Lqua064482.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Leptura quadrifasciata
Gene Symbol
-
Assembly
GCA_963675555.1
Location
OY776680.1:69739471-69752663[+]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 4.7e-08 2.5e-05 26.0 0.0 1 39 334 372 334 375 0.90

Sequence Information

Coding Sequence
ATGTGGAAGAGACATCCAATAGATCCTCAAATTTTTCACACTTTGCAAACTACATCAGCAACCCTAGTTGGCAGTAAGAGTTTTGGTGAATCTATGCAGAATCAATTGGTTAATCAATGTACCGACGAGGGACTGTTCATTGATATGAACGATGTCAGCGAGGAATTCTCTGCTCTAGAAAATGCAACTTGCAATATTTGCAATTTCCGCTCTGCTCCGCTGGATGATTATTATTCGCATGAGGGATTGCCGATCATAGTAGTAACTGTGCCCCCAGATGAACACATTTCGATCAATAATGTGGAAGAGTATCCAATAGATCCTCCAATTTTTCACACTTTGCAAACTACATCCGCAACCCTAGTTGACAATAACAGTTTTGGTGAATCTATGCAGAATCAATTGGTTAATCAATGTACCGACGAGGGACTGTTCATTGATATGAACGATGTCAGCGAGGAATTTTCTGCTCTAGAAAATGTAACTTGCAATATTTCCCAGTCGTTTGGACATAGCGTACCACACATAAAACCTGATTGCAATGAAATGCAGATCAGTACAAACTGGTGTCTAGGGGGCCCGGAGAAAAAAGCAGCTAACAATGGGAGTCCAAAAATAATTAACTTAGAACAAGAGCAGGCCAGAGAACAAACAGCAGAAAAATTTTCAGGAGAAAGAAATGATTTAGAACCGGAAAGTGACTCCACTTATGAAGAAGAGAACGCACAAAATATGGACAGTGGATCAAGCAGCGACAATAAAGAAAATACCACAACGAGAAGACGTAAAAGAAAACCTGTAAAAAGACTATGGACGAGAGAACTAAATAAAAAACTGCGCGAAAGGGGACGACAGTATACTGGATttaaaaaagatgatgaaacaaaaaatataaacaaaatgctcCTAAGCCAGAGAGAAAAATGGGTCAACCATGCGATTCAAACCTTTGCAAAAAAAAAAACACCAACGAATTGCCGGGTCTCGTCTGTTGACTATACTCGTGAAACGTTAGAACAATGTCTTGACGATGTCAGAAATAAGCGCCTCACTCAGCGCCAAGCTGCAGTTAAGTATAGAATTCCAAGAAGCACCATAATCAATAAATTAAAAGGTAAATGCAGCAATATTATTGGAGGACCTACTGTATTTACTCCCCAAGAGGAACAGGGTTTCGAGAACCATGTATTAAAGCTTGCCGAGTTCGGTTTTCCTGTTACTGAACTGGATTTAAGGTTCTGCGTTAAAAATTATTTGCTCAAGAGCGGCAGAAacgtttctaaatttaaaaataatatgccAGGGACAGATTGGGTAAAATTATTTATAGCACGGCATCCTAAACTGACAAAGCGTTTTTCCTCTAACATTAAGAGAGTGAGGGCTGCTGTCAGCAAAGAAATCATAGAAGAATACCTTCAGAATTTGGAAAAAGTTATAAAAGACGTTCCTGCAGAGAATATTTGGAATTACGATGAAACTAATATGCGAGATGACCCAGGTCAGAAACAAGTAATCTGTCGTAGAGGGACAAAATATTTAGAACGCGTTTGCAACACAACAAAATCATCGACTTCTCTCATGTTTGCTGGTAGCGCCAGTGGGGAATTAACGCCTCCTTATGTTGTGTATAAGAGTGAACACATGTGGGATACATGGACAGAAAATGGACCAAAAAATTGCCATTACAACAGAACTAGTAGCGGTTGGTTCGACAGTGCTACATTTGAAGACTGGTTTATGAAACAGATGTTACCAAGGTTGAAGCGTTTGGAAGGTCCCAAAGTGATAATTGGTGATAATCTTGCTTCTCACATTAGTGAAACTGTTCTAAAAGCATGTGAGGACTTTAACATTCAATTTGTATGTCTACCTGCAAATTCTACCAATCTAACACAGCCATTAGATGTAGCAGTATCCAGGCCTGTAAAGATAGCATGGCGACGCATACTTACAGAATGGAGAGATAGCGATAGGGGGTCCCGAGTGGCTGGAATCCCAAAAGATATTTTTCTTTCACTTCTAAATAAACTAATACATGCAATAACGGATAACATAAAGGAAAATTTAAAATCCGGTTTCAGAAAATGCAGTATATATCCATTAAACAAGCATGTGTTGCTGGACAGATTTCAAAAGTATGATCGTGAAGAGGCAGATGTGAATACCATAGGAGAAGCTTTTCTAGAACATCTAGTGGAAAAAAGAAAAGATGTCGAAGGTGTTAATATTGGGgggaaaagaaagaaaaaactaACTGTGCCAGCTGGTCAAAGTATCAAAATTGAAGATTTAAAGAAAGCAGAAGaagaaaaaacaagaaaacaagAAGAAAAGGCAAGAAAAGCGGCAGATATagcaaataaaaaagaaaagtcAAGGGAGGCAAAGATGAAAAAAAAGCGTAGGCCGATTGATGAAGTAGACATTTTAGAAACTGATGATTCAGAAAATGAGCATGAAGAAATGTTACTTGCTGAACATGGAAATATATTCAGGCAAGAATGTAACTCTGGTTGCCACAACATCAAAAATCGAACAATTGGTTTTCCGTCTAATGCAGCCGTATTTTATGAAAGAACATGCATTATTTAA
Protein Sequence
MWKRHPIDPQIFHTLQTTSATLVGSKSFGESMQNQLVNQCTDEGLFIDMNDVSEEFSALENATCNICNFRSAPLDDYYSHEGLPIIVVTVPPDEHISINNVEEYPIDPPIFHTLQTTSATLVDNNSFGESMQNQLVNQCTDEGLFIDMNDVSEEFSALENVTCNISQSFGHSVPHIKPDCNEMQISTNWCLGGPEKKAANNGSPKIINLEQEQAREQTAEKFSGERNDLEPESDSTYEEENAQNMDSGSSSDNKENTTTRRRKRKPVKRLWTRELNKKLRERGRQYTGFKKDDETKNINKMLLSQREKWVNHAIQTFAKKKTPTNCRVSSVDYTRETLEQCLDDVRNKRLTQRQAAVKYRIPRSTIINKLKGKCSNIIGGPTVFTPQEEQGFENHVLKLAEFGFPVTELDLRFCVKNYLLKSGRNVSKFKNNMPGTDWVKLFIARHPKLTKRFSSNIKRVRAAVSKEIIEEYLQNLEKVIKDVPAENIWNYDETNMRDDPGQKQVICRRGTKYLERVCNTTKSSTSLMFAGSASGELTPPYVVYKSEHMWDTWTENGPKNCHYNRTSSGWFDSATFEDWFMKQMLPRLKRLEGPKVIIGDNLASHISETVLKACEDFNIQFVCLPANSTNLTQPLDVAVSRPVKIAWRRILTEWRDSDRGSRVAGIPKDIFLSLLNKLIHAITDNIKENLKSGFRKCSIYPLNKHVLLDRFQKYDREEADVNTIGEAFLEHLVEKRKDVEGVNIGGKRKKKLTVPAGQSIKIEDLKKAEEEKTRKQEEKARKAADIANKKEKSREAKMKKKRRPIDEVDILETDDSENEHEEMLLAEHGNIFRQECNSGCHNIKNRTIGFPSNAAVFYERTCII

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-