1 23 266 288 266 288 0.98 10 20 0.0018 0.33 13.6 0.3 1 23 294 317 294 317 0.96 11 20 0.00031 0.057 16.0 4.7 3 23 347 367 345 367 0.95 12 20 2.5e-05 0.0046 19.4 0.7 1 23 373 395 373 395 0.98 13 20 0.0029 0.54 12.9 1.4 1 23 403 425 403 425 0.98 14 20 0.31 57 6.5 1.2 2 23 432 454 432 454 0.94 15 20 0.01 1.9 11.2 4.2 1 23 459 481 459 481 0.94 16 20 4.3e-05 0.008 18.7 2.4 2 23 492 514 491 514 0.97 17 20 2.9e-05 0.0055 19.2 1.4 1 23 521 543 521 543 0.98 18 20 1.3e-06 0.00024 23.5 0.8 2 23 550 571 549 571 0.98 19 20 2.1e-07 3.9e-05 26.0 2.1 1 23 577 599 577 599 0.98 20 20 0.0058 1.1 12.0 0.6 1 23 605 628 605 628 0.96
Sequence Information
- Coding Sequence
- ATGATTGTTAAGCTGGCTGTAAGGTCCGATAATGAAAAATccaaaataattatattagaaaatatacaaagtaaatttgaaatggacaatatatttacaaaattaaaagccTGCGATGTGTGTGGAAAGATTTTCAAAGATACACGAAGACTTAGGAAACATCTGACGACCCACAGCAACGAAAGGCCGTTTGCGTGTAATCTTTGcgacaaaaaattcaaaagaaaacACGAAGTATTAGCGCATATGCGAGTCCATGATGGATCAATGTCCTTTGAATGTGACTTTTGTTCAAAGAAATTAAGATCAAAGGGCTCATGGACAATACATAGAAGAAGACATCTTAAAGATTATGTCGCCAAATGTGACATATGTGGCCAAGGATTTGTCACAAATCAAGAATATAACAACCATATGGGATCTAAGCATAGTACAAGCAGTCACATTTGTAACATATGCGGTAGGGGTTGTTATGATAAGGCTGCCCTACAAGGCCACATGGCGCGTCATGCTGAAGATTATGAAAGTAACCAAAGCATAAGATGTGAATTATGCAACAAATCATTCCTACAAGAGAAATATCTTAAGCATCATTTTATGAGAATGCACAAAAATGGCGGTCAATGTTTTGTATGTGATCATTGTGGGAAGAAAGTAAACTCGAAGAGGAGCTTACGTGATCATTTGCTCATTCATGACGGACTCAAACCAATACAATGCAAAGAATGTGGAAGAAGTTTTGCTTTAAGGACCACTTTAAAATTACATATGCGTACTCACACGGGGGACCGGCCATATGAATGTCCACAATGTGGAAAATGTTTCACGCAAAAGTCTCCTCTGACTGTACATATGAGATATCATACAGGAGAAAGACCTTATATTTGTAGCGTTTGCAATAATGGATTTGTGAGCAAGGGGGCTTTATCGTTACATCAAAAGAACAAACATTCATCAATgtGTAAAAAGAAGGAAACGTCCTCAGTAAATTCAGACAAATCTACATTCAATAagaaaaaaaactgtaaattaaaatgttgtgatcaGTGTggcaaattttttaaagattcgAGAAGACTTAAGAGACATCTTGTGACACATAAAGAAGAAAGACCTTATTCATGTGGCATATGCGATAAGACATTTAAGATAAAACATGCAATGTTGGTACATATTAGAATTCATGATACATCGGCTGCTAAGTCGTTTGAATGTGATTTTTGCTCGAAAAAATTGAAATCCAAAGGATCTTGGATAGTACACAGGAAAAGGCACCTTAAGGAATATGTGGCCAAATGCGAAATTTGCTGTCAGGGTTTTGTGACCAAACAAGAATACATCAATCACATTGGATCTAAACACGGTAAAACCAGCCACATTTGCAGACTTTGTAGTAGGGGTTACTGCGATAAATTTAGTTTACAACGTCATATGGTACTTCACACAGAAAATTACGGGAATAGTCCAGACATAAAGTGTGAAATGTGCAACAAAACTTTCTTCCAAGAAAAGTACTTAAGCcgtcatataaaaaaatatcatataaACGGAGGACAAATATTTGTATGTGATCACTGTGGAAAGAAAGTTAATTCCAAGAGAAGTTTACGGGATCATTTGCTCATCCACAAAGGTCTGAAACCGAATCAGTGCAAAGAGTGCGGAAAAGGTTTTGCTCTGAAAACTACCTTAAGAATACATATGCGTACCCACACCGGAGATAGGCCATACGAATGTTCTCAATGTGGAAAATGTTTTGCGCAAAAATCTCCCCTCACGGTACATATGAGGTATCATACCGGTGAAAGACCTTACATTTGCAGTGTTTGTAACAGTGGATTTGTAAGCAAAGGAACTTTGTCATTGCATCGGAAAAATAAACATGGATCGGTGTAA
- Protein Sequence
- MIVKLAVRSDNEKSKIIILENIQSKFEMDNIFTKLKACDVCGKIFKDTRRLRKHLTTHSNERPFACNLCDKKFKRKHEVLAHMRVHDGSMSFECDFCSKKLRSKGSWTIHRRRHLKDYVAKCDICGQGFVTNQEYNNHMGSKHSTSSHICNICGRGCYDKAALQGHMARHAEDYESNQSIRCELCNKSFLQEKYLKHHFMRMHKNGGQCFVCDHCGKKVNSKRSLRDHLLIHDGLKPIQCKECGRSFALRTTLKLHMRTHTGDRPYECPQCGKCFTQKSPLTVHMRYHTGERPYICSVCNNGFVSKGALSLHQKNKHSSMCKKKETSSVNSDKSTFNKKKNCKLKCCDQCGKFFKDSRRLKRHLVTHKEERPYSCGICDKTFKIKHAMLVHIRIHDTSAAKSFECDFCSKKLKSKGSWIVHRKRHLKEYVAKCEICCQGFVTKQEYINHIGSKHGKTSHICRLCSRGYCDKFSLQRHMVLHTENYGNSPDIKCEMCNKTFFQEKYLSRHIKKYHINGGQIFVCDHCGKKVNSKRSLRDHLLIHKGLKPNQCKECGKGFALKTTLRIHMRTHTGDRPYECSQCGKCFAQKSPLTVHMRYHTGERPYICSVCNSGFVSKGTLSLHRKNKHGSV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -