Lace020015.1
Basic Information
- Insect
- Leptothorax acervorum
- Gene Symbol
- ZFHX3
- Assembly
- GCA_035220615.1
- Location
- JASTWQ010000190.1:359606-365077[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 4e-07 0.00041 21.4 0.0 2 44 372 413 371 414 0.91 2 3 3.9e-08 4e-05 24.7 0.0 2 44 441 482 440 483 0.91 3 3 1.9e-06 0.0019 19.3 0.0 2 37 510 545 509 552 0.90
Sequence Information
- Coding Sequence
- atgacaaatttaaatttccaGGATTTTTCCAGGATTTCTAGGTCTGAGGCAACCCTGACTGACAGTGTAAGTCATTTGCATAAGTTGAAACGAGCAATGCGAGAGCAAGGTAACAACAACCCATTGATCTCGATGGTACCGCCTGATAGCCCTACTGAATCGCCCGATTCCCAGCAAGATCAAAACAAGAAATCGTACAAATGCAACATCTGTAAGGTCGCTTTCAGCCAAGGCAGTACTTATTATATCCATATAACAACTGTTCATAAAACGCGTGCCAGTCACTTGCAGGATCTTGCAACCAGTGGTCAATTAGATCTCGATCGACCATTAATTGAACCACCACCGCTGAGTCCGAATAGTCCACCTACGACACCAGGGCCGCAACAACACATGCAATCAGCTACGCAACATTCAACGCAGACCACGCAAAATATAAGTGTCAAGTGCGAGTACGAAAAGAAAAGTGTCGTGGTGACCGTTGCGACGTCTTCGTCAACCAACACAGCGCCGAGAAGTTTCACGCCTGCCGCCGGACAACCTCAAGATCTCAGTTCTAACAAAGAATCTTGcaaaaaggagaagaaagaaaatactcagaacaaaaaatatattagccGAATGCCGGAAGCTACATCTACCGCTACAGCGACCACTTCGGCGTTGAGCTACACACCGATTTCGAGTACAGATTCCACAACGCCGACTGCGCTATTTACTAATCTGCATCATATTCCACACCAgtcgcaacagcagcagcaacagcaaaaACAATTACAGCAaaaacaacagcagcagcagcagcaacaagaACAGCAGCAAGCCCAAATCTCATTCGCTCAACGGATGCAATTACAGCAGCAGTTACAACAATATCAACGATTGATGATGGGAATGAAGGGATTAAACCTGCCCGCTTTAGCTGCCATGAATCTTCAAACGCCTCTAGTGCCAATGATGAGGAGGTCACCATCGTATGATGGTGCATCTACTGCATATCCACCGATTAATCAAGCAGATCTTCTTGCCCAACAGCATCTTGCCCTTCAACAGCAGCGAGCAGCGGAAATGAATATGTCTAATAAAAAAGGCAAACAGCGCAAAAATTATTCTCAAGAGCAATTGGAAAACGCTATGGATGCCATTAAATCTGGTTGTACCAAAAAGAATGCGAGCAAATTATATGGTATACCAAAAAGGACACTTTTTCGTAAATACAAAGAAAAAGTACCATTACAAACAAGTGTTGGTCCACCTACAATTCAATCACATAAAGAAAATATGTCTAATAAAAAAGGCAAACAGCTCAAAAATTATTCTCAAGAGCAATTGGAAAACGCTTTGGATGCCATTAAATCTGGTTGTACCAAAAAGAATGCGAGCAAATTATATGGTATACCAAAAAGGACACTTTTTCGTAAATACAAAGAAAAAGTACCATTACAAACAAGTGTTGGTCCACCTACAATTCAATCACATGAAGAAAATATGTCTAATAAAAAAGGCAAACAGCGCAAAAATTATTCTCAAGAGCAATTGGAAATGGCTTTGGATGCCGTTAAATCTGGTCGTGCACTAAGGAGTGCAAGCAGATTATATGATATACCATTAGCGACACTTCATGGTAAATGCAAAGGAAAAGTACCATTACAAACAAGTGTTAGTCCACCTACAATTCTATCACATAAAGAAGCGAATGCAGCTGCATCGCAGAAACCAGAGCGTACGCGCTTTACTGATGAACAACTAATTACACCAGGGCCGCAACAACACATGCAGGCAACTACGCAACATTCAACGCAGACCACACAGGATATTCTATCCCAGCTACGGCACTTGACCTCACAAAATACCCAGAACAAAAACTGTATTATCCGAACGGCGGAAGCCACCTCTATCACTCCAGCGACCACTCCGGCGTTGAGCAACACATCGGTTTCGTGTACAGATTCCACGACGCCGATTGCGCTATCCACTAATCTGCATCATATTCCACAACAgtcgcaacagcagcagcaaaaAAAActacagcaacaacaacagcaggaGCAGCAGATGCAACAACATTAA
- Protein Sequence
- MTNLNFQDFSRISRSEATLTDSVSHLHKLKRAMREQGNNNPLISMVPPDSPTESPDSQQDQNKKSYKCNICKVAFSQGSTYYIHITTVHKTRASHLQDLATSGQLDLDRPLIEPPPLSPNSPPTTPGPQQHMQSATQHSTQTTQNISVKCEYEKKSVVVTVATSSSTNTAPRSFTPAAGQPQDLSSNKESCKKEKKENTQNKKYISRMPEATSTATATTSALSYTPISSTDSTTPTALFTNLHHIPHQSQQQQQQQKQLQQKQQQQQQQQEQQQAQISFAQRMQLQQQLQQYQRLMMGMKGLNLPALAAMNLQTPLVPMMRRSPSYDGASTAYPPINQADLLAQQHLALQQQRAAEMNMSNKKGKQRKNYSQEQLENAMDAIKSGCTKKNASKLYGIPKRTLFRKYKEKVPLQTSVGPPTIQSHKENMSNKKGKQLKNYSQEQLENALDAIKSGCTKKNASKLYGIPKRTLFRKYKEKVPLQTSVGPPTIQSHEENMSNKKGKQRKNYSQEQLEMALDAVKSGRALRSASRLYDIPLATLHGKCKGKVPLQTSVSPPTILSHKEANAAASQKPERTRFTDEQLITPGPQQHMQATTQHSTQTTQDILSQLRHLTSQNTQNKNCIIRTAEATSITPATTPALSNTSVSCTDSTTPIALSTNLHHIPQQSQQQQQKKLQQQQQQEQQMQQH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -