Ldol060808.1
Basic Information
- Insect
- Leptopterna dolabrata
- Gene Symbol
- clz9
- Assembly
- GCA_954871275.1
- Location
- OX940984.1:11035087-11037027[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 9.3e-11 2.6e-08 35.5 0.0 1 40 16 55 16 63 0.93
Sequence Information
- Coding Sequence
- atggtACGAAATTACAAGAGAAAAAGCGACCGTGCTACCGCATATTCACCTGATGATTTAAAGCGAGCTCTTGTCTCCATCAGGAATGGCGAAATGACTGTGGCGGTGGCGTCGGCGACCTATCGCATTCCAAAAAGTACTTTATGGGACCATATCAAAGGACGGCGGGGACAATTGAGCACTTCCCAAGGTAGGCCCATTGCAATTCCATTTGATCAAGAAGAACGGTTGGCGAATTGCCTGAAAACCATGGAGAAGTGGGGGTTGGGCCTCACAGTTTTAGAAACAAGAATAGCCGTAAAAGGGTGGGTGGACTGTAATATGAAAGAAACGGTGTTCACTGACAACATGCCAGGGAAGACATGGATCCAGAACTTCAGAGCGAGACATGACTTGTCCTTGAAGAAGCCACAAAGTGTAGAATTTGCTAGAAAAAAAGCAATTGATCCCTTCGTTATAAAGGGGTTTTTCAATCTCTTGAAAAGCACCATGACGGAGTTGGGTCTGGACGGAAAACCGCAATACATTTTCAACGTCGACGAGACTAGCTTTTGTCTTGACCCTAGCAAGTCCAAAATATTGGGGAAAAAAGGGCTTCCATCAACTAGAATAACGAGTGGGCCAGGGAGGACAAATGTCACCGTTTGTTTCTGCGGGAGTGCTGCTGGCCAGAAACTCCCACCCCTGTTCATCCTTAAGGGTAAGAATCTTTGGGATCAGTGGATGTTGGGGGACGTTTTCCCCGGCTCTACGTTTGCCGCATCCaccaatggatggatggaaggggaaatatttttaaattggtttcgGAACTGTTTTTTGAAGAACATCGGACCGAACCGTCCAGTTCTTTTAATATTTGATGGGCACTCTACCCATATCACCATTCCATTAATAGAGCTCGCGATGGAGAACCAGGTTGTGCTGTTGAAACTGCCCCCTCATACAAGCCATATCCTACAGCCCCTTGACTTGTCTGTATTCAAGCCCCTCAAGACACTCTGGGACAAGGAGCTAGTTGCATGGCAGAGGCGAAATCTAGGAAAACACCTGCCCAAAAAAATGTTGGCCTCCATAGTTGGAAAGATCTGGTGCAGTTTGAACCCTGAAATCTTAAAACATGGTTTTGCTAGGGCAGGGATCTACCCTTTTAACGACGAAGTGGTTGGAGAAAGCTCCTACGACCCGGAAGCTCTGAAGAGGTGGAAAGTTATGGAAGCGTCACACGCGACTGAAAGTCCAGCTACGAATCCTTCATCAGAAAGTCAAGCTGAAGGGCCTGTTGCCGAACCATCTCCATCATCTTCGACCGGGTCTCCACCCTTGATGCCATCGGAAGACGGTGATGCTATCGTATCTGGAGCAGATACATCTTTTGAGGAAAAGATCCTCAGCTTCTTAAGAGGTGGCCAGCAAACGTCAAACACTCAAAAACGAAAGCGTGTTGGAACAGGATCCGAAGTTTTGACTACTGAGGATGTTTTGACTCGGATTGAAAACgagaagaaattgaaaaaagatcctccaaagaagaagaaaaaaagagcagCAAAGAAGAACGCGACCCCAGAAACAAGcgaggatgaagaagaaataatgGCTCCTAAGAGAAAAACAAGAAGTAGGGCAGCAAAGAAAACACGTTATCCTCAGCCAACCACTGATGATGACGAAGAGGACGAGGACCCGCCAGCAGTGGAGGTGATCGCTCTCGAGCCCATGGAAGGTGATGGCCATCCGGAGGAGAGTGTCAGTTTAACGGTGGCCATGGACGAGGGAGTGCCGTCGTCCTCTAGAGTCCGAATGGTCCTACCCAAAGGCTCCCCCTACAAGAGCCCCATCCCCACCTCGCCAGATCGGGACTCTAGTGACGTAGAAACCGACGTGGAGGCTTTTCTGACATACCTCAAGGATTGTGGTGTGGAAGGACTCCCCAAGTGA
- Protein Sequence
- MVRNYKRKSDRATAYSPDDLKRALVSIRNGEMTVAVASATYRIPKSTLWDHIKGRRGQLSTSQGRPIAIPFDQEERLANCLKTMEKWGLGLTVLETRIAVKGWVDCNMKETVFTDNMPGKTWIQNFRARHDLSLKKPQSVEFARKKAIDPFVIKGFFNLLKSTMTELGLDGKPQYIFNVDETSFCLDPSKSKILGKKGLPSTRITSGPGRTNVTVCFCGSAAGQKLPPLFILKGKNLWDQWMLGDVFPGSTFAASTNGWMEGEIFLNWFRNCFLKNIGPNRPVLLIFDGHSTHITIPLIELAMENQVVLLKLPPHTSHILQPLDLSVFKPLKTLWDKELVAWQRRNLGKHLPKKMLASIVGKIWCSLNPEILKHGFARAGIYPFNDEVVGESSYDPEALKRWKVMEASHATESPATNPSSESQAEGPVAEPSPSSSTGSPPLMPSEDGDAIVSGADTSFEEKILSFLRGGQQTSNTQKRKRVGTGSEVLTTEDVLTRIENEKKLKKDPPKKKKKRAAKKNATPETSEDEEEIMAPKRKTRSRAAKKTRYPQPTTDDDEEDEDPPAVEVIALEPMEGDGHPEESVSLTVAMDEGVPSSSRVRMVLPKGSPYKSPIPTSPDRDSSDVETDVEAFLTYLKDCGVEGLPK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00883757;
- 90% Identity
- iTF_00883757; iTF_00883758; iTF_00883759; iTF_00883760; iTF_00883761; iTF_00883762; iTF_00883763; iTF_00883764;
- 80% Identity
- -