Ldol036962.1
Basic Information
- Insect
- Leptopterna dolabrata
- Gene Symbol
- -
- Assembly
- GCA_954871275.1
- Location
- OX940977.1:58598721-58607084[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.091 25 6.8 0.0 3 36 78 110 76 114 0.93 2 2 8.4e-07 0.00023 22.9 0.0 1 40 625 664 625 668 0.93
Sequence Information
- Coding Sequence
- ATGGTATTTGAAGAAATATTTGATGTTGGAGGTCTTGATATAGAAAGAGAAGAATACGATGTCAAGGATAACGAGCAGAACGGAGAAGTTGCTGATGAGAAAAGCGGAGAAGAACTTGTGAATGGAGACAATATGACTGAAGTTAATCCAGAACACCGTGAAACACTGAACTTGAAAGAAAAGGAGAGTTCAAAAATGGTGCGGCACAAGATCCACAACTGGACTGGGTCCGACAAGTTGGAGGTAGCAGTAGCCATGGTTCTACAAGGTAAGACCCTACGAGAGGTTGCCAAGAAAACTGGACTCTCAAAAAGTGTGCTACATCGACACCCCACAGCCAGGAGGAAGGGGAAATTCTTGAAAAGGCAAGAGGGGCAGCCCGTATTATCAAGCGAACTTCAGACCATGCTGAAGGATTTCATTTTGGTGTTGGCTGAGTGGGGATACCCATTGGATTCATTCGACCTGAGGCTTTTGGTGAAATCCGTTGCTGATACCAGGGGGTCGAAGCTGCCGTTCAAAGACAACCTTCCTGGGTATCGCTGGGCAAGAAACTTTGTGATGAGGCACAAAAAGTTCCTAACTAACAGACTGGTCCAGAACATCAAACGGTCTCGGGCTCAAATCTCTCCAGAAATAATTATCAACGCTTATTTTGATAATATTGAAACAACACTGGAGGGAGTCCCCCCCACCCATATATTCAACTACGATGAGACAAACTTAAGTGACGATCCTGGTAGGAAGCATTTTTTGATGAGACGAGGGTGCAAATACCCGGAACGGGTGATGAACTTCAGCAAAACTGCCACATCTCTCATGTTTGCTTGTTCAGGTGCTGGTGAAATGCTACCGCCGTACGTTGTCTATCGAGCCAAGTATGTATACCATACTTGGACCCTCGGAGGACCAACAAAAGCTCGATACAATGCCACACCATCGGGCTGGTTCGACGCTAGGTGCTTCGAAGATTGGGTTATAAAGGTGGTTGTTCCCCACGTTAAAAAACTGAGCGGTCGAAAAGTTTTAATTAGGGACAACTTGTCGTCACATATCTCCGCCCACTGCGTTGAGCTCTGTCAGAAACACCAAACTGAGTTTGTATTCCTGCCAACAAACTCAACCCACCTGAGACAACCCCTTGATGTGGAGGTATTTCGACCAACGAAAATTGCATGGCAGAAGGTTCTGCTTCCTTGGAAGCTGCACGAAGGAAGAAGGGAGACCACCATACCAAAAGAGGCTTTTCCAAAGCTCTTGAAAAATCTCATGGATCAACTGGCTCCGCGGATGAAAGAGAACATTGCCTCAGGTTCCCGGAAGACTGGCCTCATCCCGGTAAATCGGGAAGAAGTTCTTAACCGCCTACCCAAGAACCCTGAAGACATTGAAGCCGAAGACGAAGCTGTCAGGGGAGCTATCGACTCTTCCGTCATTGAACTCCTCAAAGAGCTTAGAGGGCCAAATGAGAAAACTCCGAGACCTAGAAAGAAAAAAGTGAGCATAACTCCTGGGAAAAGCGTTGTTGGAGCTGATTTTCTCAGTGAAGAAGACGAATCTGACAAGCCCGACGAGGAAACGATGGAAGTGGAGGAAACGATGGAAGTGGAGGAAGCTGGTGGCAACGATGCTGAACCTGAAGACGTCAGTGAAGAATCTGACGGTGACGATGAAGAACCTGGACCATCAACCTCTGGCCAGAGGTCCCTGGCCGAAGATGTCTGTCAGCAGCTCGAAGGAACAGAATTCTCAGCAGCCTACAGGATTTCTGGTCAAGAGCTCAGCATCGGCGATTGGGTCATCGTGAAATTTCCCAAAGCAAATGGAAAAATGGTGCGACATTACGTGCCAAAGAATCGTGAGAAGACGTATTCTGAAGAGGATCTGAAGATTGCACTTCAAGCTGTAAGTAATAAAATCATGACGCCGTACAAAGCATCTAAGACGTACAACATTCCATTAATGACGATCTATAGCAGGGTCAAGGGGAGTAGAGGGAAACTTAAAGGATCAGTAAGAGGACGCCAGACAGCTATACCACCTGATCAGGAGAAGAAACTCGCTGAGGGTTTGAAAACTCTCGAAAAATGGGGCTTCGGTCTCACAAGAAAAGAGCACGAGCTACTCTGGGCCAAGTTGAGACTGTTGGGAGTGAGCTCTCGGTTCATTAAGGTGATGGAATCATTCTATGGAGGAGCCTGTTTCAAGATTCAGCCACTGGTGGGCGTGGAGTTCAGCCAGGATATAACGGCGGGGGTGCTTCAGGGAGATTCACTCAGCCCCCtgttattcatcattttcatgtCTGACTGTGTCAATTTTATGAGGGAGAGGGGCTGCCATGGTATACCGATGGGTGGGCGGGAGCTACTGCTGTTGGCCTTTGCTGATGATTTGGGGCTTCTGGCGGACTCGCCGCCAGACGCCCAGCGGAAAATGAATGCTTTTAAGGAATACTGTGATGTGAACAAGCTAACCATtaatcataaaaaaaccaaAGTTATGGTCTTCTGCCGTGGAAGAATGAGAAGGATGAGACCCATAATCTGTGGAGGGGTCTCCTTGGAATATGTGCGTCAATTCCAGTACTTGGGAGTTACCCTCTCAAGCTCAGGTCAGTTCAAAGTGCAGGCGAAGCAGGCAATATCCAAGAGCAAAATGGCGATGGGCTGTACTAGAGAAATCTTCTGGAGGGGCAGAGTAGTGTCATGGGATGCCAAGACTaaactttttgagaccatggTCGAGTCGGTCCTGCTGTATGCGGCGGAGGTCTGGGGTATATGGTGCGGAGAAGAAGTTGAAGTTGTCCAGTCAGCTTTCCTAAAATCCCAATTGGGCTTGCCGAGAAACACCCCGGGACACTACCTTAGGCTTGAGTGTGGACAAGTTCGTCTTGGCGCCCACATTTTTTCACGTGCGCTCAAATACCTAGCTAAGATCTTGAAGATGAGCAGTGGGAGGTGGCCGAGAGTCTGCTTGGAGGAGTTGATGAGGTCGGATGCTGATGGCTCAAATAATGATCCAAGGTACAATTGGTTCACCAAAATAAAATCCTCACTGTTAGCGATTGGAGCGGCGGATCTCTTGGAGGACATGACCTCTGACAGGCTGGGTGTGGAACTGAATGGCTTACTGCAGCGGTACATCAACCATTGTTGGTCCCTTGATATTCAGAGGACTTACGATTCTGCATTCAATCCGCTCTACAGGCGGATAGTCGAGTTTGGAGGAAGACAGCACTATTTGGGGAACCACAGGAACATTCATGTGGAGAGGCTCTTGGCGCAGATGCGCCTTGCGTCGAAGGATATTACCCGCTTTTACCATAAGAGAGTGGCGTACACAATAGATGGCACGATGCCATGTATGCACTGCAATATGCGAGCTGTAGAGAATGCCATACATTGGGTTCTGCTATGCCCGCTGTATGAACCATATCGGCGCCACTACCTTTCGTTTTACATAAAACCGGGGAAACCACTTGGAAGCATGAGTACCAGCGAGCTGGAATCGGTTCTTTGTGATATCCTGGACGTGGGTGAAGACAGTGCGAAGGCTTTCGCAGTCTACAACTTCGTGGCCCAATCTCTGATGCTGCGTGCCTTCTCTGCAAACGAATGA
- Protein Sequence
- MVFEEIFDVGGLDIEREEYDVKDNEQNGEVADEKSGEELVNGDNMTEVNPEHRETLNLKEKESSKMVRHKIHNWTGSDKLEVAVAMVLQGKTLREVAKKTGLSKSVLHRHPTARRKGKFLKRQEGQPVLSSELQTMLKDFILVLAEWGYPLDSFDLRLLVKSVADTRGSKLPFKDNLPGYRWARNFVMRHKKFLTNRLVQNIKRSRAQISPEIIINAYFDNIETTLEGVPPTHIFNYDETNLSDDPGRKHFLMRRGCKYPERVMNFSKTATSLMFACSGAGEMLPPYVVYRAKYVYHTWTLGGPTKARYNATPSGWFDARCFEDWVIKVVVPHVKKLSGRKVLIRDNLSSHISAHCVELCQKHQTEFVFLPTNSTHLRQPLDVEVFRPTKIAWQKVLLPWKLHEGRRETTIPKEAFPKLLKNLMDQLAPRMKENIASGSRKTGLIPVNREEVLNRLPKNPEDIEAEDEAVRGAIDSSVIELLKELRGPNEKTPRPRKKKVSITPGKSVVGADFLSEEDESDKPDEETMEVEETMEVEEAGGNDAEPEDVSEESDGDDEEPGPSTSGQRSLAEDVCQQLEGTEFSAAYRISGQELSIGDWVIVKFPKANGKMVRHYVPKNREKTYSEEDLKIALQAVSNKIMTPYKASKTYNIPLMTIYSRVKGSRGKLKGSVRGRQTAIPPDQEKKLAEGLKTLEKWGFGLTRKEHELLWAKLRLLGVSSRFIKVMESFYGGACFKIQPLVGVEFSQDITAGVLQGDSLSPLLFIIFMSDCVNFMRERGCHGIPMGGRELLLLAFADDLGLLADSPPDAQRKMNAFKEYCDVNKLTINHKKTKVMVFCRGRMRRMRPIICGGVSLEYVRQFQYLGVTLSSSGQFKVQAKQAISKSKMAMGCTREIFWRGRVVSWDAKTKLFETMVESVLLYAAEVWGIWCGEEVEVVQSAFLKSQLGLPRNTPGHYLRLECGQVRLGAHIFSRALKYLAKILKMSSGRWPRVCLEELMRSDADGSNNDPRYNWFTKIKSSLLAIGAADLLEDMTSDRLGVELNGLLQRYINHCWSLDIQRTYDSAFNPLYRRIVEFGGRQHYLGNHRNIHVERLLAQMRLASKDITRFYHKRVAYTIDGTMPCMHCNMRAVENAIHWVLLCPLYEPYRRHYLSFYIKPGKPLGSMSTSELESVLCDILDVGEDSAKAFAVYNFVAQSLMLRAFSANE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -