Lace000199.1
Basic Information
- Insect
- Leptothorax acervorum
- Gene Symbol
- -
- Assembly
- GCA_035220615.1
- Location
- JASTWQ010000001.1:1846894-1850397[-]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.11 2.3e+02 3.3 1.5 7 25 384 402 382 408 0.88 2 2 3.2e-08 6.5e-05 24.3 11.7 5 62 433 490 430 492 0.93
Sequence Information
- Coding Sequence
- ATGACGTCGTCCACGACGGTATATGCGTACCATACTCCCAACACCCTCTATCCGGCCCAAGTGGAAGGTACACCGATACCGATCGTCTCAGGGAGGGTTTTCAAAATCCCTCCCATCTACGAACGTCCAACAACCAGCAACATTTCAATTGAGGAAGGAGGTGTTCTTAACGTACCAAAATCATGCAACCGTCAGCAGCTTCCGTTATCTGTTACTCGTGGCGTGAGATCGCGGCCACTGGGAGATGCCACCTCGACGAAGGTGGAGACAGTTCCTTTGCTAAGCCCGACGATGGAGACCGAGCTTTTGAAGGAGCCCTGGGTATTCCCGCGCACAAAGGCGAATCCAACGAAAGAAGAGGATATCGCGGCACTCTCCGCCTGGGAAGAGGACTTTCAGGATCTGAGCAGTTGGTGCATGGACACGTTCCAGGGTCAATGCGATTTTCATATAGGTGAATCGACTACGTTTAAACTATCAGGTACAAAATACGAGGGTAACGGCGTTTCGATTGCGGAAAAGGGAGGGTTGTTAAAGGATTTGACGAGAACGACTGATGATGAGAAGTTGGATTTGAAAATGAATACCGTTAAGACGACCAAAGAGTCAAGTAATAATCGTGACTTGCTGCTATCTCCATCGGGACTCGTTAACGAATACGGATtaggaaataataataaagaggAGAACAATGCATCCAGCTCGTGGTTAATGTCACCTGAATCTACAGCTTCTAAAAGCACCTCGTCGAGCAAACAGCATAACGCAGATATTAGCGCGCCACTCCAATCCGAAAGTCATGATTTGGATTACGCTTCCCCGACATCGTTTAATACTACCACGAATCAGCGTGAAATGTGGGATGAGCTACGCACGATCGAGACAACTGGATCGGATACTTTCGATTTACTGTCGTACCTTTGGGAAGATGAAATGCGTTCACTGGAAGGCAAGGAATCTACCGAATCCTCGACGATATTGAAAGTCAGACCACTCGCAACGTCGTCACCGGTACTTTCATTTACCTCCACAAAGGTAAAGACGGAGGAGATCAACGAGCCGACGCCACCCTCGACGCGTCGAAGGATGGAAACCCGCGCGACATCGACGATAACTTCTTCCACGGTGAAGACTCCCGCAGCGTCGTCTCGAAGATCGGAGAGAACGAGGATAGCGGCGACTAAAagcaaagaaagagaaagagtcaCTGTCACCAGTGCAAAGACGAAAGATAAGAATGGAAGGAAAAGATATTACGAAGAGAGTGATTCCGATGACGACGTCGCTCTCTCCCAATATAGGGAATGCCGTGAGAAGAACAACGAGGCTTCGCGAAGATCACGGATGAACAAGAAAGTCAAGGAATCAGAAATGGCCAGTAGGGCGACCGAGCTGGAGAGGGACAACAAGATACTGAAGATGAAGGTCGAGGAGTTGGAAAAGCTGGTGACGTCGATGCGCAACGCGTTATTACGATCTGCTTTAAAGAAGGAATTTTAA
- Protein Sequence
- MTSSTTVYAYHTPNTLYPAQVEGTPIPIVSGRVFKIPPIYERPTTSNISIEEGGVLNVPKSCNRQQLPLSVTRGVRSRPLGDATSTKVETVPLLSPTMETELLKEPWVFPRTKANPTKEEDIAALSAWEEDFQDLSSWCMDTFQGQCDFHIGESTTFKLSGTKYEGNGVSIAEKGGLLKDLTRTTDDEKLDLKMNTVKTTKESSNNRDLLLSPSGLVNEYGLGNNNKEENNASSSWLMSPESTASKSTSSSKQHNADISAPLQSESHDLDYASPTSFNTTTNQREMWDELRTIETTGSDTFDLLSYLWEDEMRSLEGKESTESSTILKVRPLATSSPVLSFTSTKVKTEEINEPTPPSTRRRMETRATSTITSSTVKTPAASSRRSERTRIAATKSKERERVTVTSAKTKDKNGRKRYYEESDSDDDVALSQYRECREKNNEASRRSRMNKKVKESEMASRATELERDNKILKMKVEELEKLVTSMRNALLRSALKKEF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00765300;
- 90% Identity
- iTF_01406265;
- 80% Identity
- -