Basic Information

Insect: Leptura quadrifasciata
Gene Symbol: ZNF236
Assembly: GCA_963675555.1
Location: OY776677.1:146147957-146188836[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 25 0.036 6.6 9.5 0.4 1 23 127 149 127 149 0.97

2 25 0.0082 1.5 11.5 0.2 1 23 155 178 155 178 0.93

3 25 0.047 8.7 9.1 0.1 2 23 185 208 184 208 0.96

4 25 0.003 0.56 12.9 0.2 1 23 214 236 214 236 0.98

5 25 0.0074 1.4 11.6 0.2 2 23 248 269 247 269 0.94

6 25 6.3e-06 0.0012 21.3 0.4 1 23 293 315 293 315 0.98

7 25 2.3e-06 0.00043 22.7 0.6 1 23 321 343 321 343 0.98

8 25 1.6e-05 0.0031 20.0 0.9 1 23 349 372 349 372 0.97

9 25 0.07 13 8.6 3.7 1 23 382 405 382 405 0.96

10 25 7.8e-07 0.00014 24.2 1.5 1 23 498 520 498 520 0.98

11 25 0.00013 0.024 17.2 2.1 1 23 526 548 526 548 0.99

12 25 0.0023 0.43 13.3 0.8 1 23 554 576 554 576 0.99

13 25 2.1e-05 0.0039 19.6 3.2 1 23 656 678 656 678 0.97

14 25 6.3e-05 0.012 18.2 3.5 1 23 684 706 684 706 0.98

15 25 7.2e-07 0.00013 24.3 0.2 1 23 712 734 712 734 0.97

16 25 0.006 1.1 11.9 3.8 1 23 740 763 740 763 0.96

17 25 0.081 15 8.4 3.1 1 23 1021 1043 1021 1043 0.96

18 25 0.27 49 6.8 0.1 1 23 1049 1071 1049 1071 0.97

19 25 5.3e-06 0.00098 21.6 2.9 2 23 1079 1100 1079 1100 0.97

20 25 4.9e-06 0.00092 21.6 3.2 1 23 1106 1128 1106 1128 0.98

21 25 5.1e-05 0.0095 18.5 1.5 1 23 1135 1157 1135 1157 0.97

22 25 0.12 22 7.9 0.9 2 23 1164 1186 1163 1186 0.91

23 25 0.0026 0.48 13.1 3.8 1 23 1335 1358 1335 1358 0.97

24 25 9e-05 0.017 17.7 0.3 1 23 1364 1386 1364 1386 0.95

25 25 0.16 30 7.4 1.2 1 21 1392 1412 1392 1413 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	25	0.036	6.6	9.5	0.4	1	23	127	149	127	149	0.97
2	25	0.0082	1.5	11.5	0.2	1	23	155	178	155	178	0.93
3	25	0.047	8.7	9.1	0.1	2	23	185	208	184	208	0.96
4	25	0.003	0.56	12.9	0.2	1	23	214	236	214	236	0.98
5	25	0.0074	1.4	11.6	0.2	2	23	248	269	247	269	0.94
6	25	6.3e-06	0.0012	21.3	0.4	1	23	293	315	293	315	0.98
7	25	2.3e-06	0.00043	22.7	0.6	1	23	321	343	321	343	0.98
8	25	1.6e-05	0.0031	20.0	0.9	1	23	349	372	349	372	0.97
9	25	0.07	13	8.6	3.7	1	23	382	405	382	405	0.96
10	25	7.8e-07	0.00014	24.2	1.5	1	23	498	520	498	520	0.98
11	25	0.00013	0.024	17.2	2.1	1	23	526	548	526	548	0.99
12	25	0.0023	0.43	13.3	0.8	1	23	554	576	554	576	0.99
13	25	2.1e-05	0.0039	19.6	3.2	1	23	656	678	656	678	0.97
14	25	6.3e-05	0.012	18.2	3.5	1	23	684	706	684	706	0.98
15	25	7.2e-07	0.00013	24.3	0.2	1	23	712	734	712	734	0.97
16	25	0.006	1.1	11.9	3.8	1	23	740	763	740	763	0.96
17	25	0.081	15	8.4	3.1	1	23	1021	1043	1021	1043	0.96
18	25	0.27	49	6.8	0.1	1	23	1049	1071	1049	1071	0.97
19	25	5.3e-06	0.00098	21.6	2.9	2	23	1079	1100	1079	1100	0.97
20	25	4.9e-06	0.00092	21.6	3.2	1	23	1106	1128	1106	1128	0.98
21	25	5.1e-05	0.0095	18.5	1.5	1	23	1135	1157	1135	1157	0.97
22	25	0.12	22	7.9	0.9	2	23	1164	1186	1163	1186	0.91
23	25	0.0026	0.48	13.1	3.8	1	23	1335	1358	1335	1358	0.97
24	25	9e-05	0.017	17.7	0.3	1	23	1364	1386	1364	1386	0.95
25	25	0.16	30	7.4	1.2	1	21	1392	1412	1392	1413	0.94

Sequence Information

Coding Sequence: ATGTTAACTAGTACTCAGTTGCTTAACTCCAGTAATGAAAAAGATTTGTCTTCATATGTGGCAATTCCACTAGACTCGCTGAAGAATTCCGAGGACCATGGCGACTTGGAAGTTATACAAAATATTGTTATCAAACAGCTGGAGGATGGGTCGATATGCTTAGTAGAAGATGAGggGAAGCAAAATGCGTATCAAGAGGAATGTCCTTTACGCATTAGAACTACATCACCAAGTATCAACAGTGACTTTTTGCAAAATACACCAGCTAGaaatcacACTGTATTACTACATCCAAGTCAGAAAACTTCAAATCCCGATAAACGTCCTCTGGAAAGTAAATCCTTAAAAAAGCTGCTTCCAAAAGCATccgacaaaaaatttaaatgtataaaatgtgGCAATATATTCGATACACTTGTGCTTTACCGGGATCATATGAGATGGCATAAATGTCAAAAGCAGTTTAAGTGCCCAAAATGTTCTACTGGCTACAATATAGAGAACAACCTGAAAATTCACATGGTCCTCGTGCATTCAGAAGAAAGTAACACACAGTGCCCCATTTGTGATGTCAACTTAACGTTTCAACGGGCTGCTAGTTTGAAATCACATTTAATTCTACATCAAGTGGAGGAGCTCTATACTTGCGACGAATGTGATGGGGAATTCGATAAAGAGgatGATTTTATGAAACATGTGGAAACACATGTCactgtaaaaaaatacaaagagaAACCTCTAACATGTTCCTATTGCAAAGTCGAATTCCGAGATGTTAAAGAGCTTAGGGCCCATGTGTCAGATCATATAAAATTAAAGAAGACTTTCTCTAAACCGAAGAGGCCACGGAAGTCTGGGCCTAAAAAGGACAACAACTATGTTTGCCTCGTGTGCAATAAGACTTTTATCAAAAACTCTCTGTTGGAGAGACATGAACGGATTCACAGTGGGGAGAGACCATATAAGTGTGAGATTTGTGATCGTGGATTTACTCAAAAGGGGACATTGCAGATCCATTTAAGTAGACACTCTGGAGTTAAACCGTTTTCCTGTACTTTATGTCCGGCTAAATTTAACCAGAAAGgtaaTTTGCGAGTACACATGCAAAAGACCCATACCTTCCCAAGCGAAGGCCAGAAAATGTACAAGTGCTGGCAGTGCACTTGCATCTTCAAAAAAATCTCCACCCTGAACAGTCACGTGACCAAGTCTCATCTTAATAGAGTGGAGAATGCAGGCACACCTGTTGCACGAGATGATTTAATTGACGAAGTTATGCTGCAACTGAAAGAATTAGAGAAACAGACTTCCTCTATCCCCATTAAGGATGAGAATACagataaaaataaggaaaatcaaCCGAAGGAGGGAGTCATCGTCGAGAATAATTTGAAGGAGGTTCTGGATTTTGCCCATTTGAGTGAATCGTTTAATGATGGTACGGTGCGGAAGTACTTGGTGACGCAGAAGAAGATTGGAGATGTTCGATGGTATTTCTGCAACTACTGTTCGAAGCAGTTCAAGAAACCATCGGATTTAATTAGACACATCAGGGTGCATACAAGGGAAAAACCATTTAAGTGTAAACAGTGCAAGGATGCATTCTCATTGAAGTCGACGTTGATTTCTCACATGAGAACCCACAGAACTAAGTTAGATTACAGATGCAAAATATGTAATTCTTCCTTTGTTTCCCTTAGGATATTAAATGCACATCTCAGAAAACATGATTTCGATTCACTTCCGAAATGGCAGTGTATCACCTGCGGGTATTTATTTGATGAGCTGGAAAAAGGATGTAAGCATAGAGAGGAAAAGGGGCGTGATAAGCCTCATGTTATACAGCCTTTTATACATAACATTTTAAAGCAACCTTTGTACCAAACGGCATATGGTTCTCTACCGTTTAAACCTCCAAAACCGAGATTCCCAAATACTGGCATGGAATCTCCCACCGTCAGGCCTTTTCATTGTACCATCTGTGATGCGAGATTTACCAGAAGGATTAACTTAAAAAGACATATACAATACCATAATGGAGAAAGAAAATTTGAATGTCACATGTGTCCCAAGACTTTCATAACATCCTATAGACTGAAGGAACATCAGAATTACCATAATAATGTAAAGAACTATCCTTGTACGGTGTGTGGCAAACGATTTGTCACAGCCTCCTTATTGAAAAGGCATGTTATTAGCCACAATACTCACAAACCTTACCAATGCCCGTACTGTACGAAAACGTTCAAAACATTACTTTTGTGCAGAACGCACATTAATAAAGTACATAAGAAGGATGTAGTTCCAAAGtttgtcCCAGAATCCAATGAACCCAACTCAAATACCCTCATTGAAAATAACAACCTTGAACCCACCACCAAATATCTTCCCAATCAAAATTCTGACGTCACCATAAACAGGACTCTACAGGAAGTCCAAGCAAATaatGCAGATACCCTTCTTATGAACCCCATGAATGACTTGCAAGACAATAACATCATATTCAACATAGATTCTTTAAAGTCTGAATTAGACTTGCCTCCTGTTGAAATTTTCACCAACTCTCACAACGAAGATATCGATATTTCCACCGCCAACACCACCACTCTACCTAGCATCGCGGAGATTTCAACCAAAAgcttaaaattaaacagtttctCGGAAAAAACTCTCACCGATAAGTCTGCGAATATAAACCAGTTATTGGACAACAACCCTAGTCTATACTCAAACGTAGAGTTTACCGAAGGTCTTAGTCTACCCATGAGTGTAGCAGAGGGTACCAACGTCTTTAGTACGACTACTCCAACAACTATCTTCCAGCCGACTACGTCCACAGACCTGAACCATACAGAAGATATTTACGAATCCACTAATATAATGTGCATAACCTGCAGCAGATTGTTTTCCACTTTGGAGAGTTTCCAGATGCACCCCTGCGATTTACTTACGGAGGAAACTAATAAAGCCGAAACTACTGATTTAGAAGAATCGGAACAGGTTTTAAATAACGTTGACGAAAATAGTGGCGATGCAAATAACCCTGACACCGAGGAACTGTTTGAATGTCATATTTGCAAGAAAATCTTGGCAAACAAGTTATCTTATAGCAGGCATGTGATTCATCACGAGTCTAAACCGACGTATGAGTGTGGTGTCTGCCAGAAGGTTATACAAGGCAGGACCCTATATATTAAGCATTTGGCGTCTCACACTGGATCAAATTTGTTAAGGTCTTGCAAGTATTGTTTTAAGGACTTTAAAAAACCGTCTGATTTGaaaAGGCACCTTCGAACGCACACCGGCGAAAAACCATTTGTATGTCATCTCTGTGATAAGAAATTCTCTCTGAAATCGACTTTAGAATCCCACATAAAAACACACGATCCCTCTCCCAAGCAGTTCAATTGTAATGtttgtaattcatttttctcaTCAAAATCAAGCCTGAAAGTACACATGACCATACATACCGgtcaGAGAACTCAGCCCTGTTCATTCTGCAGCCAGAAATTTAGGACAGCTGGTAACAGAAAAACCCATGAGCTCCTGATGCATTTATCCAAATCTAAGAAACGTGGTACGAGTAAGCGCACAAGAATCACAAATGTGTTAGAATCTGTGGCATCAGAGGTTATAAAGAATGTAAATAGTACTCCTACAGATAACAGCGTTCCTGTGGAGAGCAATGAAATTGTTCCAGCGCAGGACGATTCATCAAGTGCAAATTTGGAAGTACTTCCACAGCAAATAATAAATCTCTCGGATAATCTCCTACCAAGTTTGCCTGAGGATCAACTCTCCATAATGCTTCTACAGCAGCTGCAGATGTCCGGGGTGATTTTAACCAACGACAGTAGTGAACCCGGGTCATCCTTGATGTTAGACGACGTCACGCTGCTGAATGTCGAAAATTCTAAAGATAACGTGGTTATTTCATTACCTCCTAGTAACGTCCCTATTAGCGAAGACAGTTTGCTGAAGCCCGAGAAACCTAAGACTTTTGAGTGCGACATTTGCCACAAAATGTACACTTCTAAGCAGATACTGAGGAAACACAGAAAGAAGATTCACGGAGTGAATAAGAAGTATCCCTGTATTAAGTGCGATAAGGGATTTGATACGCAAGATGAACTCAACAAGCATATAAAATTGCACGCTGGATATCGACCGTTTTCCTGCTTGTATTGTGCGAATAGTTTTACAGAGGAGCATAGCTTAAAGACTCACGTCAAaaggtaa
Protein Sequence: MLTSTQLLNSSNEKDLSSYVAIPLDSLKNSEDHGDLEVIQNIVIKQLEDGSICLVEDEGKQNAYQEECPLRIRTTSPSINSDFLQNTPARNHTVLLHPSQKTSNPDKRPLESKSLKKLLPKASDKKFKCIKCGNIFDTLVLYRDHMRWHKCQKQFKCPKCSTGYNIENNLKIHMVLVHSEESNTQCPICDVNLTFQRAASLKSHLILHQVEELYTCDECDGEFDKEDDFMKHVETHVTVKKYKEKPLTCSYCKVEFRDVKELRAHVSDHIKLKKTFSKPKRPRKSGPKKDNNYVCLVCNKTFIKNSLLERHERIHSGERPYKCEICDRGFTQKGTLQIHLSRHSGVKPFSCTLCPAKFNQKGNLRVHMQKTHTFPSEGQKMYKCWQCTCIFKKISTLNSHVTKSHLNRVENAGTPVARDDLIDEVMLQLKELEKQTSSIPIKDENTDKNKENQPKEGVIVENNLKEVLDFAHLSESFNDGTVRKYLVTQKKIGDVRWYFCNYCSKQFKKPSDLIRHIRVHTREKPFKCKQCKDAFSLKSTLISHMRTHRTKLDYRCKICNSSFVSLRILNAHLRKHDFDSLPKWQCITCGYLFDELEKGCKHREEKGRDKPHVIQPFIHNILKQPLYQTAYGSLPFKPPKPRFPNTGMESPTVRPFHCTICDARFTRRINLKRHIQYHNGERKFECHMCPKTFITSYRLKEHQNYHNNVKNYPCTVCGKRFVTASLLKRHVISHNTHKPYQCPYCTKTFKTLLLCRTHINKVHKKDVVPKFVPESNEPNSNTLIENNNLEPTTKYLPNQNSDVTINRTLQEVQANNADTLLMNPMNDLQDNNIIFNIDSLKSELDLPPVEIFTNSHNEDIDISTANTTTLPSIAEISTKSLKLNSFSEKTLTDKSANINQLLDNNPSLYSNVEFTEGLSLPMSVAEGTNVFSTTTPTTIFQPTTSTDLNHTEDIYESTNIMCITCSRLFSTLESFQMHPCDLLTEETNKAETTDLEESEQVLNNVDENSGDANNPDTEELFECHICKKILANKLSYSRHVIHHESKPTYECGVCQKVIQGRTLYIKHLASHTGSNLLRSCKYCFKDFKKPSDLKRHLRTHTGEKPFVCHLCDKKFSLKSTLESHIKTHDPSPKQFNCNVCNSFFSSKSSLKVHMTIHTGQRTQPCSFCSQKFRTAGNRKTHELLMHLSKSKKRGTSKRTRITNVLESVASEVIKNVNSTPTDNSVPVESNEIVPAQDDSSSANLEVLPQQIINLSDNLLPSLPEDQLSIMLLQQLQMSGVILTNDSSEPGSSLMLDDVTLLNVENSKDNVVISLPPSNVPISEDSLLKPEKPKTFECDICHKMYTSKQILRKHRKKIHGVNKKYPCIKCDKGFDTQDELNKHIKLHAGYRPFSCLYCANSFTEEHSLKTHVKR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -