Lsyp010638.1
Basic Information
- Insect
- Leptopilina syphax
- Gene Symbol
- HIVEP1
- Assembly
- GCA_032872505.1
- Location
- CM065470.1:24663480-24684695[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 9 0.00023 0.045 15.5 1.1 1 23 88 110 88 110 0.98 2 9 0.032 6.2 8.8 2.8 1 21 116 136 116 140 0.86 3 9 0.012 2.3 10.1 0.3 1 21 348 368 348 369 0.95 4 9 1.5e-06 0.00029 22.4 1.6 1 23 1051 1073 1051 1073 0.99 5 9 6.4e-06 0.0012 20.4 5.1 1 23 1079 1103 1079 1103 0.92 6 9 0.028 5.5 9.0 0.6 2 23 1715 1735 1714 1739 0.88 7 9 0.00023 0.045 15.5 1.6 1 23 1745 1769 1745 1769 0.93 8 9 0.0073 1.4 10.8 3.8 1 23 1790 1814 1790 1814 0.93 9 9 8.9 1.7e+03 1.1 1.0 1 19 1932 1950 1932 1955 0.89
Sequence Information
- Coding Sequence
- ATGACAGACCCGCAGTTGACgaataacaacaacaataacGATGGCGAACCAAAGTACCtgcacaaaaaattcaaaaaaatggcTTCGACCGAAGTCAGCCAAAATGTGGAGGCTCGAAAGGAAGCACCTGCCGAGGCACCACCACCGCCGCCGCCAGCACCGGCACCAACACCAACTTCCGAGAGCGAGAAGAAAAAGGAGGTAGCATCCGCACAGGAATCCGCGGATAGTGAGCCGATAGTCGAGGTGAAAAAGAGCGGCTACGTTTGCTCTTATTGTAAACTCTCCTGTGCCAAGCCCAGTGTTCTTCAAAAACACATCCGGGCTCATACCAATGAAAGGCCTTATCCCTGCGTTCCCTGCGGATTCGCCTTCAAAACAAAGTCCAATCTCTACAAGCACTGCAGGTCGCGGTCCCATTCTCTCAAACTTGAGGGCACCGAAGCCAACAAGgTATCAGAAGATTCGGACATAAGTCTATCGGACAGTGCGAGCAATGGAACGGGAACACCGCCTCCGCCGCCAACTTTAGCACCGAGCTCCTCCTCATCGACTATAAAGACTGTTAAGACTGGCAAGATATATAAACCCAAGTTCCATACAGCTTTGCATAATGCGAGCAATGAGACTGAGACGTCTTCCAATTCCTCCAGCAGTAGCAGCTCCTGTTCCTCAACTAACATGACACCGAATAATGTTAAACCAAATGCGGAGCGACTGCAGGAGCACATAGATAAAATAATCAGCGACAATCAGGTTATTGTCGAGTCGGTTGATCCACGTTTGCACAAACTCATGCAGCGACAGCAGAGTCTAGTTGAAATCAAGCACCACACCGAACAGCCATTAAATCTCTCCTCGGGCGATGAATCAACAATTCGAAAACGATGCTACAGCGATAGTTTTGCTCAAGACGGCGGCGGCGGCTGCGGCAAAGATTCACAGCAATTAAATAACGATACTTCCATTATTAAGGATCTCCTATTAAAAGCAGGTGATCGCCAATCAAATCACGACGACAGTAATGACAGTAATGATAATTTTGTCTGTCAATTCTGTAAAATCTCCTATATGAGCGCTGATAATCTCGAGGCGCACAAGAAATTCTATTGTAAAGGTGTCATGAGTCCCAGACGAGGAGACTTTCAACTCGATTTAGATAAAAGGGACAACAACGAGTACGATCCCAAGGTTGATTATTACAGTCTCCAACCGCTGCAATCGCCTGGACCACTTCTTGGTAATACGAGACTCGTCGATGCCTACACACCGCCGGCGAAGAAATCGCGAAACGAACCAATGCCCGGCACATTGCGATCACTCGAGGAATTATCAAAATTCCCAAGACCAAATTCACTGCAAATGTTTGGCGGCGAGGTGCGAATATTGGACAACTCAGGAGAGACAAAGACTATGAGGATCGAACCAAGGAAAACTAGTTCACCCACCAGTGAGCACATTCCCTCCAACAAGTGTGCCACGTCCGAAACATCATCCATCGTCGTCAGATCCGGTCTTCATTCTGGTGGGACAATGGTGCACAAACCACCAGGTTGCAGTACACCGGACACAGCATCAAACTCATCTTCCATATCTCTACCAGATAATTCGAAACTATTAGCGCCCATTGTACCAAACATATCAACAACAAATTTAGCGCCCACAATGACGTGCTACAATTATCTGGAACCACATTTGAATCCATTAACAAACATCACTGCCTACAATCCACTGACATTACCGCAAGCAGGAATCGCCAGTATTCTTCACGGTGGTAAAGTAATACCATACGTTCCCGGTATGCCCGGTCCACACACACTGACCAATTCACCCTCCGTAGACATATCCCCCTCAACTCTAACTCCGGGTGATGCAGCAACTTATAAAGTGATACCCGGCATGCCGGGCCTCCACATGATTCCACAGCCATTGAATCTCGCCAGTCCCGTGAAAATTCACCCTCAAAATGTCCCCGGAATTCCCGGCCCCCACGATACAACACTCAATCAACCACTCGATCTTGCCAACAATAAATCCTCGAATTTCAAAACACCCGATGGTAATCGTCATTTAGGCAAAATTCCCTCGGAAAAATACCGAAGTGGTAAATCGCCATCGTTAATTATCACCGATGACGATCGTCACTCCAAGAATAATCCTATCAGTAACAAAACTAAAGAAGAAGAGCTCGCCTTCGAACAAAGTCCAAAGATCgataaagtattcaattattcgaGGTTTGACGACAAGTCACCAAATTCCTACACAAAATTGAGATTCGAGAATAGAAAGCGACACTCGACCTGGAGTGTTGAGGAATTGGAGGAGAGAACCTCCTCCGTCGATATAAATCCAGAGAGAAATTCACTCGACAGGCCAACGACACTCAAGAGTCCCGTCTCTAAAGATCCAATTCTTCCACACGAAAATGGTCGTTTCAAACTAAACGGCGCCAAGGTCAAGCCCGAAACATCATCGCCAGTCATACTCGTCAATCTCGACACCAACAAACCGGAAATACGAAATAAATCACCAGTGACAAATCACGATACAATTTCGAAAATAGACAACAAAGTGGAAATAAAATGGAACGACACGGACAATGAAGAGTCGAGTAATCCGAAATTTTTACGACCCACTTCATTGCCATTAAAACCGGGGACATTTACCCCTAAGAAACATCATGGAATAACGCCAACGGCAAATACATTACCGCTGATAAGTCCCGAGACACCGAGACAGAGGAAGTCGTATGGACAAGTTTTTTTCAATGGACACGCTTACACTTATCTTGGTCTAAAGTGTTCGACACGATTGTATTATTGTACATTGAATAGACCGCAGCCAATGTACGTTATGCAACAGCACAGTTTGTCAATGTATTCTAACTGGAAGATTTGTAAAGATTCACCGCCGGATGTCGATATGGCCCATTACGATTCGCGTCATAGACCTCAGAATTACAGTATTGCCTCGACTAAACAAGAGGATATTATGACTCATTCGTCGCGGCGACCAACAACGCCGATTAGCTCTGACAGTGGATTGGAAAATGATAACCAGGAGAAAGCGAAGAGGGTCAAAATTTTCGATGGGGGCTTCGAGAGTAATGAGGATTACACGTACGTTCGTGGTCGAGGTCGTGGAAGGTACGTTTGCGAAGAATGTGGTATTCGTTGCAAAAAACCGTCAATGCTGAAGAAACATATCAGAACACACACCGATGTCCGGCCATACACTTGCAAACATTGTTCTTTCAGCTTTAAGACAAAAGGCAATTTGACGAAACACATGAAGTCAAAGGCGCATTACAAAAAGTGCGTCGAACTGGGAATTGTGCCAGTGCCAACAGTTGTTTGCGATGAAAACATTGATAAAGAGGCAATCGCACGTCTAACGGCAGGCGGTGGAAACGCTGAGGAATCATCGTCCGAAGATGATGAGACGGAAGGCGACGAAAGTGAGGAATCCGGCAGCGAGGAACATGAAGCGGCCCAAAGTCTCTTGAGTCTCTCCCAACGTACTTCCGGTCGACTACCAGGTCTCTTGCCATCGGGCAGACCAAGGACATATCCATACACACAAACACTTCCCACTAGTTCAGTGACGACAAGTGTAATTTCAACAGTCGTCAGTTGTTCCACTTCAACGACAATCGTGTCCCAAGGAACATCATCAGTCATTCATAATGAACTCTCGAATAGATATTACTTCCCCTCGAATCGTTCATCATCCGAGGAATCACGATCAAGTGTCATTCAATCATCGATAAAGAATGAATCTGACGTGGAAATGGAATCAGCCAGTGATAATTCGAATACACGACACTCATCATCATCAGCATCATCATCAGCAGCATCCTTATCATCCTTATCATCCTTATCATCATCACAGCCAATGGATTTGACCATAAAACAAATTTCACAATCCCCCACACAACGAGCAAAGCCAATGGATATTTTAACACCAGTCTCCGAACCTGTTCTCCTGCAAACAATCGTCCAGAGTATGGAGAGATTACCACTTCACGGCAGAGAATGGAAACCAGAGACTGATGGTCACATGCTTCAGGCTTATCTCACCGAGAGACATGTAATGGACAGTAAGATGAAGGAGCAATATCGCGTGGGTAAAATTGACAAGCATATCAAGGAACGGGAATTATACTTACAGCAGCATAATTCAAATCTCAGCGTTGAATCTCATGGTGTACCAACAGTAACATACACTGATCCGACAAAATTACAACAACCCACCGTTCTCGAGTCAAGAATCAAGAATATGTCGAAGCAGGCTTCGGACGATATCAAACACGAAATCAGAGAGAAGATTTATCTGAATAATCTCAACGTTGAAAGGCGTCCATTTGATATTGATTCGATCTACAAGGATAAGGATAATTTATCGCGATCAACGAATTTACGCGAATGCTTTGAACCACGCTCCATCAACACAATACCACCAAGAACAATTGACTATAATTTAATGAATCTTTCCGAAAGGCCAAATTTCGTCATCGATTCAATGAATGAAAAAACATTCATTCAGGACGTGAATAATCGAACCAAGAATGACGTCGATCGTAATTCAATGTTCAATGCAATGAAAATGATGAGGGAAGTCGAGAGACCGCAAACAAATAGATCTCACACACCAGATTTAAGGAACAATGAAATTCGACCACCGAGTCGTGAGATGCGTAACGTGAATCAAGATTTTAGATCGACGATGACgacaacgacgacgacgacaCATCCTAGAACAAAACAAGAATTTTCTGGCCAAATGGAAATTGAGGCAAGATCACCGAATAGAGAGACGAGAATGATTGCTGAATATAGAACGACGCCGGAAACTGTTTTACAACCGGCATTACATGAGTCGACGAATTTACATCAGGAATTACCAAGAACACAGGGAATGGATATTCGCGTTGGAGAGAGATTTGATTCAATTGAATTGACCAAGCAGAGCATTAACGAGAGTATTAAGCATTCGATGCAACGAAAAATGGTCGTTGGTGGTCCGCCCTTTAGGATTCCATCGTCAACGGGAGGTAATTCGAAACCTCAAGCGGAATTCCTGCAGCCGTCGAGTGGTCCAACGCCAAATTACGTTAGtGTAATGGAGGATGGTCGTAGTGTTTGTGGAATGTGCAATAAAGTCTTCAGCAAGGACGCAAAGGAAAGTCATTTAAGGTTGCACATCAACATTCATTATTTCGAGAGGCCATTCAGGTGTGAAAGTTGCGCAATTCCTTTCAGAACAAAGGGCCATTTAACGAAGCATCAACGTTCTATTTCTCATCGTAACAAAGTTAGTATGACTTCCACTTTCGGAGCAGCTACCAGCAGCAATCCAAGACCCTTCAAGTGCAACGATTGCAAAAGTGCATTTAGAATACATGGACACCTGGCTAAACATTTACGTAGCAAAATGCATATTATGAAACTCGAATGCCTAGGAAAATTACCCTTTGGAACCTACGCCGAAATGGAACGATCTGGTATCAATCTCAACGATATTGATACCACAGACTGTGATAATAGTCTTGTCAGTCTTCAGttGCTGGCCCAGAAGCTGTACGAGAAAGATCCAAGTAAAATGGGTCAATGGGATCCGGAATCGGCTgctaatcaaataaataataaaggtGAAAATTCATGTGACGAGAGCGATGAACTACCATCATCACATTCAATTCATTCATACCAATCGTCTCAAATTGTCCCCGATGCCGAGGCATCACGAACATATCATGTGCCAATTCACGAGGAAACAAAAACCCTTACGTTCAAGTGTCAAATTTGTTCTGTATCAATGCAAACATTAAATGAATTGCAAGTTCACTGTTTTGTCGAGCACAATATTGAAACCGATACAAGGGATAAGGATGGAATAAAATCGAGATTCATCGACGAAATACCAATTCGACAAAATGACAGTGCAAAGAAACTAGAAGATATATAG
- Protein Sequence
- MTDPQLTNNNNNNDGEPKYLHKKFKKMASTEVSQNVEARKEAPAEAPPPPPPAPAPTPTSESEKKKEVASAQESADSEPIVEVKKSGYVCSYCKLSCAKPSVLQKHIRAHTNERPYPCVPCGFAFKTKSNLYKHCRSRSHSLKLEGTEANKVSEDSDISLSDSASNGTGTPPPPPTLAPSSSSSTIKTVKTGKIYKPKFHTALHNASNETETSSNSSSSSSSCSSTNMTPNNVKPNAERLQEHIDKIISDNQVIVESVDPRLHKLMQRQQSLVEIKHHTEQPLNLSSGDESTIRKRCYSDSFAQDGGGGCGKDSQQLNNDTSIIKDLLLKAGDRQSNHDDSNDSNDNFVCQFCKISYMSADNLEAHKKFYCKGVMSPRRGDFQLDLDKRDNNEYDPKVDYYSLQPLQSPGPLLGNTRLVDAYTPPAKKSRNEPMPGTLRSLEELSKFPRPNSLQMFGGEVRILDNSGETKTMRIEPRKTSSPTSEHIPSNKCATSETSSIVVRSGLHSGGTMVHKPPGCSTPDTASNSSSISLPDNSKLLAPIVPNISTTNLAPTMTCYNYLEPHLNPLTNITAYNPLTLPQAGIASILHGGKVIPYVPGMPGPHTLTNSPSVDISPSTLTPGDAATYKVIPGMPGLHMIPQPLNLASPVKIHPQNVPGIPGPHDTTLNQPLDLANNKSSNFKTPDGNRHLGKIPSEKYRSGKSPSLIITDDDRHSKNNPISNKTKEEELAFEQSPKIDKVFNYSRFDDKSPNSYTKLRFENRKRHSTWSVEELEERTSSVDINPERNSLDRPTTLKSPVSKDPILPHENGRFKLNGAKVKPETSSPVILVNLDTNKPEIRNKSPVTNHDTISKIDNKVEIKWNDTDNEESSNPKFLRPTSLPLKPGTFTPKKHHGITPTANTLPLISPETPRQRKSYGQVFFNGHAYTYLGLKCSTRLYYCTLNRPQPMYVMQQHSLSMYSNWKICKDSPPDVDMAHYDSRHRPQNYSIASTKQEDIMTHSSRRPTTPISSDSGLENDNQEKAKRVKIFDGGFESNEDYTYVRGRGRGRYVCEECGIRCKKPSMLKKHIRTHTDVRPYTCKHCSFSFKTKGNLTKHMKSKAHYKKCVELGIVPVPTVVCDENIDKEAIARLTAGGGNAEESSSEDDETEGDESEESGSEEHEAAQSLLSLSQRTSGRLPGLLPSGRPRTYPYTQTLPTSSVTTSVISTVVSCSTSTTIVSQGTSSVIHNELSNRYYFPSNRSSSEESRSSVIQSSIKNESDVEMESASDNSNTRHSSSSASSSAASLSSLSSLSSSQPMDLTIKQISQSPTQRAKPMDILTPVSEPVLLQTIVQSMERLPLHGREWKPETDGHMLQAYLTERHVMDSKMKEQYRVGKIDKHIKERELYLQQHNSNLSVESHGVPTVTYTDPTKLQQPTVLESRIKNMSKQASDDIKHEIREKIYLNNLNVERRPFDIDSIYKDKDNLSRSTNLRECFEPRSINTIPPRTIDYNLMNLSERPNFVIDSMNEKTFIQDVNNRTKNDVDRNSMFNAMKMMREVERPQTNRSHTPDLRNNEIRPPSREMRNVNQDFRSTMTTTTTTTHPRTKQEFSGQMEIEARSPNRETRMIAEYRTTPETVLQPALHESTNLHQELPRTQGMDIRVGERFDSIELTKQSINESIKHSMQRKMVVGGPPFRIPSSTGGNSKPQAEFLQPSSGPTPNYVSVMEDGRSVCGMCNKVFSKDAKESHLRLHINIHYFERPFRCESCAIPFRTKGHLTKHQRSISHRNKVSMTSTFGAATSSNPRPFKCNDCKSAFRIHGHLAKHLRSKMHIMKLECLGKLPFGTYAEMERSGINLNDIDTTDCDNSLVSLQLLAQKLYEKDPSKMGQWDPESAANQINNKGENSCDESDELPSSHSIHSYQSSQIVPDAEASRTYHVPIHEETKTLTFKCQICSVSMQTLNELQVHCFVEHNIETDTRDKDGIKSRFIDEIPIRQNDSAKKLEDI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00881557;
- 90% Identity
- iTF_00881557;
- 80% Identity
- -