Ldol026074.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Leptopterna dolabrata
Gene Symbol
-
Assembly
GCA_954871275.1
Location
OX940975.1:64590940-64594155[-]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 5.8e-11 1.6e-08 36.2 0.0 1 43 73 115 73 117 0.93

Sequence Information

Coding Sequence
ATGGCAGATGAAAAACAAAAGAGTGGTGGTACCGGTGGAGGCCCTCCAACCCAAATCATCAAATTGGACGCCACCAAATTTGAGCTCCTTCAGCTGATGGGCAAGGAGACGGCGGTGGGCTCTTCGTCGTATTTCGATTCAGACAGCGCTATTGGTGataTTCGCTCCAATATGCCCAGAGAACGGAAGAGGACGACCCAAAAAGCTACACAGTACACCCCTGAAGAACTAGCCGAAGCTGTTAAAGAGGTGAAGGCTGGAAGAATCACAACCTACCGGGCGTCCAAATTGTATGGTATCCCTTACAATACTATAGATGCTCGTGTCAAAGGTAAAAGAGGGGTAAAATCAACAACAATGGGCCGACCTACTGCCCTTCCATctgatgttgaaaaaaaaattgctgatgGGATCAGAGAAATGGAGAAGAGTGGGCTAGGCCTGTCAAGGAAAGATGTGTTGAACCTTGTTGGAGAATATGTCCGACGAAATGGTATAAAAACACCGTTCACAGATGGGATTCCTCAATGTGACTGGTTCATTGCCTTTGCACAGCGCCACAAGTTATCACTGAAAAAACCGCAGAGTGTTGAAATAGCAAGAAGACGTTGCATTGATCCATTTCTTATACATCCTTATTTCGACTTGTTGGATGAAACAATCAAAAAGTTGGGCCTTGAAGACAAACCTAGCCTCATCTTCAACCTCGATGAATCTGGGTTTTCAAAAGATccctcaaaaacaaaaattgttggGCAGATAGGCTATCCTGCCAAGCGCACAGTCAGTTCCCCAGGAAGGGAGAATATATCTGTTTTGCTTACCGTAAGTGCTGATGGGGGTAAGCTCCCTCCTCTTGTTCTTTTCAAGGGAAAAGATGTTTGGGACGATTGGCTTCCCTCACAGGCTTGTATTTATCCTGGTATGTCCTTTGGTGCCACAcccaatggatggatggattcCTTCAGTTTCCAACGTTTTTTCACCAAAACATTTATACCAGCACTTGGTAACGAGAGACCTGCACTGCTGATATGTGATGGTCATAAATCTCACATTTCTCTTGGTGTTGTTGAAGAGGCGAGACGTGAAAACATCACTATCTTGATTTTACCCCCTCACTCATCACACTACTTACAGCCACTGGACCTAAGCGTGATGAAGAGTTTGAAAGATGCGTGGGATGTGAAACTGTTGGAATGGCAGAAACGCAACTATGGGCGGAAGTTGAAGAAGGCAGACtttgtttctttattttcaaaACTTTGGACTGACTTAAAACCGGAATGTATAATCTCTGGTTTCCGAAAAGGTGGGATCTGCCCCTTCAACAGGGATGTAATCCCTGAAAGCAGCTACGATCCAGCAGCACTCCGTCGCTGGAAAATGGGTCAACAGGTTGATCAGCAGAATAGCGCCAGCAATTCGTTCCAGCAAACTGAGCCCACTGCCACTTTAGAACAAGGAAACTCTGGCGATCCTACACCCACCAATTCATTGATCCCTCTTGCTTCTAGTCTACCTCCTGCCAATGCTGATTCTACAGGAGCCCCATCGTCAATCGATTGTGATGATACCCCTTCGATTCAAACCCCAACCTTCACTAACAAAACATTCCAAGAGCTACTTCTTGAAACAGTTAAAAACCAGGGAGAACAGGAGCCTtcaaagagaagaagaagggtGACCAAAGGTAGTACTGGGGTCATTACTTGTGATGAGTTTTTCCaggaattacaaaaaaaagagGCTGATGAAAAAGAGCTTCAGCGACAGCAAATTTTGAAGAAAGGtgaaagagagaagaaaaagAATGCTCCAAAACCTAACGTGAAAAAGCAGAAAAGGAAGCGAAGAAATGACAGAGCAACATCAAGTTCAGAAGAGGACAACTATAGCCTAAGAGATACAGATGATGAGGATGCGGAGGAATACATGGAGCGAATGATTCGGGAAGCAGAGGAAGAATTACAGGAAGCAGATGAAGAAAGGCAGGAAGCAGAGGAAGAAGTACAGGAAGCAGAGGAAGAAGGGGACGAAGCAGAAGAAATGGAACAGTTACCTGAAGAAACAGAAGAGTTACCAAATGAAGCAGAGCAGATGGAAGAGGAAACGGTGAGAGAAAACTCGAAAATAAATGAATTAGATTGGGTGATGGTAAAATTTGCTACAAAAAAAGCAATTAAGTATTATGTGGGCCAGGTTGTAAAATTTGAATGTGGAGATCCCATTGTCAAATGCCTGAGAAGAATCAAGTCATGTACAGCGGAATTTAAGTTTACCTTCCCTCCAAAAGATGATATAAGCTCAGTCGATGAAAGTGATGTCATTCACATTTTACCCACTCCTCGCATTGGGAGGAGAGGGGCAATTGagtttgaatttgattttgcgAGCTTTAACCCAGAGTAA
Protein Sequence
MADEKQKSGGTGGGPPTQIIKLDATKFELLQLMGKETAVGSSSYFDSDSAIGDIRSNMPRERKRTTQKATQYTPEELAEAVKEVKAGRITTYRASKLYGIPYNTIDARVKGKRGVKSTTMGRPTALPSDVEKKIADGIREMEKSGLGLSRKDVLNLVGEYVRRNGIKTPFTDGIPQCDWFIAFAQRHKLSLKKPQSVEIARRRCIDPFLIHPYFDLLDETIKKLGLEDKPSLIFNLDESGFSKDPSKTKIVGQIGYPAKRTVSSPGRENISVLLTVSADGGKLPPLVLFKGKDVWDDWLPSQACIYPGMSFGATPNGWMDSFSFQRFFTKTFIPALGNERPALLICDGHKSHISLGVVEEARRENITILILPPHSSHYLQPLDLSVMKSLKDAWDVKLLEWQKRNYGRKLKKADFVSLFSKLWTDLKPECIISGFRKGGICPFNRDVIPESSYDPAALRRWKMGQQVDQQNSASNSFQQTEPTATLEQGNSGDPTPTNSLIPLASSLPPANADSTGAPSSIDCDDTPSIQTPTFTNKTFQELLLETVKNQGEQEPSKRRRRVTKGSTGVITCDEFFQELQKKEADEKELQRQQILKKGEREKKKNAPKPNVKKQKRKRRNDRATSSSEEDNYSLRDTDDEDAEEYMERMIREAEEELQEADEERQEAEEEVQEAEEEGDEAEEMEQLPEETEELPNEAEQMEEETVRENSKINELDWVMVKFATKKAIKYYVGQVVKFECGDPIVKCLRRIKSCTAEFKFTFPPKDDISSVDESDVIHILPTPRIGRRGAIEFEFDFASFNPE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00883748;
90% Identity
iTF_00883748;
80% Identity
iTF_00883752;