Basic Information

Insect: Leptothorax acervorum
Gene Symbol: salm
Assembly: GCA_035220615.1
Location: JASTWQ010001266.1:891643-907304[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 2.8e-05 0.005 18.6 1.0 1 23 380 402 380 402 0.98

2 9 1.2e-05 0.0021 19.8 2.1 1 23 408 430 408 430 0.98

3 9 5.2 9.2e+02 2.0 3.3 3 23 794 814 793 814 0.92

4 9 5e-08 8.9e-06 27.3 0.6 1 23 820 842 820 842 0.97

5 9 7e-05 0.012 17.4 2.6 1 23 852 874 852 874 0.98

6 9 0.014 2.6 10.1 3.2 2 23 1168 1189 1167 1189 0.97

7 9 0.036 6.4 8.8 1.0 1 14 1195 1208 1195 1209 0.92

8 9 6.8e-07 0.00012 23.7 2.1 3 23 1433 1453 1431 1453 0.96

9 9 2.3e-07 4.1e-05 25.2 0.9 1 23 1459 1481 1459 1481 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	2.8e-05	0.005	18.6	1.0	1	23	380	402	380	402	0.98
2	9	1.2e-05	0.0021	19.8	2.1	1	23	408	430	408	430	0.98
3	9	5.2	9.2e+02	2.0	3.3	3	23	794	814	793	814	0.92
4	9	5e-08	8.9e-06	27.3	0.6	1	23	820	842	820	842	0.97
5	9	7e-05	0.012	17.4	2.6	1	23	852	874	852	874	0.98
6	9	0.014	2.6	10.1	3.2	2	23	1168	1189	1167	1189	0.97
7	9	0.036	6.4	8.8	1.0	1	14	1195	1208	1195	1209	0.92
8	9	6.8e-07	0.00012	23.7	2.1	3	23	1433	1453	1431	1453	0.96
9	9	2.3e-07	4.1e-05	25.2	0.9	1	23	1459	1481	1459	1481	0.98

Sequence Information

Coding Sequence: ATGACAAAGACGAAGACGAAAGACTCAACGGAAGTGACTTTTGAGTGTGTGAAATGGCGTATAAAGGATCCACTGAAGCTACGCACTCGCAGGTTGAGGAAGAACAAGTTACTACGTCGACGAATGCTTAGAGAAGAAAATGACTTTACATCAGACGGTGAAGAGAGCGGTGGTggaggaggaggtggcgagGAAGCCGTGGATCTCACAGCGACGAGATCTCATCAGGGCGATGATGATCCTATGGAAGAGGATGAGGAAGAAGGTATCGATGAGCAAGACGAGCAGGATGAGGACGAGGAGGGCTCGCGCAAACAGATTCATCATCGCCAAGATGCGGAGAACAATAATAACTTTGTGGAGAGCGGTCTACCTACCGCGATATTCCCGCCTGCTGGAACTAGTCACGTCACCCTCGAAGCCCTTCAGAATACAAAAGTGGCGGTCGCCCAGTTCGCTGCCACTGCTCTCACAGGGGCAGACAGTGAAGCGGCGCTACAAGACTTGGCATTTCTGGAAAACACGCTGTGCACCCTACAGAATCAACAGGTATTACAATTACAGCTGATTCGACAACTTCAGCAACAATTATTGATCACTCACGGGCAATCGGTAATGCAATCATCGGCGACGGAGCCAACTGATAGCAAAGAGGCTTCGTCGTCACCTATTATTCATCCGAAACCATTGTCGAGTCTCGCGTCACCTCCTTCTTCTCGTCCGCCGAGTcatcatcagcaaacatcaccGGCGCCGCTGACGCCGAATCTGCTTCAGGAACGACCCACCTCGACGAGCAGCGCCTCTCCTTTGAATCTACCCCTATCTACGTCCGGCGTGACGTCAACCGTCATCACGACCACCAGCAGCCAAATGCCGATGCCTCATCAAATGCCGCCGCTCTGCTCGATAAGCGCTTCCCTTGCTTCATCGATCATAACGAATACCGATCCGCCACCGCTTCACGAGCCAAACACTCTGGATATTCTTCAAAAGCGTACTCAAGAGGTATTGGATAACGCGAGTCAAGGGCTAGCCAACAATTTGGCCGACGAGCTCGCGTTTAGAGGCAAGGGCTCGCGACTATCTCCTTACGATTCAAAATCAAGCGGTGGTCGCGGCGAGCCCTTCTTCAAGCATCGATGTCGCTTCTGCGGCAAAGTCTTCGGTAGCGACTCGGCGCTACAAATCCACATACGATCCCACACAGGTGAGCGACCCTTTAAGTGCAACGTATGTGGCAGTCGGTTCACGACCAAGGGCAACCTGAAGGTCCACTTCCAAAGGCACACGGCCAAATTTCCACACGTTAAGATGAACCCGAATCCCGTTCCAGAACATTTAGATAAATACCACCCACCCCTCTTGCAGCAAATCGCTTCCGGGCAGAGGCCGATgccgtccccgccgccgccgccaccatcCTCTCATCACCCCCCGTTTCATCCGGCAACAACGCACAGTTTCCTCCCACCACAACCGCCCATGCCTTTGAGTCTCACATTATCCAATATGACGCCTCTTTACCGGTCCCCAGTTATTAATCACCGGGACGATCAAGATGTGCCGGAGAATCTTAGTAAACCCATAACCACCGCTCCACAGACATCTCCCACTTCTCCCGCTGCCATGTTGAATTCTCGTCATTCCTTTCACGACAATCTCCATCAACAACATCAAAAGCAGCAGCTTGAGCAGAGAGATGAGATAAAGCTCGAGCAGAGATCGCCCGGGCAGGAGCAGTATCAACAGCGACCGATGAGCCGGGAAGGCGCCGAGCGAATAACACCGAAGAGAGAACCCGAGGAAGCGGAAGAAGCCGCAGAGGAGGAGAGCGAGGATTTTGAGGAAACCACGAGACGATACCTCAATTCACCCCAATCCGCGAATCCACCGTCCCAGCCGCAAACGTACGAGGATTGTAGTATGGACAGCAAGATCAGTGGACGTTTAGAGGGCGACGGAGAGATGGAAGTGGACGAGGAGACAGAAGAGCAACCTGAGAACCTTTCGAGCAGAGGTACGATCAATCGTTTGCCTCAACAAATCGTGGCGTACCCGGGGGCATCACCAGCTAGCAGTAGCGCAAGTAGCGGTAGTCTGCAGACGTCCTTCGCCGGAATCCTGTTCCCAGGTCCGCCGGCTCATCATCAAATTCCCGGTCTTCCTGTTTCCACACAGGCAGGACCAACCACGATATCCGGGAGTGAACTGATCGATCCAGCTAAGGATCCAGCGATTTATTCGACTTTACTACCGCGGCCTGGCAGCAATGACAATTCCTGGGAGAGCCTGATCGAAATAACGAAAACTTCGGAGACGTCCAAGCTGCAGCAACTAGTCGACAATATCGAGCACAAGTTGAGCGATCCTAATCAGTGCATAGTTTGTCACAGAGTGCTCTCGTGCAAGAGCGCGTTGCTGATGCATTATCGCACTCACACGGGCGAGCGTCCTTTCAAGTGTAAAATTTGCGGCCGCGCCTTCACGACGAAGGGCAATCTGAAAACCCACATGGGAGTGCACAGAGCTAAACCACCGCTCAGAGTGTTGCACCAGTGTCCCGTGTGTCACAAGAAATTCACGAATGCTCTCGTATTGCAGCAGCACATACGCCTTCATACCGGGGAACCCACCGATCTCAGTCCGGAACAGATCCAAGCTGCAGAAGTGAACGAGTTCCCGCCCGGTTACCATCCACTGGCGTCTTTCCTCCCGCAAGGATTTGCGCCGCTACATCCGACCGGCGCGAGCTTCTCCTTGGGATTCCCTCCATCCAGGCAAACAACCATCGAGCAACAATCACACGAAAGCGACATTGACGCGAAAGAGGAGTCTCAGCACCAACGACAGAGATTTATGGAGGAGCACAGCGAGGAGATGGAAGACCAGGAGGACGAGGAGCAGGATCACAGAGAGGACGACGAGAGGTGCGAATTGAATCGCGATAGGCGTAGCATCGAAGTCGAAGAGGAGCAGGACCACGAGAGTGAAGATACGACCGAGCACAAGGACGTGACGCTTCCTATATTTTCGACCTCGTTGGCGGCGCTCGAGAATCAGGTGAGGACCATCACGACGACGGCCACGACTACGAACGTGGCCAGGTCGCCGTCGTATCTCCGGTACAACGGTAGCGAGAAGAGCACCAGCCCGCCGACCTCCGGTGCCCCGCTCGACCTGACACCCCGTGCTTCGTCCACGCCAGCGTCGGTGGCCTCAGCATCGCCGACGCCGCCACCTCAGACCGTGCCGCATCATCCACCGAATCCCTTCGGCATGTTCGCTGGACTACTGCAAGCGGTCTCGTCCTCTCCTACCACCAGCACGATAGGCACGTCGAACATAAACAGCGTCACCTCGATGAATGCCGTCAACCCGGGAAGCGGGCCCGGCAGCGGACCACTAGCCTCGCTGACCACCTCGGCGGTACTAGCCGCATCGTCGACTTACAATCCGCTCGGCCTAGCTGTCGGTGGCCCAGCAGTACGTGGCAACACCACATGTAAATTCTGCTACAAGACGTTCGCGTGCCAATCTGCATTGGAGATTCATTACCGGAGTCATACGAAGGAGCGACCTTTCAAATGCACCATATGCGATCGAGGTTTTTCCACGAAGAACGATGATTCCGGTCAGCAAGTATGTTCCTGCGCGGACCAACCCTTCGCCGCGAAGGGTCCGATCCTCCCACAACCCAATCCCCAATATCGCTCGTACCCGGCGAGATCGGCCGCCGGAAATAGTGAGAAACCGAAACGCAGGCGGCGGCGGCCTGAGGAGCGGAAGAACCGGGGGCGGACAGGAACAGGAGGGGGGCGAAGGCTGACGTCTGTTTATCCTGCCGTCCGCCTGCCCCCGCTGATGCCACCCGCCCTCGGACTTCTACCCTCGGACCACGTCTTCCTGGGTAATATGAAGCAGCATATGTTGACTCACAAGATTCGCGATATGCCGCCACATCTGTTCAGCGATCCCAAGcatcaacagcagcagcagcaacagcagcagcagcagcaaccaCTGCAGCAACCACTGCAGCAACCACTACAGCAACCGCTGCAGCAACCGCAGCAACAACCACAGCAACCgctgcagcaacagcagcaggaTCAGGAGACTTCCAGAAGTCCAATGTGCGTCGACGATTCAAGCCTACCACCTCCACCTCCGCcacctccaccacccccgccgatgCCACCAACGTCCATCGAGTCCACGATACCAGTAAAGAGATCACCGGAGGGAGAGCTGCCGGCACCGAAAAGACCAGCCAGCGTGCAGAGCAAGCATTTGTGCCAGATTTGCAATAAGAATTTCTCCTCATCCTCGGCGCTCCAGATTCATATGAGAACTCACACTGGCGACAAACCGTTCCGATGCACCGTCTGCCAGAAGGCGTTCACCACCAAAGGCAACCTCAAGGTGCACATGGGTACTCATATGTTCACCAACGGAACGTCACGTCGAGGTCGACGGATGTCGTTGGATATACCTCCCCTGCCAATCACGCCCAAGGACTCCGAGTTTCTGCAACGACGACCGGACCTCTTTTACCCGTATCTTCCCGCGCCGTTCCTTAACGGCGTCCAGCAGAAGCTGAACGAGATTTCGGTGATTCAAAGTAGCAACGGGTTACCGCCCCATTCCTTGAGCGCGGGCAAGTACGCGGCGAGCCTGTTCGGGTCGGTATACGGTGCCGGCGGGGGTGGTTTCTCCCTGGACAAACAACCGTTGGGACCGACCAGCAACGGGCCTCTGGACGGCAAGTCCGCGATACCCTCGGGATCCATGCTCTTCCAAACACCGTCGCCCTCGCACTCGCCCGGCGCGTCGTCCAACGGCGGCAATCAGACGTCCGCCAGCGTGTCCTGGACCGGCGATACCCTTCAACATCATTTCGACCGTGAAACGCCGAGCAGAACCGAGAATGACGCCACCCCGCCCACAGCACGGCTACCACCGCCACCGGCGAGGGGAGAGGGATTAGCCGCGTGA
Protein Sequence: MTKTKTKDSTEVTFECVKWRIKDPLKLRTRRLRKNKLLRRRMLREENDFTSDGEESGGGGGGGEEAVDLTATRSHQGDDDPMEEDEEEGIDEQDEQDEDEEGSRKQIHHRQDAENNNNFVESGLPTAIFPPAGTSHVTLEALQNTKVAVAQFAATALTGADSEAALQDLAFLENTLCTLQNQQVLQLQLIRQLQQQLLITHGQSVMQSSATEPTDSKEASSSPIIHPKPLSSLASPPSSRPPSHHQQTSPAPLTPNLLQERPTSTSSASPLNLPLSTSGVTSTVITTTSSQMPMPHQMPPLCSISASLASSIITNTDPPPLHEPNTLDILQKRTQEVLDNASQGLANNLADELAFRGKGSRLSPYDSKSSGGRGEPFFKHRCRFCGKVFGSDSALQIHIRSHTGERPFKCNVCGSRFTTKGNLKVHFQRHTAKFPHVKMNPNPVPEHLDKYHPPLLQQIASGQRPMPSPPPPPPSSHHPPFHPATTHSFLPPQPPMPLSLTLSNMTPLYRSPVINHRDDQDVPENLSKPITTAPQTSPTSPAAMLNSRHSFHDNLHQQHQKQQLEQRDEIKLEQRSPGQEQYQQRPMSREGAERITPKREPEEAEEAAEEESEDFEETTRRYLNSPQSANPPSQPQTYEDCSMDSKISGRLEGDGEMEVDEETEEQPENLSSRGTINRLPQQIVAYPGASPASSSASSGSLQTSFAGILFPGPPAHHQIPGLPVSTQAGPTTISGSELIDPAKDPAIYSTLLPRPGSNDNSWESLIEITKTSETSKLQQLVDNIEHKLSDPNQCIVCHRVLSCKSALLMHYRTHTGERPFKCKICGRAFTTKGNLKTHMGVHRAKPPLRVLHQCPVCHKKFTNALVLQQHIRLHTGEPTDLSPEQIQAAEVNEFPPGYHPLASFLPQGFAPLHPTGASFSLGFPPSRQTTIEQQSHESDIDAKEESQHQRQRFMEEHSEEMEDQEDEEQDHREDDERCELNRDRRSIEVEEEQDHESEDTTEHKDVTLPIFSTSLAALENQVRTITTTATTTNVARSPSYLRYNGSEKSTSPPTSGAPLDLTPRASSTPASVASASPTPPPQTVPHHPPNPFGMFAGLLQAVSSSPTTSTIGTSNINSVTSMNAVNPGSGPGSGPLASLTTSAVLAASSTYNPLGLAVGGPAVRGNTTCKFCYKTFACQSALEIHYRSHTKERPFKCTICDRGFSTKNDDSGQQVCSCADQPFAAKGPILPQPNPQYRSYPARSAAGNSEKPKRRRRRPEERKNRGRTGTGGGRRLTSVYPAVRLPPLMPPALGLLPSDHVFLGNMKQHMLTHKIRDMPPHLFSDPKHQQQQQQQQQQQQPLQQPLQQPLQQPLQQPQQQPQQPLQQQQQDQETSRSPMCVDDSSLPPPPPPPPPPPPMPPTSIESTIPVKRSPEGELPAPKRPASVQSKHLCQICNKNFSSSSALQIHMRTHTGDKPFRCTVCQKAFTTKGNLKVHMGTHMFTNGTSRRGRRMSLDIPPLPITPKDSEFLQRRPDLFYPYLPAPFLNGVQQKLNEISVIQSSNGLPPHSLSAGKYAASLFGSVYGAGGGGFSLDKQPLGPTSNGPLDGKSAIPSGSMLFQTPSPSHSPGASSNGGNQTSASVSWTGDTLQHHFDRETPSRTENDATPPTARLPPPPARGEGLAA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00417805;
90% Identity: iTF_01421750;
80% Identity: -