Lace036670.1
Basic Information
- Insect
- Leptothorax acervorum
- Gene Symbol
- kn
- Assembly
- GCA_035220615.1
- Location
- JASTWQ010000778.1:2839971-2853178[+]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 8.2e-40 1.3e-35 124.2 0.0 39 120 20 101 14 121 0.93
Sequence Information
- Coding Sequence
- ATGAGGCAGATACTGAAGGAGGAACCTGTGCCACGTGCTTGGCCGCAGCCCGCGCTCGCCGACAACGGAACGGTTGGCGTGGGCCGGGCACATTTCGAGAAACAACCGCCGAGTAATCTGAGGAAGAGCAATTTTTTCCATTTCGTAATCGCCCTTTACGATCGACATGGCCAACCGATCGAGATTGAGAGGACGTCGTTCATGGGCTTCGTCGAGAAGGATCAGGAGTCTGAAGGCCAAAAGACGAACAATGGTATTCAGTACAGTCTACATCTGCTCTATTCTAATGAGTCTCGAATCGATCTGTATTCGTGTGCCCAGGCAGTGGGGCACGTAATAGCCCCATCCGTAGCGATGATGACGGGCCATCGACATTCCACACGGACACCCGGTCTCTTAAGGTCGCTAAAAAGCCCAGGGACTTTCGAGGCCCGGGCGCAACAGAGACATATTTTACGTCGCTGGCCCAGGCATGGCAAAAAGGGTCCATCTTCCGTCTTGAAGAAGCGCACGAATGTGCGCGCATATACGGACGGGGCGCAAAGAGGGATGAGGAACGACGGGGAAAGAGAGCAGAAGAAGCAAACGTTTTGA
- Protein Sequence
- MRQILKEEPVPRAWPQPALADNGTVGVGRAHFEKQPPSNLRKSNFFHFVIALYDRHGQPIEIERTSFMGFVEKDQESEGQKTNNGIQYSLHLLYSNESRIDLYSCAQAVGHVIAPSVAMMTGHRHSTRTPGLLRSLKSPGTFEARAQQRHILRRWPRHGKKGPSSVLKKRTNVRAYTDGAQRGMRNDGEREQKKQTF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -