Basic Information

Insect: Leptopterna dolabrata
Gene Symbol: -
Assembly: GCA_954871275.1
Location: OX940976.1:66926461-66937197[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 1.7e-08 4.6e-06 28.3 0.0 4 38 898 931 895 935 0.87

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	1.7e-08	4.6e-06	28.3	0.0	4	38	898	931	895	935	0.87

Sequence Information

Coding Sequence: ATGTTAGAGTCCATCAGGTCAAAGATATCTATGACAACTACAGCAGCTTTGCAAAAGAGAAGTGAACCAGCTGCGGACCGGCAACAGAAAACCCATTCACTACAGGAAAGCCACTCCCCCAAGTCGGGTGGGGCACAGCCCAGAAGAGTGAGCTGGAAAAACTGCTCTATTTGTGAAGAGGATGGCCACCCTGCTCGTCAGTGTCCCTACAAACTGGGAAACCACATGCAGAGCTTGTGGCTAGAATTTATCAATCGCCCCGAACTTTGTGACAAGAGCCCGTCTTTCATAAGAAACACCGTGAGAGTCTGCTCGATTCATTTTCACCGGCTTGATTTCCGCACTTTTTCTTCTTCCTTCTCTATTCTCCAACCCTTTGCATATCCTTCTGTTAGACGTTTGGCCAATGAACCTCCTTTCGATCCTCAACTCGATTTCCTCCGTTCCCATCCAACTCCAACCACAACTTCCCCTTTATCCAAGCCGTCTCCATTGTCCAGCCTTTCTCCTCGATCTCCTCATGTTCGAGCTCCCGTTTTACGGCAATATACACGGAAGAAACTTGTTAAGACAGACAAAAGCTCCGGTGACACGAGAGATTCTTCATTCGTATCTACAGCGGAAGATGAGGGAAAACATGGTTCCAGCCTAGGAATGCTAGTGACTCCGTCTACTGCTGAAGCAAATTTCTCATCACAAAACATCCCGTCGGCGCAGGAGGGAAAAACGAAAGAGACACGGCTCAAGAGGCAGTTGATCGAGGCCAAAAAGAAGTGCCACCGATTGGAAGTTCGGCTTCGTAGAACGAGAAGAGTGAGACCTACTACTGCAGGAGAGGTTGCAAAAGCTGCTTctaattttctgtctaaaacGGCACACAAGCTCTTCTGTGCCCAGTTGACAATGTTTGCAAAGAATAAGTATGGGAGGAGGTGGACTGGAGAGATGAAGGATTTCGCCCTAAGCTTGTATTTTCATTCCCCCCGGTCGTATAGATTCCTCCGAAAAATTCTATTTTTGCCCAGCAAAACCACACTCAAAAGGTTTCAAGCCAGAATCCCACTGAACACTGGGGTACATAATCATATTATTGACTTCTTGAAGGACGAAGTCCAGAAGTGGcctgacaaaaaaaaattatgtacccTAGTGTTCGATGAAGtgtctattaaaaaaaatctacaTTATGAACCCCAACATGACACTATTGTAGGGCTTGTCGATAAGGGTTTCTCCCGGAAACCTGTAGTAGCTGACCAGGCGTTAGTTGCTATGGTCAAAGGTACAGTGACTTCGTGGAAACAAGTTGTTGGCCACTGGTTTACAGCCAGTGGAGAACCTGCAACTTGTATCTACGAAGCATTGTACCAATGCCTGGAGCAACTAACGTCTGTTGGGCTTGTTGTAAAAATGATCATATGCGACCAGGGGGCAAAGAATAGATGCGTGTCAAAGCAAATGGGGATCACACCCGAGAAACCATATTTTAtgtataaaaatgaaatggtattcTTCATGTGGGATTCCCCCCACCTCATCAAGTCAATGAGGAACAATTTAATGTGCTACAATTATAGATGGAAAAACGGAGTAGCGAAGTGGGATCACATCTTAACTGCCGTTAAATGTGATGACCCACTTCGGCTCCGTTTACTTCCAAAGGTAAATTTGAGGCATGTAGATTTCAAAAGAAATAGTTTCCGAAAAATGAAAGTGAAATTTGCAACTCAGGTGCTATCTCGGTCCATGAGCACAGCAATGTTGGTGTTACAAATAAAAGGCATTCTTCCTGCTGATTCCACCAATACTGCAGACTGTGTGCAGGATCTGAACGATCTCTTTGATTGCTTTAACAGCACCAAGCGTAGTGATAAGCTATCTTATCGCTATGCCTTTAGCTCCTCCTCACGCCATAGATTGTTTTTGCAAGACATGTTGAAACATTTGACAAGGTCGCAATTCCTTGATTGTCCGCGGCAACCGGACTGTTTGCGTGGTTGGATTCTGAATATCCGTTCATTACTCATGCTTAGTGAGCATATGTTGTCTAATTATGGAGTAGGTGAAATCAAGACTCGTTTATTGAATCAAGACGCTCTTGAAAACACTTTCTCCATAATTAGACGGCAGCATGGATGTTCAGACCATCCAACTGCCAAACAGTTCCAGAGCGGACTCAAGGCATTGTCCTTGTCATCAATGTCCAAGTTGCCGAGCTCAAGCAACTGTGAGGAGGAGGTAGAACGCGCTTTGGTCTGCGTAAGTAACTTGAAGAATTGTTCGGATCTAAGCAGTCGTGGTGATGGTGAGACTGAGCTGGAAGAATGCCAAGACAACATTGCTGAAACGCCGTTGGGGCCGGTTGAACAAAATGCCTTTTATTACTGTTCTGGTTTTATAATCAAACAGTTTTTCGCAAGACATAAGAATTGTGATAATTGCAAACGTCAGCTGCTTGTTCAGCCGAATGAAAGAGTGATGACACAAAATTACCAACTCTTTACCTACTTCAAAGCCTATAGTGAAGCGTTAGGTACAGAGTTTGGTAATTTGTGCATCCCGGCTGAACAAGCATTTGATGTTTTACAAAAAATGGAAGGCATTTTCTTCAGCCGGTTCCACGTCATTGCTCATAGGACCGGGATGCCACGAAGTAGTGAGGGGGTTAAACGTCCTCCCATTGACCCTGGCCCTTTGGAGGTAGCGATCACTGAAGTGAGGAATGGTAGCAGCATCAATAAAGCCGCCGAAGCTCATGGACTGTCGAGATCAACGCTTCAATCATATGTCAAGAAGATGCTGGGTGGTGAGACGCCGACTGTCGTGAACAATAACTGTGCACACTGA
Protein Sequence: MLESIRSKISMTTTAALQKRSEPAADRQQKTHSLQESHSPKSGGAQPRRVSWKNCSICEEDGHPARQCPYKLGNHMQSLWLEFINRPELCDKSPSFIRNTVRVCSIHFHRLDFRTFSSSFSILQPFAYPSVRRLANEPPFDPQLDFLRSHPTPTTTSPLSKPSPLSSLSPRSPHVRAPVLRQYTRKKLVKTDKSSGDTRDSSFVSTAEDEGKHGSSLGMLVTPSTAEANFSSQNIPSAQEGKTKETRLKRQLIEAKKKCHRLEVRLRRTRRVRPTTAGEVAKAASNFLSKTAHKLFCAQLTMFAKNKYGRRWTGEMKDFALSLYFHSPRSYRFLRKILFLPSKTTLKRFQARIPLNTGVHNHIIDFLKDEVQKWPDKKKLCTLVFDEVSIKKNLHYEPQHDTIVGLVDKGFSRKPVVADQALVAMVKGTVTSWKQVVGHWFTASGEPATCIYEALYQCLEQLTSVGLVVKMIICDQGAKNRCVSKQMGITPEKPYFMYKNEMVFFMWDSPHLIKSMRNNLMCYNYRWKNGVAKWDHILTAVKCDDPLRLRLLPKVNLRHVDFKRNSFRKMKVKFATQVLSRSMSTAMLVLQIKGILPADSTNTADCVQDLNDLFDCFNSTKRSDKLSYRYAFSSSSRHRLFLQDMLKHLTRSQFLDCPRQPDCLRGWILNIRSLLMLSEHMLSNYGVGEIKTRLLNQDALENTFSIIRRQHGCSDHPTAKQFQSGLKALSLSSMSKLPSSSNCEEEVERALVCVSNLKNCSDLSSRGDGETELEECQDNIAETPLGPVEQNAFYYCSGFIIKQFFARHKNCDNCKRQLLVQPNERVMTQNYQLFTYFKAYSEALGTEFGNLCIPAEQAFDVLQKMEGIFFSRFHVIAHRTGMPRSSEGVKRPPIDPGPLEVAITEVRNGSSINKAAEAHGLSRSTLQSYVKKMLGGETPTVVNNNCAH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -