Ldol057778.1
Basic Information
- Insect
- Leptopterna dolabrata
- Gene Symbol
- -
- Assembly
- GCA_954871275.1
- Location
- OX940983.1:3673876-3675720[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.4e-09 6.7e-07 31.0 0.0 3 34 27 58 25 65 0.92
Sequence Information
- Coding Sequence
- ATGCTGGAAGTCGTTTCTTACCACTTTTATTTCAACTTACAGATGTCTAAGAAGCAGAATCGAGCTTCTTATGGAGCTGACGATTTGAAGAAGGCGGTAGAGGCGGTACGGAATAAAGAAATGGGGACGCTTCGAGCATCAAAACACTTCAAAGTTCCCAGGACTACGATCAGGGACAACCTCAAACTCCAGGTTGCAGGTGAGTTTTCCCAAAGACCAGTGGGCAGGAAACCAGTTCTCACTCCATGTTTAGAGAGAGAATTGGTTGAGTACTGTTTGGAGATGGAAAAAAATTACTTCGGCCTCAGTCGGAACGACATCAAGAGGATGGCGTTTCAGCTTGCAATAAGGAACGGCTTGCCACACCCATTCTCATCAACCAAGATGTCAGCTGGGCGTAAATGGTTGGCACTATTTATCAAGCGTCACTCAATCTTGTCAATTCGAACCCCGCAGTCTCTGTCCAGGGCCCGCATTCTTGGTTTCAAGAAGGAGAGTGTAACGAATTACTTCAACCTCTTGAAGGCGGAACTCGAGAAGATCAAGTTCAACCCTGCCAGGATTTTCAACGTTGACGAGACTGGGGTTACATGCGTTCAAAGTAAAAATGTCCAGATAATCTCAATGAAGGGGAAAAGAGCTGTGCAAAAGCTATCATCTGCAGAAAGAGGGAAGACCAACACGGTTGTGACGTGCATGTCAGCAGCTGGTCAGTACATACCCCCCATGATCGTTTTCCCGCGTAAACGTCAACACCTGGAACTCATGAAGGGGGCCCCTCCAGGTTCCATTGCTGGTTTCCATACTTCAGGATGGATCCAGTGTGATCTTTTCTGCAGGTGGATGGTCCACTTCTGCAACCATGTCAAGCCAACTGAGGAAGATCCAGTTCTTTTGATCTTGGATGGCCATTATTCTCATACAAGGAACCTAGAGATCATTGACTTTGCCCGCAAGAATTTTATTTCCATCCTCTGTCTGCCTCCCCACAGCACGCATAGAATGCAACCATTGGATGTGGCATTCATGAAACCGTTCAAGGCATTCTACGGCCAAGAAATTGAACGATGGACCACTTCCCATGATGGTAGAATCGTCACCCAGAATGAAATAGCTGAATTGATGGGGAAGGCTTACATGAGAGCAGCTACCATTTCCAACGCTGCAAGTGGGTTCCGTGCCACAGGGATTTACCCGTTCAATGATGGAATTTTTACAGAAGAAGATTTTCTTATTGAGGCCAACCTTTTCAATGAAGCCAATTCTCTCGTCCTCCCTGACAACCAAACACCTAGATCTTCCACGACCAACGCCGCTTCTGCCCTGTGCACCTCGGAAGCATCATGTTTGGGATCAAGCGTGTCACCGAGAGATGTTCGTCCTGTCCCGAAGGTTTCACCCCAAAATACAAGGAAGAGGAAGGGGGGTGAATGTGTAGTCGTCACCAGCTCACCATACAAAAAAAAGTTGACCGATTTCTACGATGCGAAATCCCAAAAGGCTTCAACAAGTGGTCAGCAGAAACTTTCAAAAAAAGGAGGttccaaaaagaagaaaaatacaaagaaGAAGCCACGAAAACGCCCGTCATCCTCCTCCAGTGAAGATGATTCAGCCGAAGACGTCCCCGTCGTTGACACGGACGACGACATGGACATCGATGTTGAAGATTCCGAAGATGACGACAACGACGTGCAGTGTTCGTTTTGCGGCAAACGATTCTCTGACGACAAAGGAGGAGAACAGTGGTTGCAATGTGTGCAATGTTTTTCTTGGAACCACAGGTTCTGCGACGCTGCTTCCGGGGAATCAAAAAAATATTACAAGTGTACCTTTTGCTTATAA
- Protein Sequence
- MLEVVSYHFYFNLQMSKKQNRASYGADDLKKAVEAVRNKEMGTLRASKHFKVPRTTIRDNLKLQVAGEFSQRPVGRKPVLTPCLERELVEYCLEMEKNYFGLSRNDIKRMAFQLAIRNGLPHPFSSTKMSAGRKWLALFIKRHSILSIRTPQSLSRARILGFKKESVTNYFNLLKAELEKIKFNPARIFNVDETGVTCVQSKNVQIISMKGKRAVQKLSSAERGKTNTVVTCMSAAGQYIPPMIVFPRKRQHLELMKGAPPGSIAGFHTSGWIQCDLFCRWMVHFCNHVKPTEEDPVLLILDGHYSHTRNLEIIDFARKNFISILCLPPHSTHRMQPLDVAFMKPFKAFYGQEIERWTTSHDGRIVTQNEIAELMGKAYMRAATISNAASGFRATGIYPFNDGIFTEEDFLIEANLFNEANSLVLPDNQTPRSSTTNAASALCTSEASCLGSSVSPRDVRPVPKVSPQNTRKRKGGECVVVTSSPYKKKLTDFYDAKSQKASTSGQQKLSKKGGSKKKKNTKKKPRKRPSSSSSEDDSAEDVPVVDTDDDMDIDVEDSEDDDNDVQCSFCGKRFSDDKGGEQWLQCVQCFSWNHRFCDAASGESKKYYKCTFCL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01365343;
- 90% Identity
- iTF_00883834;
- 80% Identity
- iTF_00883834;