Basic Information

Insect: Leptura quadrifasciata
Gene Symbol: clz9
Assembly: GCA_963675555.1
Location: OY776676.1:18956179-18958329[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 2.4e-10 1.3e-07 33.4 0.0 2 43 17 58 16 60 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	2.4e-10	1.3e-07	33.4	0.0	2	43	17	58	16	60	0.93

Sequence Information

Coding Sequence: ATGGTGCGAAATTACATACGTAAAAGTACCAGGGGCCAAAGATATTCAAAAGAAGAGTTCCAACGGGCTATTCGAGATATTCAGGCAGGCGTTACAACAGCTTCCAGAGCAGCTCTACAGTACAACATACCAAAAAGTACTTTAAATGATCATTTAAAGGGACGAAGGGGTGTTAAAAGTACTAGTTACGGAAGATGTACAGATATACCGAAAAATGTTGAAGAGAAGATAGCAGAAGGACTACGAGTAATGGATAAATGGGGGTTTGGGCTCTCTCGTAGAGAAGTATTGGACAAGGTAGGGGAATTCGttgaaaaaagtaaaattaagacccagtttaaaaataatagacCTGGTGCGGATTGGTTCATTAAATTTAGAAAGAGACATAAGCTTTCTCTTAAGAAACCTCAAGGGGTAGAAGtggcaagaaaaaataaacagttaaatCCTTTCGCTATTCAAGGATATTTTATTCTCCTagaagaaacattaaaaaaattaaagttagaaggCAAGCCAGATCAGATCTGGAACCTAGATGAGACTTCTTTTGCTTCAGATCCATCGAAAACCAAAACAGTAGGTCCGATAGGAATACCTTCTACAAGAATGACGAGTGGTCCTGGACGGGAGAACACCACTGTACTCATGGCCTGTAGTGCTTCGGGGGCAAAATGCCCACCATTAATTATATATAAGGGCAAGAACATTTGGGATGAGTGGGTTGCACCAGATGAGTTCTCTTATCCTGGTACATCCTATGCGGCAACGAAGAAGGGGTGGATAGAGTCAgatgtgtttttaaattattttaaaaaaaccttcTTACCAAACATAGGACCACACCGACCAATCCTTCTCATATATGACGGACAAACAACCCATCTTTCCGTAGAGGTTATAGAGACAGCGATTGAAGAAAATATTACAATCTTAAAACTTCCACCCCATACAACACATATCTTACAACCCCTTGATCTTTCGGTATTTGCATCATTGAAAACTAGATGGGATGCAAGTTTAGTCAGTTGGCAACGAAAACATCCCGGcaagaaaattccaaaaaaatctttttcaacattaattgGTCAGATATGGAAAGAAACAACGGAATCTGTATTAATAAATGGCTTTCGAAAGGCAGGAATTGTTCCATTTAATAAAGAGATAATATCTGAAGATAAGTATGACCCGGCTGCTCTAAAGCGATGGAAGGAGCACTTAAAAAAATTGGCTGATACAACTAAAACAATATCCCCAGGAGCTGAATCCGAAGGATCTCAGACAACCCATCAAATTGAGGCCGCAAAAACCAAGACAATACAACAAATAGAAGCAGTGGCAGAAAACGGTTCAGTAAACATGCCGTCGACATCGTCGAGTAAGGAAGTATCGGTGATGACTGAAAATCAGGAAATTTCATTCGCAGAAATTTTGCTTTCGACAATGAGAGCCTCAGCCAACGATTTATTAGAAAGGAAGAAGCCTAAAAAAACAAGAGTTGGACCAGGGGCAGAGGTTATTACTGCATCTGAGGTATTAGAACGTTTAAAAGAAAAAGATAAGCCACCGACTGCAGCTAAAGGAAAACGTCGAAGCCAAGTTGAAGAAATAGACGAAAGTGCAGTAAAAGATGCGGATCCCCCTGCACCTGACGCAAtagaacatttaaaacaaaaaaatacgtcgGGAACTAAAAGAAAACGTTGTAGTTCTGTTGAAGAAGACAGTGAAGAGGAAGATGTAAGTTCAAACGATTCAGTAGATTTAGAAGATAGTGATGAATCTGAGACTTTGGAAGACTTCTTTAATAACATTCGAGAAGAAGAACAAGATTTGAAAGATTTAGAGAGAAATATAAATGAAAAGGAAGTCAACGATTGGATTTTGGCTAGATTTCCCGGAAAAAAATCAGTAAAGCACTATGTAGGCCAAATAATTTCTATGAATGACATAGGGGAACCAACTGTGAAATTTGCtagaaaatcaaattattttaaaaaaagttcagtGTTTAGGTTTCCTGTAATCGATGATATTTCTGAAGTTTCAAATAATGACATCGTTATCTTACTACCCAATCCTACCTTTGGACGGAGAGGCGAAATTATATTTCAAGTGTCTTTTCATTCATTTAATATTGAATAA
Protein Sequence: MVRNYIRKSTRGQRYSKEEFQRAIRDIQAGVTTASRAALQYNIPKSTLNDHLKGRRGVKSTSYGRCTDIPKNVEEKIAEGLRVMDKWGFGLSRREVLDKVGEFVEKSKIKTQFKNNRPGADWFIKFRKRHKLSLKKPQGVEVARKNKQLNPFAIQGYFILLEETLKKLKLEGKPDQIWNLDETSFASDPSKTKTVGPIGIPSTRMTSGPGRENTTVLMACSASGAKCPPLIIYKGKNIWDEWVAPDEFSYPGTSYAATKKGWIESDVFLNYFKKTFLPNIGPHRPILLIYDGQTTHLSVEVIETAIEENITILKLPPHTTHILQPLDLSVFASLKTRWDASLVSWQRKHPGKKIPKKSFSTLIGQIWKETTESVLINGFRKAGIVPFNKEIISEDKYDPAALKRWKEHLKKLADTTKTISPGAESEGSQTTHQIEAAKTKTIQQIEAVAENGSVNMPSTSSSKEVSVMTENQEISFAEILLSTMRASANDLLERKKPKKTRVGPGAEVITASEVLERLKEKDKPPTAAKGKRRSQVEEIDESAVKDADPPAPDAIEHLKQKNTSGTKRKRCSSVEEDSEEEDVSSNDSVDLEDSDESETLEDFFNNIREEEQDLKDLERNINEKEVNDWILARFPGKKSVKHYVGQIISMNDIGEPTVKFARKSNYFKKSSVFRFPVIDDISEVSNNDIVILLPNPTFGRRGEIIFQVSFHSFNIE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00885846;
90% Identity: iTF_00885846;
80% Identity: iTF_00885848;