Ldol065775.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Leptopterna dolabrata
Gene Symbol
nfxl1
Assembly
GCA_954871275.1
Location
OX940986.1:6521990-6529164[+]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 20 1.5 6.1e+04 -3.7 3.2 14 19 99 104 99 104 0.87
2 20 0.058 2.3e+03 0.8 0.5 4 10 135 141 134 141 0.96
3 20 7.7e-08 0.0031 19.6 16.7 1 19 149 166 149 166 0.99
4 20 2.3e-07 0.0094 18.0 14.6 1 19 202 220 201 220 0.94
5 20 0.27 1.1e+04 -1.3 1.8 5 10 244 249 244 249 0.95
6 20 5.8e-10 2.4e-05 26.4 14.2 1 19 255 273 255 273 0.99
7 20 7e-08 0.0028 19.7 11.5 1 18 308 325 308 326 0.97
8 20 0.12 4.9e+03 -0.2 0.2 1 5 335 339 335 341 0.95
9 20 3.4e-06 0.14 14.3 15.6 1 18 360 377 360 378 0.97
10 20 2.6e-10 1e-05 27.5 13.6 1 18 387 404 387 405 0.97
11 20 0.58 2.4e+04 -2.4 2.6 5 10 433 438 423 438 0.48
12 20 0.00016 6.4 9.0 9.0 9 19 453 463 451 463 0.90
13 20 0.0011 43 6.4 5.9 1 12 472 482 472 482 0.96
14 20 1.7 6.8e+04 -3.9 2.6 14 18 511 515 511 516 0.88
15 20 1.9 7.8e+04 -4.1 0.4 9 11 533 535 533 536 0.73
16 20 0.00021 8.4 8.6 4.7 1 12 552 563 552 563 0.97
17 20 0.007 2.8e+02 3.7 18.2 1 19 590 607 590 607 0.93
18 20 2 8.1e+04 -6.7 3.1 10 13 614 617 613 617 0.68
19 20 1.7e-07 0.0068 18.5 10.3 1 16 654 668 654 674 0.89
20 20 0.38 1.5e+04 -1.8 0.1 8 11 690 693 689 697 0.71

Sequence Information

Coding Sequence
ATGGAACTCGTGGAAGCAcgaaATTCCGTCGTAAGGAACTACTCACAACTAGGAGGCAAAAATGAAGATCTtggaaaaactcaaaatttcctCGACAACGTCTTTCGTTCTGATGTCGCCATTTGTTTGATCTGCATTGGGACTATTAAAAGACCTGAATCTATATGGAGCTGTTGCTCGTGTTACGGTTTCTTCCATCTGCTTTGCATACAAAGATGGGGCAAAGACAGTATTGCCCATCAGAAGCTGGCGGAGGATGAGCGGATGGCCACGTCCAAAAAGGAGTATTTCTGGCCATGCCCCAAATGCCGGGAAAACTATTCTCCGGAAAGCATTCCTCAGCGTTACGAGTGTTTCTGCAGGCAAGTCATAGATCCCCCGTTCCAGCCTTGGCTTGTTCCACATTCCTGTGGCCAAGTATGTGGAAAAAACTTGGTGCCCAGCTGCGGTCACTCGTGTCTCCTGCTCTGCCATCCAGGTCCTTGTCCGCCGTGCCCTAAAATGGTCCAGACCAAATGCTACTGTTCGAATGGAGGCGACAAGGTGGTGAGGTGCTGCTACAAAGAGTGGTCTTGTGGAAAGAAGTGCAGTAAGCTCCTCACCTGTCAGAAGCACAAGTGTGAAACGGTTTGCCACCCCGGGGAGTGCCCAGCTTGCCCAAAAACATCAATGATGACCTGTGATTGTAAAAGCCAATCACGTCTCACTCCTTGTGCTGAGCTATCTTGGAAATGCGAGAAGGTGTGCAACAAGTTGTTGGACTGCGGCAAGCACAGATGCGATCTTGTCTGTCACAAAGGGGATTGTGGACCATGTCCTCGTACCCTGCCCAGGCCGTGTCCGTGTGGCGAAGAAGAGACCGTCCTCCCTTGTACCCAGGAGGTCCCCACCTGTGGCAACACATGCGGCAAACTGTTGGACTGCAGCCTCCACACGTGCAACCAGCGGTGCCACCGAGGTCCCTGCGGCGCCTGCATGGAGTTCCTGGAGAAGTCCTGCCGCTGCGGCATTCACAAGAAAGAAATAGCTTGCATCAAAGAGTACCTATGTGACACCAAGTGCAAAGGGACTCGAGATTGTGGCTTTCATCCATGCAATAGAAAATGTTGTGATGGCCGGTGTCCTCCTTGTGAGAAACTCTGTGGCAAAACCCTCCGGTGTGGTCAGCACAAATGTTCCTCTGTCTGCCATCGCGGGCCCTGCTACCCTTGCGAACAGACCAAGCAGCTATCCTGTAGATGTGGATCAACCGTCATAACAGTCCCATGCGGAACACATCGGAAAAAGAAGAACTTGAAGTGCAATAAGCTGTGCATGATTCCCCCTGAATGCCACCATCCTAAAAGGGAAAGCCACAAATGCCACATGGGCCCCTGTCCACCGTGCCAACAGGTTTGTGGCAAACCACGGGATTGCGGACACTCCTGTCCTCTGCCCTGCCACTCCTCTGTACTCGTCAATTCAATTCGTAATTACAAGCCAGCGACGCCCTGGGACAGAGTTTCTGCACCTGTGGAAATCAAAGAACTTCCCTGCCCTAAGTGTGTGGTGCCAGTCGGCGTCTGGTGTCCCGGTGGTCATGAAGAGATGTTCTTACCCTGTCACCGTGCCGTGACCCAGCAGTGTGGGAGGAACTGCGGCAGGATTCTTGCCTGCTCAAACCACGAGTGTGATCTACCTTGTCATAAAGTTACTGGGGCTCCTGATGAAACGAGCGCTGGAAAGGAGTGTATGGACTGCACCGAAGACTGCGAAGCTCCCCGACTCTGCTCGCACGAGTGTCCACAGTCGTGCCATCCGCCGCCCTGCCCGGAGTGTACCGTGATGCTCAAACTCAAATGCCACTGTGGAATCACATTCACTTATGTGAAATGCTGCGAATGGACTTCACCATCTTTGGACGACGAGATGCGTAGAGACATGCAGTCCTGTAAAAACCAGTGCCCGAAGAATTATCCTTGCGGTCATCGTTGCACGGACATCTGCCACGAGGGAGACTGCCCGGGAGCTGCCATGTGCCGGAAGAAGGTCAAGATGACCTGCAACTGCAAACGAATCAAGAAAGAGGTCGTGTGCCACGTCTCGGGCGAAGTGGCTCCCGTGTGTGACGACGTTTGCAAATCCACCAAAGCCCAAATCAACGAGAAAGAACAGAAGGAGAAAGAAAAGCAACGCCTTCTCGAGGAACAGCGCAATAAAGAAGAATTGGAAAAGTACGAAAAGAAGCTACAAGGAGCGAAAAGACATCGCAAGAAAAGGACCCTAAACGAAGAAGAAACTAAAGGATTTTTCTCTGTAAAATTCTTCGTCATCACCGGCGTCGTTCTAATTGTATCGATTGGGgcgtattttattattaaatag
Protein Sequence
MELVEARNSVVRNYSQLGGKNEDLGKTQNFLDNVFRSDVAICLICIGTIKRPESIWSCCSCYGFFHLLCIQRWGKDSIAHQKLAEDERMATSKKEYFWPCPKCRENYSPESIPQRYECFCRQVIDPPFQPWLVPHSCGQVCGKNLVPSCGHSCLLLCHPGPCPPCPKMVQTKCYCSNGGDKVVRCCYKEWSCGKKCSKLLTCQKHKCETVCHPGECPACPKTSMMTCDCKSQSRLTPCAELSWKCEKVCNKLLDCGKHRCDLVCHKGDCGPCPRTLPRPCPCGEEETVLPCTQEVPTCGNTCGKLLDCSLHTCNQRCHRGPCGACMEFLEKSCRCGIHKKEIACIKEYLCDTKCKGTRDCGFHPCNRKCCDGRCPPCEKLCGKTLRCGQHKCSSVCHRGPCYPCEQTKQLSCRCGSTVITVPCGTHRKKKNLKCNKLCMIPPECHHPKRESHKCHMGPCPPCQQVCGKPRDCGHSCPLPCHSSVLVNSIRNYKPATPWDRVSAPVEIKELPCPKCVVPVGVWCPGGHEEMFLPCHRAVTQQCGRNCGRILACSNHECDLPCHKVTGAPDETSAGKECMDCTEDCEAPRLCSHECPQSCHPPPCPECTVMLKLKCHCGITFTYVKCCEWTSPSLDDEMRRDMQSCKNQCPKNYPCGHRCTDICHEGDCPGAAMCRKKVKMTCNCKRIKKEVVCHVSGEVAPVCDDVCKSTKAQINEKEQKEKEKQRLLEEQRNKEELEKYEKKLQGAKRHRKKRTLNEEETKGFFSVKFFVITGVVLIVSIGAYFIIK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00146088;
90% Identity
-
80% Identity
-