Lace011081.1
Basic Information
- Insect
- Leptothorax acervorum
- Gene Symbol
- JARID2
- Assembly
- GCA_035220615.1
- Location
- JASTWQ010000071.1:385396-391021[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.3 3.4e+04 -3.3 0.1 61 82 161 177 138 178 0.59 2 2 6.4e-23 2.6e-19 70.8 0.0 6 89 1355 1436 1351 1436 0.94
Sequence Information
- Coding Sequence
- ATGGTTTTGAGTCGCAACgataagagaaagaggaaggagGGAGACCTGGTGGACCTCATGGACCCACTTTCGGAATCTCCGAAAAGGACCAAAGTTCACGCACAAAGAAAATTTGCGCAGGGTGCAACCACAGTGTTCAATACATCGCCTATACCTGTCAAAGACAAGGAGAAAGTTAAACCTGCCACAATCACAGAATTAATAACCCACAAACGTCCAAATACGGAggattttttaacatttttatgctTTAGAgGAACATCTATTTTGCCACCCAGtttaaatttcttcaatatCGGCAACAAAAAAGAGAAACAGGGACCTAAGCCAGCTCGTACTTCTACAGAGAAGGCTTCCTCTACTAGTACTGTTACAGAGATTCAGAAGCAAGAAAATACATACCAGAAAAATGTGACAAAAGTAAAGCCTATTGTTTCGGATAAGAAAAAGGTGACTAATACATTACACAAAAGCATTACCAAGCTTAAGACAGCTACATCTACGGTCCAGGcgcttaaaaagaaatatcagGAGCAACGCCTTGCTAAGCAAAGaatcaaaaataaattcaaaaccACTTGCGTTATAAGGACAAGATCGTGTACAGAGAGATCTATGTTGAAGGCTGGTCTTCAGTTGGCTCCGCGAAAATTCTTACCTAGAATCAAGACGAAGAGACATGGCCTAAGAAGCGGTGCACTGCCAGATAAAACCAACAAACCTCTGTTAAAAACGAAAGTCGCGTTACCCAAACCAAAGAAGAAAGTCAATTTTAAACCGAAAAACAGCGATACATCGAATACAGATGTGTCATCCGAAGAGGAGAACGATGTCGAGGACGATGAAGAGGAAGAGTTACATGTAGATAAATCGACATCGCAGATAAAGCGCAATATACAAAAAGGAATCCAAAAAAAGATCTGCACTAGAAGTAAGTCAGAGATGAGGAGAGTTACAAGATCGTCCAGTAGCACTGTCTCCTCACAGAATCTCTCCAGGAGACCTACCAGAAAAACGAAGGAAGCAGCAGCTGTATATATGGAAATTCTTGGAAGGAAATTAGTGAGCCCAGATTTAGAAAATGACGATAACGTTTCAGTTGACAGCTTTCCCGAACTGCCAAACGCTCGTAGAATAGCGCAAACGGAGAACGAGCTTAAAGCCAAAGTGAAACAGAATAGTGCCAAGACTatcgttaaaactaaagattttAAAGTGAACTCCTTCAATAGCAATGCTAATAAGCGATTGGATAAAAGCAAAAACAAGTTGATTTTAAAGAGCAAACGTTTGATGAGGGTGCAGAAATATTGCGAAGAGGATAGTGACGAAGAATCTGAGAGCTCAATAGAAACGAGCAATACAAGACCCATTACCAGACAAAGTCTTGGAAAGATTGATAAACCGATTAGCAGGAGCCTTAGATCATCCTCTAAAAACATAACTGTACAAACAGAAGTACAAAGTAACACAAATAGCAAACCGAAGACCCAGGTTCAAAGTTGTGTGAAATCAGCTAGAGAAAAATTCGTGATAAAACGTAAACGCGAGCAAAATATATCTAAAACATCGTCGGATAAGATTAAGCAAAAAAGCCTTAAAAGTAATCAAAACGAGAAAGCGGAATCCGAAGAGGAAACGTTGGGAATGCTGCTCAgtaaaataaagaagaagaaagcaaatGACGAGGAGGAAAAAGGACAGATCCCTGGCAATGTAAACAATACGAAAGATGGAAAGGCAGCTCGCGGCAACGCGCAAAATGTGAAAGCAGATCTGTCGAAGGTATCGGATGATGAGGAATCTTTTCGTGGGTTTACTAAGAAGGCGATATCGAAAGTATTGAATTCGTGTCAGACGCATGCCAATGTTAATCTGCTAGTCACAGAGTCCGATGAAAAGCTGAATTTGCCCAAAACATTGGACGTATTGCAAGCAGCGGATCAAAACGTTACTTTACGGGAAAGTAAAGTAGAAACGTCACAGGTCAAATCCGGTTTTCCGGTCAAAAATTCGCTAAACGGTGAGTGCAGCGTATCTGCGCAAGATCAAAAATCGGTATTGGATTTGTCTGTAAAGACGCAAAGCTCGTTGTTGCCACCCATGGAACAGACGAAATGTAATCATGAAAACGAGGTTTCTTCTAATCTTATGCCGCTGTCTACTTTGCACACGAGAAAGGAACGAGTGAATATGTCGACCGAACAGATAGAAAAGTGGTTGAACGAAAGCTCGCTTGCTAAAGAAGAGAGCAAGCTGGAGATGGAAAATGTCTCTAGCTTTAGGTACGATTCTgcaaaagaaaagttaaaggcCGACGTCTCGCATCTGTCTATCTCGACGAAAATCCAACATTTGGTACGACCGGTCAACGTCACTCTTTCGAAATTATCGGATAAGACGAATTTGAAGGACCGTGCGGGGATACATGGCAGAAATGTGATACCGGTATCATCTGATATGCATAATACCAGAGTGAAGCAACAGAATGCGATTGTCGACAAGAGTAAGATTACTGCCGAGGCGAGGGAGATTGCCAAGAATAAAACTGAGAAGACGAACAAAGATACTTCTCTTGTTGAAGATACTAGCGATACTGTGTCCAAATCGGATCAAAACTCGGTGGATAGTTCTATAGAGAAAAAATCGCCGACGgagaagaaaatatttcaactGCGGAAGCCCTTTTTGCCCAAGGTTAAGGAACGTAAGACTGTAACACCGAATGCGAACGCGTTTTCGCCGGAGAACGAGAGCAGTGTTTACGCGTTTGAAAGCGATACCGAGGTTCCCGTTAGCACACCCTTCCGAAGGAAGGTCAGAGATGATGCAAAACGTTCGAATGCAGTAATGCAGTCCACAGCGGCTATAGTATCCGAGACTAAAGTGATTGTCGAAGCCAAGAAATCGAGTTTGAAGGAGGATTCCGAATCGTCAGATAGCAAGGAGAAACCGTCGAGTGATCCCGTGACGTCTATAAGGAAAGAAGACAGGAAGGAGACGCAAGGACCGATGAACGTGGCAAATACGGGTCTAAGCGTGAGCAAGTTTGAGTTGCCCAAGAATTTCGCGAGCCTGACCAGTGTCCAAGTACTACCGCTTGACAAGCTCACGACGAGTTGGAGCAACGTAAACTGCAGCGCTTCCATAGCGGTGCAGGTGAATCTCGACGAGACCACGCAGGAGCAAGAAAGCGATGCGAGTCAACAGAAAAGTACCGAGATATCCACTCAGACCGAAATGAGTAACGAGAACGACGACGATAACGACGGGCAGCTGTTTTACATTCCGTTGCAGGCTGTTACGAGAAGCGGCCCGAATCTGGTGCAAGGTCAACAGCTAATACAGGGCGTCGCTGTTAAACTTGGCACGGAAGGACCGACCGGTCCTAATCAAAGAGTACTCCTTCGGGCTAAGTTGGTCACTAAGCAACCATTATCCGTGGCACGTTGTCCACCGGTAGGAACGGTACAACCGACAACACGTACCCCGCCCAATCCTATTACGGTGGAACAGCAAGTACCATCGACGTCAACGACCGAGACCGTGTCGACCACGATATCAAGTATGCCGAGTGCAGAGACGCAACCGACGTCACTAACGAAAAACGAAGTCTCGATGCCAAGCCCGAATCGTCCACATGTCAGTATGAGCGCAAATAGCAGTTTGGAGAAACTCATAAAGTCACCGAAGTCGTCTAGGGAAAGAAAAGCTTCTATTGATTCGACAAAAAGCGGGAAGAGGACACAAATCAAATGCAAACAAAAGGGATCAGAGATATGCTCTTCAAGCAACAGTACGACATTTCCAGGCACGAAGATCGCGAACGATGAAGCTCGTGTAGTCGAGGCGCCAACGTTTCATCCAACGGAGAAAGATTTCCAGGATCCATTGGAGTATATAGACAAGATAAGGCCAATCGCTGAAAAATTTGGAATATGTAGAGTGGTGCCTCCATCAAATTTTAAGccGGAATGCAAAGTGTCCGACGATATGAGATTTACCGCTTATAATCAGTATGTACATCGCATGCTCCACAGGTGGGGTCCTAATGTAAAAGAAATGATGGCTATCAAGAAATATTTAGCTACTCAGAGTATTACTTTGACTCAACCTCCATggATTGGTGGAATGGAAGTAGATTTACCTCACTTATATCAAACAGTTCAAAGCTTGGGTGGATTGAAAGAAgtaattgaaaaaaagaaatggcAGAAAGTAGCAGATGGCATGAAGATACCGAAATCGGCACAGGATCGTGTTACTAAATTAGAcgatatttattgtaaatatttactacCATATGATACATTATCGCcagagGAACGTGGGAAATTGTTCGACGAAGTTGAAACTGAATGGATGAGAAAAGAAAGCAAAGCCTTGCAAAGGCAAGAAGTGTCATCCAATGATAACGATGAGGAAGAGGATGAGGACAGTTCTGATGAAATTGAAGAATGCATTGTAAAAGTATGA
- Protein Sequence
- MVLSRNDKRKRKEGDLVDLMDPLSESPKRTKVHAQRKFAQGATTVFNTSPIPVKDKEKVKPATITELITHKRPNTEDFLTFLCFRGTSILPPSLNFFNIGNKKEKQGPKPARTSTEKASSTSTVTEIQKQENTYQKNVTKVKPIVSDKKKVTNTLHKSITKLKTATSTVQALKKKYQEQRLAKQRIKNKFKTTCVIRTRSCTERSMLKAGLQLAPRKFLPRIKTKRHGLRSGALPDKTNKPLLKTKVALPKPKKKVNFKPKNSDTSNTDVSSEEENDVEDDEEEELHVDKSTSQIKRNIQKGIQKKICTRSKSEMRRVTRSSSSTVSSQNLSRRPTRKTKEAAAVYMEILGRKLVSPDLENDDNVSVDSFPELPNARRIAQTENELKAKVKQNSAKTIVKTKDFKVNSFNSNANKRLDKSKNKLILKSKRLMRVQKYCEEDSDEESESSIETSNTRPITRQSLGKIDKPISRSLRSSSKNITVQTEVQSNTNSKPKTQVQSCVKSAREKFVIKRKREQNISKTSSDKIKQKSLKSNQNEKAESEEETLGMLLSKIKKKKANDEEEKGQIPGNVNNTKDGKAARGNAQNVKADLSKVSDDEESFRGFTKKAISKVLNSCQTHANVNLLVTESDEKLNLPKTLDVLQAADQNVTLRESKVETSQVKSGFPVKNSLNGECSVSAQDQKSVLDLSVKTQSSLLPPMEQTKCNHENEVSSNLMPLSTLHTRKERVNMSTEQIEKWLNESSLAKEESKLEMENVSSFRYDSAKEKLKADVSHLSISTKIQHLVRPVNVTLSKLSDKTNLKDRAGIHGRNVIPVSSDMHNTRVKQQNAIVDKSKITAEAREIAKNKTEKTNKDTSLVEDTSDTVSKSDQNSVDSSIEKKSPTEKKIFQLRKPFLPKVKERKTVTPNANAFSPENESSVYAFESDTEVPVSTPFRRKVRDDAKRSNAVMQSTAAIVSETKVIVEAKKSSLKEDSESSDSKEKPSSDPVTSIRKEDRKETQGPMNVANTGLSVSKFELPKNFASLTSVQVLPLDKLTTSWSNVNCSASIAVQVNLDETTQEQESDASQQKSTEISTQTEMSNENDDDNDGQLFYIPLQAVTRSGPNLVQGQQLIQGVAVKLGTEGPTGPNQRVLLRAKLVTKQPLSVARCPPVGTVQPTTRTPPNPITVEQQVPSTSTTETVSTTISSMPSAETQPTSLTKNEVSMPSPNRPHVSMSANSSLEKLIKSPKSSRERKASIDSTKSGKRTQIKCKQKGSEICSSSNSTTFPGTKIANDEARVVEAPTFHPTEKDFQDPLEYIDKIRPIAEKFGICRVVPPSNFKPECKVSDDMRFTAYNQYVHRMLHRWGPNVKEMMAIKKYLATQSITLTQPPWIGGMEVDLPHLYQTVQSLGGLKEVIEKKKWQKVADGMKIPKSAQDRVTKLDDIYCKYLLPYDTLSPEERGKLFDEVETEWMRKESKALQRQEVSSNDNDEEEDEDSSDEIEECIVKV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01354407;
- 90% Identity
- iTF_00765325;
- 80% Identity
- -