Lace021241.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Leptothorax acervorum
Gene Symbol
Arid4b
Assembly
GCA_035220615.1
Location
JASTWQ010000214.1:1-5200[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.8e-27 7.5e-24 85.3 0.1 1 89 249 336 249 336 0.95

Sequence Information

Coding Sequence
GGAGACGATCCACCATCCCTATCGGTGGGTACAGAAGTTAGCGCTAAATACAAGGGTGCCTTCTGCGAAGCAAAATCCGTAAGGTGTCAATATACTGTAGTCTTCGATGATGGAGATATTACAACGTTGAGAAGAACCGCGCTTTGTCTGAAAAGTGGACGGCACTTTGCAGAAAGTGAAACGTTGGATCAACTTCCGTTGACTCATCCAGAGCATTTTGGGAACCCTGTAATTGGAGGTAGAAGGGGTAGACGATCAAGGCAAGCACAGGATGAAAGCAGTGAAGATGAGGACAGTCCACCACGAGGCGCTCGTGACTCGGCTTCCAGCGGAGGTGCGAAGGAAGGAATGGAAACTGAGCCAGAAATTGGTAGAGTGGTTTGTGTGGAACTCggtgataaaaagaagaaagacaATTGGTTTCCAGGATTAGTGGTTGCACCTACCGCTCAAGATACAGTAAGAATACGAGTGAGAGACGATTACTTAGTACGCTCGTTTAAAGATGCGAGATAttATACAGTACCCAAGAAGGAAGCTACAGAATTCACGAAAGAATTAGTTAATAAAGTTGAAAACAGTACTTTGAAGGTCGCAGTGGAGAAAGCGCttttatttttagagaaaaatgaaTTGCCACCCCATTGGGACAGGGATTCCCTGTTTGGGCATTCCGTTTCTAGTGGAAATAGCGATTATGATGGAGAACTTGACTCAGatAGTTCGGACGACGAACCGCGTGAAGAAAAAGATCATTTTGTGGCTCAATTGTATAAATTCATGGATGATCGCGGGACACCTATAAATGTTTGTCCGATGATTGGAACTGAGGATATAGACTTGTATCGGCTTTTCCGAGCGGTCTACAAATTGGGTGGTTACAATCGTGTTACGAATCAGAATCAATGGAAAGCCGTAACACGGCGACTTGGTTTTACGATGCAAAATTCGGTATCTTTGTACAATCTTGTGAAGCAGGCTTATAAGAAGGTCTTACACTCCTTTGaagatttttatagaaaattaggCTGCACCATGGTAAATCATCCACGAGGTAGCATGCGTAAACAACGTCCTGGAAGAAGTCTGATCCGCGACAAAGACAGAAATACTCCTATACCACCGCCAGCACCAGCGCAAGTGAAAAGTGACAAGGATGAAGATGAGAAGAAAGTTGTGGAGGatgagaagaaagagaagaaggagaTTAAGAAGGAAcaaataaaagaagaagaagttgtcaagataaaaaagaaagaagaatctGAGGGAAACGGTAGCGGCCAGGAGAGCGATGTAAATGTGGAAGGAGATATCGAATCGTCTAATAATGAAAAATCACAAAAACCGACCACGCAAATTTCTACGTTATCTCCCACTTCGTGCAGTACTACAACTGCATCTTCCAGCCGGGCCAAATCAAAAAGTAAAGAAGATATCAAAAAGAAGGTGattgaaaagaagaaaacaGAGACCAAGAAGCAAGAAAAGAAGGATGAGAAGATCAAGGAAGAAGAAGCCACTAAGACAAGATCTAAGGCAAAAGATGATACTGTGAAAAATAAAGGTGCTTCCGAAGGAAGAGAAACTCGGACACCATCTAGAGAGGCAGACAAGAAAACGATGTCTAAGCAACGACGTTTAACGGATGAAGAATTAAAGAAACGAGGAAGGAAGCGCAAGGAATACGAAACGGAAAAATCGCGTGCGGACGAACAACTTACAGAGATTGCCCCTAGCTACAAAGGTCCCGTCGAGTGTGGTGacaaattaaaagtatattatgGCCCAACGCACGAATCCAAAGTTACTTATGAAGCAAAAGTCATCGAGATAGAGAAGGAAGGTCCAGAACCAATGTACCTTGTACATTATACAGGTTGGAACACCAGATATGACGAGTGGATTAAAGCGTCTAGAATCGCTCAAAATATCACGCAAGCTCAAGGTAGAATAAAGCGCGTCAAAGCAACTCCCAGGCCTCAAACTCCCAGCACGAATTCGTCCAACAACGTCAAGTTAAAAGGTAATTGCAATTCGAGCGCTAATGCATCGCAAAGCCGACGCCGGGCGCAAAGCGTCGCTCCTACTTCTAGCACCGGTCAGTCAGCTTCAACATCTATGAAAGAAGCcaagaaggaagaaaaggagaaagacaAGGAAACAATACAACCAACTAGATCCACTACACCGCTATCTATCGCTAGTTCTAGTTCCAGAACTAAGAGTCCTGCTACGCCCGCCAATAGGCCGACCAGAACAACAAGAAATGCAGAGTTATCTGGAATAGAGCATCGTAGGCGCACCAGAAGAACCTCGGGACACACGGACATATCTGTTGCATCAGAAAGTGAGGATAGTGAGGGTTACGAGTCCGATACCACCGAGCCCGAGCAAACCAAAACCAGATTGAGAGGTATGGAAGAAAGAAAACGGAAGGAAGCGCGAAGTAGAGCAGAAGAGAGAATTAGAACGGATGATGTGACGAGTGATGGTGATGACGATAAAGACAACTTGGATGAACCACGTAAATGTAGGCGTTTAAGAAGAACCCCTGGCAAATCTCAAGGCATTAAATCCGAACCGGATAGCGATCAAGAGGAACAACCAAAGGGCCGAGATTTCGATCTTAATCAAATACGATCTGAATTGAAAGGTTTCGACAAAGCTGTCAAGTTAGAGATAGTCAGGGCGGAGCCTGAAGACGAAGTTAAGCTGGACGAGAAGGAAAACGTGGCCGCGGTCACGGCGTCGCCCAAGTTGGAGAAAACTATCGAGTCTCCGAAGGTGGAAGTTGTCGAAAACGAAAGTGGAAAGCACAGAAGACATATATGA
Protein Sequence
GDDPPSLSVGTEVSAKYKGAFCEAKSVRCQYTVVFDDGDITTLRRTALCLKSGRHFAESETLDQLPLTHPEHFGNPVIGGRRGRRSRQAQDESSEDEDSPPRGARDSASSGGAKEGMETEPEIGRVVCVELGDKKKKDNWFPGLVVAPTAQDTVRIRVRDDYLVRSFKDARYYTVPKKEATEFTKELVNKVENSTLKVAVEKALLFLEKNELPPHWDRDSLFGHSVSSGNSDYDGELDSDSSDDEPREEKDHFVAQLYKFMDDRGTPINVCPMIGTEDIDLYRLFRAVYKLGGYNRVTNQNQWKAVTRRLGFTMQNSVSLYNLVKQAYKKVLHSFEDFYRKLGCTMVNHPRGSMRKQRPGRSLIRDKDRNTPIPPPAPAQVKSDKDEDEKKVVEDEKKEKKEIKKEQIKEEEVVKIKKKEESEGNGSGQESDVNVEGDIESSNNEKSQKPTTQISTLSPTSCSTTTASSSRAKSKSKEDIKKKVIEKKKTETKKQEKKDEKIKEEEATKTRSKAKDDTVKNKGASEGRETRTPSREADKKTMSKQRRLTDEELKKRGRKRKEYETEKSRADEQLTEIAPSYKGPVECGDKLKVYYGPTHESKVTYEAKVIEIEKEGPEPMYLVHYTGWNTRYDEWIKASRIAQNITQAQGRIKRVKATPRPQTPSTNSSNNVKLKGNCNSSANASQSRRRAQSVAPTSSTGQSASTSMKEAKKEEKEKDKETIQPTRSTTPLSIASSSSRTKSPATPANRPTRTTRNAELSGIEHRRRTRRTSGHTDISVASESEDSEGYESDTTEPEQTKTRLRGMEERKRKEARSRAEERIRTDDVTSDGDDDKDNLDEPRKCRRLRRTPGKSQGIKSEPDSDQEEQPKGRDFDLNQIRSELKGFDKAVKLEIVRAEPEDEVKLDEKENVAAVTASPKLEKTIESPKVEVVENESGKHRRHI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-