Basic Information

Insect: Leptopterna dolabrata
Gene Symbol: -
Assembly: GCA_954871275.1
Location: OX940977.1:63339248-63341341[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 7e-09 1.9e-06 29.5 0.1 2 43 16 57 15 59 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	7e-09	1.9e-06	29.5	0.1	2	43	16	57	15	59	0.92

Sequence Information

Coding Sequence: ATGGTTCGTACATATAAAAAGAAAACTGATCGAGCTTTCATTAATGAAGACCAAGTCCGGAGAGCCATCAACGCAATCCGCAATGGAATGAAGATAGCAAGAGCTGCAGCAGAGTATGGTGTCAAAAGAACAACACTCATGTTTCGCCTGAAGAAGAGTAAGATAActaccaataataataatgattcaGGGAATGAATCTGATAATTGTGAAGAAGCAAGCAGGGCACTCAAGTTTGGCAGTAAGTACAGTACTCGAAAAGTTTTTACTGCAGCTCAAGAAAAAGAACTGGTACAGTATTTGACCAAATGCAGCCTACTGCATTATGGGTTGTCCAGAAAGCAGCTTCGTACTCTTGCTTTTGATTATGCCCAGTTCGTGAAGAGCCCAAATATTCCTCCCTCATGGATTACACATCGCAAAGCCGGATTAGATTGGATTAGTGATTTTGGTAAAAGGAATAGCGAAGTATTGAGTTTGAGGAAACCTGAAAATACTAGTCTTGCAAGGGCTACTGCATTTAATAAGCCTAGAGTAGATGAATTTTTCTCAAATCTCAGAGAGGTCCTAGAACGATACAAGTTTAAGCCAGAGCAAATATTCAATGTAGATGAGAGTGGTCTCAATACTGTAACTGAATCCGTGAAGGTGTATGCTCCCAAGAAATCCAAGCAGGTAGGAGCTGCGTCCTCTGCTGAACGTGGGGAGCAAACTACTATTGTCGGTATAATATGTGCCGCAGGAACGTTCTTACCCCCTGTCTACGTGTTCCCACGCGTAACACAAAAATGTATCGATGATATGATGAGTGATGATGATGGACCACCAGGTTCACTCGGACTTGGCACAAAAACTGGATGGATGACAGCTGAAAGCTTTCTTCAGGTTCTTCAGCACATCAAGAAACATTCGAAATGCTCAACAGACAATTGTATTCTATTACTGCTAGATAACCATAGTTCACACATTACTTATGAAAACATTGAATACTGTAAGAAAAATGGAATAGTATTGCTTACTTTTCCACCACACTGTTCTCACAAGCTCCAGCCTTTGGATGTTACTGTATTTGGACCATTGAAATCTCGTTACAGAGCCTCAATTCATGATTGGTTAGCATCAAAACCAGGCCTTCACGTTAAATTAAGGCACGTACTCAAACTTTCAAAAGATCCGTTCCTGCAATCTTTTACTCCAGCTAACAtaataaaaggtttttcaacCACTGGTATTTACCCTCTCAACTCCAATATATTTCCAGACTCTGCTTTCCTTCCAAGCGCAGTCACTGATACAGACATAACTGGTGAAAATCCCGAGAATTTGAATGTACAATTTGATAGCCCAGCAGTCAAAGGTGTCAGTACTGAAGTGAACTCTCAAGTTGATGAACCTTCCTCATCCACCATCATTGACCTCCCACCTACTGAATGTCCTCTTGCACTAAACCAATGTACCGAGCCTTTTCAACAAACAAAATTAGATGAATTGGGACCTTCAACTAGTAAGATGATTCCGAAATTGACCCCAGAAACAATCCGACCATTTCCCAAAAGGCAAATGGGTGCTAGTAACCGTAGGAAAAGGAGCACAAACGGTTCTACAGTGTACACCAACTCTCCAGAGATGAAGAAAATTAAACTTATGATggaagaaaaggagaaaaagtcatcattaaaaaagaaaaactgcaAAACTAAGAGAAAGATTTTCCCCAAAAAAGACTCCAGCGACTCTGACTCAGCTGTTGATGAAATCGAATATGAAGAGAGTCTACAAGAATTACAGTTCCTAATAGACAGTGATAATATAGAAAAAAAAGATTATATCCTAGTGCAATTCCAACCTGATAACAACAAAACTAAATCAAAACTTGTGTATTTCATTGGAGAAGTGGTTGGTTTTTATGGTCTAGAGGAATATAAAGTTTCCTTCTTACGAAGACAGGGGAAAACTTGTGTGTTCAAATTTCCACTAGTCACAGATGAGGCCAGTGTGGCCAGGGTGGACATTATCGCCAAACTTTTTCCTACAAGGTCCTCAAGAAATGTGTTTTCGTTCGCTTATGACTTTTCATTATTTGATCTCCGTTAG
Protein Sequence: MVRTYKKKTDRAFINEDQVRRAINAIRNGMKIARAAAEYGVKRTTLMFRLKKSKITTNNNNDSGNESDNCEEASRALKFGSKYSTRKVFTAAQEKELVQYLTKCSLLHYGLSRKQLRTLAFDYAQFVKSPNIPPSWITHRKAGLDWISDFGKRNSEVLSLRKPENTSLARATAFNKPRVDEFFSNLREVLERYKFKPEQIFNVDESGLNTVTESVKVYAPKKSKQVGAASSAERGEQTTIVGIICAAGTFLPPVYVFPRVTQKCIDDMMSDDDGPPGSLGLGTKTGWMTAESFLQVLQHIKKHSKCSTDNCILLLLDNHSSHITYENIEYCKKNGIVLLTFPPHCSHKLQPLDVTVFGPLKSRYRASIHDWLASKPGLHVKLRHVLKLSKDPFLQSFTPANIIKGFSTTGIYPLNSNIFPDSAFLPSAVTDTDITGENPENLNVQFDSPAVKGVSTEVNSQVDEPSSSTIIDLPPTECPLALNQCTEPFQQTKLDELGPSTSKMIPKLTPETIRPFPKRQMGASNRRKRSTNGSTVYTNSPEMKKIKLMMEEKEKKSSLKKKNCKTKRKIFPKKDSSDSDSAVDEIEYEESLQELQFLIDSDNIEKKDYILVQFQPDNNKTKSKLVYFIGEVVGFYGLEEYKVSFLRRQGKTCVFKFPLVTDEASVARVDIIAKLFPTRSSRNVFSFAYDFSLFDLR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01365347;
90% Identity: iTF_01365347;
80% Identity: iTF_00883870;