Lace043914.1
Basic Information
- Insect
- Leptothorax acervorum
- Gene Symbol
- -
- Assembly
- GCA_035220615.1
- Location
- JASTWQ010001265.1:1964164-1966672[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 6 1 3e+03 -0.1 0.0 3 17 168 182 166 184 0.88 2 6 0.81 2.3e+03 0.2 0.0 23 45 223 247 211 248 0.70 3 6 2.4e-12 7e-09 37.1 0.2 1 45 254 300 254 301 0.95 4 6 6.4e-07 0.0019 19.7 1.4 3 44 309 354 308 356 0.95 5 6 1.2e-11 3.4e-08 34.9 0.0 1 46 362 408 362 408 0.94 6 6 1.5e-09 4.3e-06 28.1 0.0 4 38 416 450 414 451 0.94
Sequence Information
- Coding Sequence
- ATGAGCGAAGGTGACGACTCGGATATCCTAGCCGATATCCAGGCTCTGGATGAAGCTTTAGCGTTGAACGCGAGAAATAGATCCCAGCAACATGTTAGCAGCAGCGAACGATTTGAGGCATTGTCGGGTGCCGAGGATTCAGAAGAGGATGTCCTCAGAATTGAGGAAAACGATGACTATGTTGACTATCTCTGCACGAATCAGTATATCGACAAATCTCTGAACGCTTACGAGATTAATACAAGGTTGATCACAGGCTTGACGATAACCAAGAAGAAATTGACTATTTTACTGGAAGAGTGCGAGCAGCAGATAAAGCTACTGGACGAGAAAATAATGAACTCCAAGGATGAGTCGCGTTTAGGTTCTAAATTGACAATCAGCAACGCCGGTATGCCATATTTTAAAGACAAGAATTACTTCAGCGCTCCTAACAACTACGACACCAAGTTAAAGCAGGCCCGTGGCGAGTTATTTCTCCCGTCTTTGAAAAAGCCGAGTCGTTGGACGGGAAAGGATAGAGAAACGCTTTTAAACGCCATAAACAATCAAGCTATCGAATCGGTACTGAGCGGAGAATTCAGCAAAGACGATGATAAAACTAAATTAGTGCTCCCCAGAAATTTTAATGAGATGGTAGGAGCGGTCGGTGAGAGAGAGTTTGATTGGCATAAGATCTCTGTTATAGATTTCGACAATAAGCATTCACCAGTCGAATGCCGAGCTATGTGGAATATCTACCTGCATCCTGACTTCAAGAAGGATGAATGGACGAGCGCGGAGGATGCTGAACTACGGAAATATGCGAGAGAATACAAGTATCAAGATTGGGATGCTATTGCGCATAAACTAGGAACAAACCGTAGTGCGTACCAAtgttttattagatataataccATCAAGAAAACGCCGTCAGCCGGGCATGCTTGGACCAAACAGGAGGATAGACATCTCAAGAAAGTTATACAAGCAGTCCGTATCGGTAATTACATTCCCTGGTGCGAGCTCGCCAATCATATGCGGCACAGAACCAAGCAACAAATTTATGTACGATGGATGTACAGGAAATCACCGCATTTGAAAAAAGGTAGATTTACTGACCCAGAAACGGCGACTCTCATGAAAGCGGTGCAGAAATATGGCACGAACTTCCCTAAAATTGCAAGCACCGTAATGCCAAATCGAACTTCGGTACAACTCCAAGAACGTTACCGTACGGtgttgaaaaagaataatttaaatctaTGGACAGTCGACGACGATGTGGCATTAATTAATCTGCACATGAAATATCGCAACAATTGGTCCAAGATAGCcacgtatttttttaacaagTCAAGAATACAGGTTGGAAGAATTTGCTCCTTTGGAAATTACTGTACGACTATCAGGTTGAATCTCCGTTCGGAAATGAGCAAGACTCAGAACAAACGACAAATTCTCGTCCTGAGAGTGCTGAATACCAGCTACTGCGAACTCGCCTActgcaattatttaaatttcccATAA
- Protein Sequence
- MSEGDDSDILADIQALDEALALNARNRSQQHVSSSERFEALSGAEDSEEDVLRIEENDDYVDYLCTNQYIDKSLNAYEINTRLITGLTITKKKLTILLEECEQQIKLLDEKIMNSKDESRLGSKLTISNAGMPYFKDKNYFSAPNNYDTKLKQARGELFLPSLKKPSRWTGKDRETLLNAINNQAIESVLSGEFSKDDDKTKLVLPRNFNEMVGAVGEREFDWHKISVIDFDNKHSPVECRAMWNIYLHPDFKKDEWTSAEDAELRKYAREYKYQDWDAIAHKLGTNRSAYQCFIRYNTIKKTPSAGHAWTKQEDRHLKKVIQAVRIGNYIPWCELANHMRHRTKQQIYVRWMYRKSPHLKKGRFTDPETATLMKAVQKYGTNFPKIASTVMPNRTSVQLQERYRTVLKKNNLNLWTVDDDVALINLHMKYRNNWSKIATYFFNKSRIQVGRICSFGNYCTTIRLNLRSEMSKTQNKRQILVLRVLNTSYCELAYCNYLNFP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -