Basic Information

Gene Symbol
Kdm5
Assembly
GCA_963675555.1
Location
OY776682.1:60531978-60546655[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 8.8e-25 1.2e-20 75.8 0.0 2 89 117 200 116 200 0.94
2 2 0.034 4.7e+02 3.4 0.0 26 75 1240 1288 1223 1300 0.71

Sequence Information

Coding Sequence
ATGACCACAAAGGTAGAAAAACAGATGAATGGTAATAATGGCATTAAAAACCATCCTGGAAGTTCAAAAAATTCTCCGGTAAAATGTAATGATCATTACTCCCAATATAAAGAAGAAACATTTCAATTTGAAGTACCACCAGAAGCCCCAGTTTTTTACCCTACAGAAGAAGAATTTCAAGACCCTTTAGCCTACATTGCAAAAATTAGACCTATAGCCGAAAATACAggaatttgtaaaataaaaccaCCTGCACATTGGCAACCACCATTTGCTGTAGATGTTGATAAATTAAGGTTTACACCCAGGATACAGCGATTAAACGAGTTAGAGGCAAAAACTCGTGTTAAATTAAACTTCTTAGACCAGATTGCCAAATTTTGGGAACTGCAGGGCTCTTCTCTTAAAATTCCTATGGTAGAACGAAGAGCGCTAGACTTATACACTTTACACAGAGTTGTTCAAATAGAAGGTGGCTTCGATTGTGTTACCAAAGATAGAAAATGGTCAAGAATATCCCAGAGAATGGGGTATCAAATTGGAAAAAGTATTGGAACTATATTGAAGACACATTATGAAAGATTACTTTACCCATTTGATGTATTCAAACAAGGGAAAGCTGTCAGCATAaAAATCGAACATGGTTCAGAAGACACTGAAAAGGCTGATAAAGACTACAAACCCCACGGTATTGTAAGTCGAATGCAAATCAAACCACCGCCTGAAAAAAATGCAAGGCGATCCAAGCGTTTTGAAAATGACGAAAGCAAGACTGAAAATTTAGCGCTTAagataaaagaagaaaaaaatgacgATGATGAAGTTGGAAATAAGGAACTTAGACGTCTGCAGTTTTATGGCGCTGGCCCAAAAATGGCTGGTTACGATGATAAAAAAGATGTTAAACCTAGAAGCAAGAATATCAAATACGATTTTGACCCATTAGCCAAATATGTTTGCCATAATTGTAATCGTGGCGATGCAGAAGAATACATGTTATTATGTGATGGTTGCGACGATAGTTACCATACATTTTGCCTTATGCCTCCTTTGTCAGAAATACCGAAGGGCGACTGGCGTTGCCCTAAATGTGTAGCTGAAGAAGTGTCCAAGCCTATGGAAGCATTTGGTTTTGAGCAAGCTCAACGTGAATATACCCTACAACAATTTGGGGAAATGGCAGATCAGTTCAAATCTGAATACTTCAATATGCCTGTACATatggTTCCAACAAGTACCGTCGAGAGAGAATTTTGGAGGATTGTATCCTCTATAGACGAAGATGTTACGGTCGAATATGGAGCGGATTTACATACCATGGACCACGGCTCAGGTTTTCCTACTAAATCATCTAGCAATCTTTTTCCCGGAGACAAAGAATATGCCGAATCGAGCTGGAATTTGAACAACTTGCCTGTATTAGAGGGCTCTGTACTTGGATACATTAATGCTGATATATCAggaatgaaggTTCCTTGGATGTATGTTGGAATGTGTTTTGCTACTTTCTGTTGGCACAATGAGGATCATTGGAGCTATTCAATCAACTATTTACACTGGGGTGAGGCTAAAACTTGGTATGGAGTTCCTGGCAGTAAAGCCGAATCGTTTGAAGAAACGATGAAGTCTGCTGCTCCAGAACTATTCCACTCGCAACCTGATTTGCTACATCAGTTGGTAACAATAATGAATCCAAATATTTTAATGAATGCTGGTGTACCAGTGTACAGAACAGACCAACACGCTGGGGAGTTTGTTGTCACGTTCCCAAGAGCTTACCATGCTGGATTCAATCAAggCTATAATTTTGCAGAAGCCGTTAATTTTGCTCCAGCTGATTGGCTACGTATGGGACGTGAATGTGTTCTGCATTATTCTCACCTGAGACGTTTCTGTGTATTTTCTCATGACGAGTTAGTCTGTAAGATGGCGTTAGATCCAGAAAAATTAGACTTAACTATCGCAGCTGCCACTTACCAAGACATGCTTGTTATGGTAGATACTGAAAAGAGGCTAAGGAAAATTTTATTAGATTGGGGGGTAACAAATGCAGAACGTGAAGCCTTCGAACTCCTCCCAGACGATGAACGACAATGTGAAATTTGTAAGACTACATGTTTCTTGTCAGCAATGACGTGTAAATGCTCTTCAGAAATTTTAGTTTGCCTTAGACACTACAAGAATTTATGTGAATGCCCACCACAAAATCGCACCCTGCGTTACCGTTACACACTAGATGAATTACCAGTTATGTTAAAGGCATTAAAATTAAAGGCAGAATCATTTGATCATTGGGTAGCGCGGGTGAAAGATGCCTTAGATCCGAAAACACCAAAAACTCTTAATCTTTCCGATTTGAAAGCCTTATTGAGTGAGGCTGATGGAAAGAAATTTCCGAAATGTGACTTACTTCAAACTCTAACCAGTGCCGTAGAAGATGCTGAAAAATGTGCCAGTGTTATACACCAATTAGATCTAAATAAAATGCGTACAAGAACTAGAAACTCAAATGACACAAAGTACAAACTCACTGTTGAAGAACTAACTTTATTTTGTGAGGAAATTGACAGTTTAGCTTGTATTCTAGAAGAGGCAAAAAGCATTAGAGAACTACTCCAGCAGACAAGAAGATTCGAGGAAAAAAGTGAACAACTATTACAACTGCCTTTAGCAGAGTGTTCAGTTCCTGAGTTGGAGACTTGTAGTTCTCATGGAAATGGGCTATGCATCGAACTACCCAATTTACGTCTTATTGCAACTAGATTGAAACAAGTTCAGTGGCTCCGAGATGTAGAAATTTATAAGAACAAAACGGATGTTCTAGGTTTGGATGCTATTAGACATCTTATACAAGATGGCATTCTATTACCACCTCACCCTGAAATGGAAGAAGAACTGTCCAATCTACAAGGGATATTACAGACAAGCGAAGAATGGGAAGAACAAGCTGCTGAGGTTTTAAAATCTGAAGACAATAACGTGTTGATCCAGGTGGACAAATTACTTAAAGAAGCCTCAAAAATTAAATGCTTCTTACCTACAGAAGGGCACTTATTTGAGTCGATGAAAAAAGCTAGAGATTGGTTAAGGTTACTGGAGGAAATGAATTCTGCAGAATATTATCCTTATTTTAGTGCAATGGAAGAATTAATAAAGAAAGGTCGAGGATTATCTCTTCATTTAGTGGAAGTAGACAGAATGAATGACTACTTGGTTTTAGCAACTGGTTGGAAGGAAAAGACCAGTCGAGCATTTTTACGAAAAAATTCATCTTGCTCACTGATGGAAGCATTATCACCTAGAATTACAATCccaaattcaataaaaaataacaaaaagagcAAGTCTGTGGATGAAGATCTTAATATAATAGCGCTGACTAATGCAATGGATCCGGCTGCAGTAGTAGCCGTATTTAAAGATGCTGAGGACACAGAAATGTCCATGTTGAGAAAGTTGCGTGTCGCTAATTTGTCTAAGAGCTTAGATCCCAATGAAGGAAATACCTTTTGTGTCTGTGGAAGAGGTTTGTTTGGGATAATGATGCAATGTGAATTATGTAAAGACTGGTTCCACTCGACATGCACTCAGCTTCCAAAAGTAGCAACCACAAAGTACAAAGGTAATTTCACAAATGTAGCGTTACATTTGGGTTTTAAAGACTGTAAATTCCTGTGCCCAAACTGTCAACGTACAAAGCGACCTCGCTTAGATGTTATTTTAGGTTTACTAATgtctttacaaaaattatatgttAGGGTTCCTGAAGGTGAAGCTTTGCAGTGCCTCACAGAACGTGCAATGAATTGGCAAGATCGGGCAAGACAACTGTTGCAACATCCTGAACTTGAAAAGGCTAAAAATAAGCTTTCCTTGTTTAGTCAAAAGTATAATGAAGCTGCTGCAAGGCAAAGAACAGAGAAGATTATTTCAACAGAATTAAAAAGAGCCTCTAAAAACCCCGAGTTGCATCAAAGAGTCCAAGAAATAACTCCCTTTAGTGGCGTAACGGAGGATGGTGTTACATGCGATAGCGGTATTAATGACTCTGATGAAGCCTCTAGAGAGTCTAAAGATTCCGATGATCGCATGGGAGAACACGCTTACTCGTTACATCTACCAAAAGTTGGAGATGGAGAGGACTATGTTTTAGAAGTCAATTCAGATGTTAGGGATCAACTAGAAGAACTTCTCACGGAAGGAGATCTATTAGAAGTTTATCTGGATGAAACATTCGCTTTGTGGAAGCTTATGCAGGCATCACGGGATCCAGAAAGAGAAGCCATACTTATTGACTTTGATgcACATATGAAGAATATGCCCAAAAAAAGAGGACGTAAACGCCTCTCCGAGGAAATAGACTTGGGCAAAAAATTGATCAAAGCGATAAAACTTGAAGGTGAAAAAAAGATGCGTGGACGTAAAATCAAAGATAACAAAGAAATTGGCCATAAGAAACGTGGTAAGCGAAGGGTTAGGCGTTGTCAGTCTACTGCATCCGACAGCGATGACGATGAAGATGACGAAACTTGTGCAGCAAATGGTTGCCAGAAACCCACGGGACAGAATGTGGATTGGGTACAGTGCGATGGGGGTTGTGAACAGTGGTTCCACATGGCCTGTGTTGGTTTATCGGCAGAGGATATAAATGAGGACGAGGATTATATTTGTATAACATGTTCAAGGACGACGACCTACGAAAATTTAAATGACAGTAGATCGAGTAGTCCGAGATCTCCAGATTCAACTCAGCCTTCCACCTCTAAAGACATTTCATAG
Protein Sequence
MTTKVEKQMNGNNGIKNHPGSSKNSPVKCNDHYSQYKEETFQFEVPPEAPVFYPTEEEFQDPLAYIAKIRPIAENTGICKIKPPAHWQPPFAVDVDKLRFTPRIQRLNELEAKTRVKLNFLDQIAKFWELQGSSLKIPMVERRALDLYTLHRVVQIEGGFDCVTKDRKWSRISQRMGYQIGKSIGTILKTHYERLLYPFDVFKQGKAVSIKIEHGSEDTEKADKDYKPHGIVSRMQIKPPPEKNARRSKRFENDESKTENLALKIKEEKNDDDEVGNKELRRLQFYGAGPKMAGYDDKKDVKPRSKNIKYDFDPLAKYVCHNCNRGDAEEYMLLCDGCDDSYHTFCLMPPLSEIPKGDWRCPKCVAEEVSKPMEAFGFEQAQREYTLQQFGEMADQFKSEYFNMPVHMVPTSTVEREFWRIVSSIDEDVTVEYGADLHTMDHGSGFPTKSSSNLFPGDKEYAESSWNLNNLPVLEGSVLGYINADISGMKVPWMYVGMCFATFCWHNEDHWSYSINYLHWGEAKTWYGVPGSKAESFEETMKSAAPELFHSQPDLLHQLVTIMNPNILMNAGVPVYRTDQHAGEFVVTFPRAYHAGFNQGYNFAEAVNFAPADWLRMGRECVLHYSHLRRFCVFSHDELVCKMALDPEKLDLTIAAATYQDMLVMVDTEKRLRKILLDWGVTNAEREAFELLPDDERQCEICKTTCFLSAMTCKCSSEILVCLRHYKNLCECPPQNRTLRYRYTLDELPVMLKALKLKAESFDHWVARVKDALDPKTPKTLNLSDLKALLSEADGKKFPKCDLLQTLTSAVEDAEKCASVIHQLDLNKMRTRTRNSNDTKYKLTVEELTLFCEEIDSLACILEEAKSIRELLQQTRRFEEKSEQLLQLPLAECSVPELETCSSHGNGLCIELPNLRLIATRLKQVQWLRDVEIYKNKTDVLGLDAIRHLIQDGILLPPHPEMEEELSNLQGILQTSEEWEEQAAEVLKSEDNNVLIQVDKLLKEASKIKCFLPTEGHLFESMKKARDWLRLLEEMNSAEYYPYFSAMEELIKKGRGLSLHLVEVDRMNDYLVLATGWKEKTSRAFLRKNSSCSLMEALSPRITIPNSIKNNKKSKSVDEDLNIIALTNAMDPAAVVAVFKDAEDTEMSMLRKLRVANLSKSLDPNEGNTFCVCGRGLFGIMMQCELCKDWFHSTCTQLPKVATTKYKGNFTNVALHLGFKDCKFLCPNCQRTKRPRLDVILGLLMSLQKLYVRVPEGEALQCLTERAMNWQDRARQLLQHPELEKAKNKLSLFSQKYNEAAARQRTEKIISTELKRASKNPELHQRVQEITPFSGVTEDGVTCDSGINDSDEASRESKDSDDRMGEHAYSLHLPKVGDGEDYVLEVNSDVRDQLEELLTEGDLLEVYLDETFALWKLMQASRDPEREAILIDFDAHMKNMPKKRGRKRLSEEIDLGKKLIKAIKLEGEKKMRGRKIKDNKEIGHKKRGKRRVRRCQSTASDSDDDEDDETCAANGCQKPTGQNVDWVQCDGGCEQWFHMACVGLSAEDINEDEDYICITCSRTTTYENLNDSRSSSPRSPDSTQPSTSKDIS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00386968;
90% Identity
iTF_01226399;
80% Identity
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