Lqua066318.1
Basic Information
- Insect
- Leptura quadrifasciata
- Gene Symbol
- -
- Assembly
- GCA_963675555.1
- Location
- OY776680.1:81541648-81543534[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.1e-08 1.6e-05 26.6 0.0 1 39 18 56 18 59 0.90
Sequence Information
- Coding Sequence
- ATGGCTAGAAAACACCAACGAATTGCCGGGTCTCGTCAGTATGTTGACTATACTCGTGAAACGTTAGAACAATGTCTTGACGATGTCAGAAATAAGCGCCTCACTCAGCGCCAAGCTGCAGTTAAGTATAGAATTCCAAGAAGCACCATAATCAATAAATTAAAAGGTAAATGTAGCAATATTATCGGAGGACCTACTGTATTTACTCCCCAAGAGGAACAGGGTTTCGAGAACCATGTATTAAAGCTTGCCGAGTTCGGTTTTCCTGTTACTGAACTAGATTTAAGGTTCTGCGTTAAAAATTATTTGCTCAAAAGTGGCAGAAacgtttctaaatttaaaaataatatgccAGGGACAGATTGGGTAAAATTATTTATAGCACGGCATCCTAAACTGACAAAGCGTTTTTCCTCTAACATTAAGAGAGTGAGGGCTGCTGTCAGCAAAGAAATCATAGAAGAATACCTTCAGAATTTGGAAAAAGTTATAAAAGACGTTCCTGCAGAGAATATTTGGAATTACGATGAAACTAATATGCGAGATGACCCAGGTCAGAAACAAGTAATCTCTCGTAGAGGGACAAAATATTTAGAACGCGTTTGCAACACAACAAAATCATCGACTTCTCTCATGTTTGCTGGTAGCGCCAGTGGGGAATTAATGCCTCCTTATGTTGTGTATAAGAGTGAACACATGTGGGATACATGGACAGAAAATGGACCAAAAAATTGCCATTACAACAGAACTAGTAGCGGTCCCAAAGTGATAATTGGTGATAATCTTGCTTCTCACATTAGTGAAACTGTTCTAAAAGCATGTGAGGACTTTAACATTCAATTTGTATGTCTACCTGCAAATTCTACCAATCTAACACAGCCATTAGATGTAGCAGTATTCAGGCCTGTAAAGATAGCATGGCGACACATACTTACAGAATGGAGAGATAGCGATAGGGGGTCCCGAGTGGCTGGAATCCAAAAAGATATTTTTCCTTcacttctaaataaattaatacatgCAATAACGGATAACATAAAGGAAAATTTAAAATCCAGTTTCAGAAAATGCAGTATATATCCATTAAACAAGCATGTATTGCTGGACAGATTTCAAAAGTATGATCGTGAAGAGGCAGATGTGAATACCATAGGAGAAGCTTTTCTAGAACATCTAGTGGAAAAAAGAAAAGATGTCGAAGGTGTTAATATTGGGgggaaaagaaagaaaaaactaACTGTGCCAGCTGGTCAAAGTATCAAAATTGAAGATTTAAAGAAAGCAGAAGaagaaaaaacaagaaaacaagAAGAAAAGGCAAGAAAAGTGGCAGATATagcaaataaaaaagaaaagtcAAGGGAGGCAAAGGAGATGAAAAAAAAGCGTAGGCCGATTGATGAAGTAGACATTTTAGAAACTGATGATTCAGAAAATGAGCATGAAGAAATGGAATTAGAATCTGATACATTGAGCGAAACATTTAGTGATTTAGATGACAATGAAACCGTTCATATAAATTCTCCTTTCTTTACCTTGCAACAAAGAAGAGAATTAAAGAAGGATAACTATATAACAGTACTTTATGATCAACAAGAATATCCAGGTATTGTTAAGAAACTACCCACTGGTGATGAGAAAGGACCTATTGTTAGCTGTATGCAGAAATGTGGAAATAGTTGGAGATGGCCAGAAAAGGAAGATGCAATGGAATACGAATGGTCCGACATCGTCAGAAAAATTGCACCTCCTAAACTGTTGACAAAAAGAGGGTTTTTTAATGTCTCAGAATTAAattgttttgttaaaaattaa
- Protein Sequence
- MARKHQRIAGSRQYVDYTRETLEQCLDDVRNKRLTQRQAAVKYRIPRSTIINKLKGKCSNIIGGPTVFTPQEEQGFENHVLKLAEFGFPVTELDLRFCVKNYLLKSGRNVSKFKNNMPGTDWVKLFIARHPKLTKRFSSNIKRVRAAVSKEIIEEYLQNLEKVIKDVPAENIWNYDETNMRDDPGQKQVISRRGTKYLERVCNTTKSSTSLMFAGSASGELMPPYVVYKSEHMWDTWTENGPKNCHYNRTSSGPKVIIGDNLASHISETVLKACEDFNIQFVCLPANSTNLTQPLDVAVFRPVKIAWRHILTEWRDSDRGSRVAGIQKDIFPSLLNKLIHAITDNIKENLKSSFRKCSIYPLNKHVLLDRFQKYDREEADVNTIGEAFLEHLVEKRKDVEGVNIGGKRKKKLTVPAGQSIKIEDLKKAEEEKTRKQEEKARKVADIANKKEKSREAKEMKKKRRPIDEVDILETDDSENEHEEMELESDTLSETFSDLDDNETVHINSPFFTLQQRRELKKDNYITVLYDQQEYPGIVKKLPTGDEKGPIVSCMQKCGNSWRWPEKEDAMEYEWSDIVRKIAPPKLLTKRGFFNVSELNCFVKN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01369305; iTF_01369249;
- 90% Identity
- iTF_01369305; iTF_01369249;
- 80% Identity
- -