Basic Information

Insect: Leptothorax acervorum
Gene Symbol: bab1
Assembly: GCA_035220615.1
Location: JASTWQ010000452.1:3527733-3530602[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 9.7e-12 9.7e-09 36.2 0.0 1 45 429 473 429 473 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	9.7e-12	9.7e-09	36.2	0.0	1	45	429	473	429	473	0.96

Sequence Information

Coding Sequence: ATGACTGCCTCTCAGCAGTACTGTCTGCGATGGAACAATCATCGCTCGAATCTGCTGACCGTCTTCGGCGAGCTGCTGCACAATGAAGCGTTCACCGATGTCACCCTCGCCGTCGAAAGCGGTAGGACGCTCAAGTGCCATAAGATCGTGCTGGCTGCGTGCTCGACGTACTTCCAGAATCTGTTCCACGGCCTGCAGCATCAGCACCCGATAATCATTCTCAAGGATGTTGGGTTTCCGGAGTTAGAGGCGATACTGGAGTATATGTATCGCGGCGAGGTGAACGTGGCGCAGAACCAGCTACCCGATCTGCTGAAGATCGCCCAGGTGCTGAAGGTGAAGGGCCTGGTGGAGGAGCACGGTAACCAGAGCGGCACCGCGCGCGACCTTCGCCGCGAGGATACGATGGACCCGTCGATATCGCCGCCGCCGGCTATCAGCACGAGCACCGGTGGTAGCGGCGGCAGCTACTCGTCACCGCCGCACTCCACCGGCGGCTACTCCGCCCTTTATGGGAAATCCGCGGTCCCGCTCGACCGCGCTCAAAGTCACCTCGCGGGCTCGTTGCCGATTACGTGGCCGCTTCCGTTCCACTCCGGCGCGGGTCATCAGCTTCCGACatcgctctcctcctcttccgtCCTCGCTGGCGGTGGCGGCGGATACGACAACGGTATCGAGACCTCGCCGCTCAAGCGCCGGAAGCTGATGCAGTCGTCAACCCTGGTGATGAACAGCGACACGCGGGATCCGCGGGACCCGCGGGACCTGCGGGACACGCCGATACTGCGCACGGTGCTCGGTCAGGCTCACGCTGACAGTTCGCAGGCGATGCCGCTCCTGCAGCCGGACAGCCACGAGTCGGTGCACTATCGCAACGCGAGCAGCAACGGATCGGCAAATGACAGCGACAACCGCCGCAGCAACGACCTGGCCCACTGCGAGACCGCCCACGCCGATGTTTCCTACATGGACGAGGATGAGAGACAGCCGTCCCCGCAGTCGTACGGCGGGGATACTGTGAGGAATACAGGTAGCGATAGCACGTCAAATATCATGTCAGGGATTGCAGCTGCagattttgtaatgttatacgCTGTATGTTGTCAATATCTACAAACTATAAGGCAAACGACAAATTTACCCTTTACGTCGTGCGCACAAAGCTCATCGGAAGATCATAGCGTTAGAAGAACTACTAACGTGATTACTGAAGATGAAGGAGCTGCTGCGGACGGCGCGGGCGTCCCGCAGAAACCAGAGTGGAAACGCTATAAGCAGTACACCCGAGATGACATCACGTCGGCGATCGACGCAGTGAAGATGGGGATGAGCGCCGTCGCGGCAGCGCGAAAATACGGCGTGCCATCGCGCACGCTTTACGACAAGGTGAAAAAGCTCGGCATCCCGACGTCGCGGCCGTTCAAGCGCTCGGCGAGCAACGGGGGTAGCACGGCCTGCTTCCCGTACGGCATCGGTGCCAACGCGAACGGCGCTCTTTACGACAACAATCGCGCCAGTGTTAATGCCCTGTCCGAGAATGAGAACGAGAGCACCAGTAGTAACATCAATATTGGCGAGAGTTTGGCCGGCACTAGTACCACAGTTCTTGAGACCACTTTTGAGACCACCTATGCAAAGGCGACGAAGGATACGTCGCAGGACCGCGACTCAATGTCAGACTCGATGGCTCGTTGCAGCGTGAGTCCGGTGATACGCTGCGCTAAGCAGagacagcagcagcagcaacaggaCCTGAACGATCAAGTAGAGGATCTGTCGGTGAGTCGCAAATCCGACGTTCCGGTGATAGTACCGCCGTCCACTACATCGGCCGCGATTAAAGACGCGCAGGAAGCAGGGCTTGATAGTAGCGACCGCTGCGACTACAGCTAA
Protein Sequence: MTASQQYCLRWNNHRSNLLTVFGELLHNEAFTDVTLAVESGRTLKCHKIVLAACSTYFQNLFHGLQHQHPIIILKDVGFPELEAILEYMYRGEVNVAQNQLPDLLKIAQVLKVKGLVEEHGNQSGTARDLRREDTMDPSISPPPAISTSTGGSGGSYSSPPHSTGGYSALYGKSAVPLDRAQSHLAGSLPITWPLPFHSGAGHQLPTSLSSSSVLAGGGGGYDNGIETSPLKRRKLMQSSTLVMNSDTRDPRDPRDLRDTPILRTVLGQAHADSSQAMPLLQPDSHESVHYRNASSNGSANDSDNRRSNDLAHCETAHADVSYMDEDERQPSPQSYGGDTVRNTGSDSTSNIMSGIAAADFVMLYAVCCQYLQTIRQTTNLPFTSCAQSSSEDHSVRRTTNVITEDEGAAADGAGVPQKPEWKRYKQYTRDDITSAIDAVKMGMSAVAAARKYGVPSRTLYDKVKKLGIPTSRPFKRSASNGGSTACFPYGIGANANGALYDNNRASVNALSENENESTSSNINIGESLAGTSTTVLETTFETTYAKATKDTSQDRDSMSDSMARCSVSPVIRCAKQRQQQQQQDLNDQVEDLSVSRKSDVPVIVPPSTTSAAIKDAQEAGLDSSDRCDYS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00765468;
90% Identity: iTF_00765468;
80% Identity: iTF_00885259;