Basic Information

Insect: Leptopilina syphax
Gene Symbol: -
Assembly: GCA_032872505.1
Location: CM065468.1:11977615-11981106[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.0011 0.22 13.4 1.0 1 20 108 127 108 128 0.96

2 12 0.039 7.6 8.5 6.6 2 23 256 278 256 278 0.91

3 12 0.0089 1.7 10.5 0.2 2 23 343 365 342 365 0.96

4 12 0.0029 0.57 12.1 1.2 1 23 515 538 515 538 0.96

5 12 0.00011 0.021 16.6 1.2 1 23 588 610 588 610 0.97

6 12 0.00049 0.096 14.5 0.2 3 23 637 658 635 658 0.93

7 12 0.0078 1.5 10.7 3.6 2 23 701 723 700 723 0.96

8 12 0.11 20 7.2 4.2 3 23 738 759 736 759 0.92

9 12 6.2e-05 0.012 17.3 0.2 2 23 806 828 806 828 0.96

10 12 0.049 9.5 8.2 1.6 1 23 906 928 906 928 0.98

11 12 0.00036 0.07 14.9 4.2 2 23 943 965 942 965 0.96

12 12 0.027 5.3 9.0 0.5 1 23 1038 1061 1038 1061 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.0011	0.22	13.4	1.0	1	20	108	127	108	128	0.96
2	12	0.039	7.6	8.5	6.6	2	23	256	278	256	278	0.91
3	12	0.0089	1.7	10.5	0.2	2	23	343	365	342	365	0.96
4	12	0.0029	0.57	12.1	1.2	1	23	515	538	515	538	0.96
5	12	0.00011	0.021	16.6	1.2	1	23	588	610	588	610	0.97
6	12	0.00049	0.096	14.5	0.2	3	23	637	658	635	658	0.93
7	12	0.0078	1.5	10.7	3.6	2	23	701	723	700	723	0.96
8	12	0.11	20	7.2	4.2	3	23	738	759	736	759	0.92
9	12	6.2e-05	0.012	17.3	0.2	2	23	806	828	806	828	0.96
10	12	0.049	9.5	8.2	1.6	1	23	906	928	906	928	0.98
11	12	0.00036	0.07	14.9	4.2	2	23	943	965	942	965	0.96
12	12	0.027	5.3	9.0	0.5	1	23	1038	1061	1038	1061	0.98

Sequence Information

Coding Sequence: ATGACGTCGACAGTGGTCCAGGAAGTGAGGCTGCCCGATCCGGCAGAATTGGACAGTGATGGGTCGAGCAGTGAGGATCGCGACGCCAGGAAACGACTTCTTGGCGAGGCAGATTCTTCGGGTCCGAAAAAAAGACGAAAACAATCGACTCCAGTGAGATTTCCCACATCATTAATGTTGGGCGATCATCCCGAGTCAGAGGAAGAGGTCGAGAATGCGGATCCAGATGCGGATGCAGTTTCGGAAGGTAAGCCGAATTCGCCAGCGGCAGAATCTCTTCAAGGTCATCCAAGAATaaaagacgaaaatttaaatacagaatTCCGCTGTCAGTATTGTAGTCAATCATTCGATGACAAAGCGAGTCTCCATATGCATTTAGAATGCGAGCACAATCTTGTAGCGTCCCAAATACATTCCGAGAGTCAATCACCACATTCAAGAAGCAGTcaaattcaaatgaaaatagaaaCGATCAATCAATTAGATCAGTCCCTTAATTTAGTTAATGTCCCaaatattgaaatgaaaaatttagcTTCCCCGTGGCTCGCAGAGCAGGTGCAATCATCACAAAATCAACAACCAAACGAAGAATGGTCAGCCTCAATTCACATGATGCCAAAATTACCAGCCTTACCAAATTTCCCCGGAGGTCTACCTCAATATTTACCATTACCTCCAGGTTTTCCACTAACGGATTCTAGTCAGATTCATAGACCAAATTTAGGCCCAGCGCCAATGAGGATTTTCAATCCCGACGCATATTGTGATCTTTGCCATaaagaattttgcaataaatattttcttaaaacgCACAAAGCAAATAAACACGGGATTTACGTCGATTCACCAAATCCAGTGTCAATCGGCGAAATTGGTGGAGCTCCTGTACCAATTTACCCCATTGGACAAATGCCTCCACAAATAGCAGGACAATTACCAGTACAATTGCCCGGAAACAGTGTCAAATTGGAACCTGCTCTTAAACTAGATAATAATGTTCCCGTACAATCCCCTACAATTCCATGTGATGTTTGTCAAAGAATGTTTTTAACTGAAGAATCCCTTATGAAACACAAACAAACAGTTCACAGTGATCCAGCAGATCAGACGAATCAAATGCAAACAGTGGATGATGAACGAGAAGTACAGTATCAAAGTCCAGGAGCGATGGAGATGCTCTTTAAACAAGAATACGGACTCGAGCAGGAAGACAGTTCATTTATGCCACCGCCAAGGCATCTTTCACCACAGGCCATTCAGCAGGCGAAAGAAGCCAATTTCAGCGTAGAACGTCTCCGGAAACTAGGAGTCCTAAATCCGGACGCATTCTGTGAAATCTGCTGCAAAGAATACTGTAACAAATATTTTCTACGTACACACAAATTCAAGAGGCATGGTATCATAATCCAAGACGAGAAACCACCATTAAACCCCGGTTCAGCAGCCACTTGGCATCAAGTGCAAACCAGTCCCCTAAACCTAATCATCAACGAATCGGGAAACGGATCCGAGTTCAGCGATCGATCGACCGACGACCACGAGTGCAACACATGCGGTATACGTTTCCAAACACTCGGCCTCTACGAATCTCATCGCCAACGAATTCATCCCACCGACGAAGAGACATCATCAAAAAATGAATTCGAAACCGACACTCTAGACCAACGATCAATTTCAAATAACGACTCCATTTCGGAGGATCTCCAAAAACTACAAACCATGATCCTCCAACTAAATGGCatcgaaaacaaaattttccccTGCTTCGTTTGCGGTAAGGAATGCGATTCAAAAGCAACCCTAAAAAACCACATGTCGGAGCATGGTATCACATCCGACGAGCCTAGTTCTCCATCTCACAGTCGAGAAAAGTCCCTGACACCTCTTAGTACAACGACATTCTGTACCCTCTGCGAGAAAGAATATCCCAATCAGGATGCTCTAAGAAAACATATATCCGAAGACCACAAATCAGTCTCAACTAGTGATTTAAATTCCCTCCCTCAGTTACCATCGATTTCAATGCCCACAACACCAACCTCATCTGTACCAACACCTGAACGCAAATCCTCATCACTAACCCCAACTTCCAGTTACTGCGAAATTTGCAACAAAGAACTCTGCAACAAGTACTTCATGAAGACCCACATGCAACGAATGCATGGCATCGAAATCGAAAATGGAGCACAGATCGGTGGCGTGATTTGCAACATCTGCAACAAGGAACTCTGCTCCAAGTACTTTTTACGAGTCCACAAGCACAACACACACGGGATTATCGAAGAGGGCTCAAATCTCTCCACAAACAGCAAACCCGATGCATTCGAAGCCACAATTCCAGACGACTCATCACTAAAACCAGAACAATTAGGCGATTTAAATCATCGCTATTTCACTCATTTCACCGAAGTCTGTCCCATCTGTAACCGACGATTTCGAAGCATCAAATGGCTCAAAGCTCACCTCCTGAGCGATCACGGAAAACTCGGTGTCGACAAATGGAAGGAACTCGAACAACAGTACCAAGCGTCTCACACGAAAAATAATCGCTTACCCGGTACCTCTCGCATTCCCTCAACAAATTCAAATCTAAAAATCCCCAACGGCTTCGAATCGGCCCAAAACAAAGTCCCCGATCTCTCCTCCCTCGGCAATCAAGTTCTCTCCAATCTATTCGGCTCATCAACCGAGGATCAACAATCCAAGAACTACAGATGCTCCTATTGTAACTTCACCACGACAGTTCTACCCTTTCTCTTCCTACACGAAAGATCGCACACAAATCCCCAGGAGAACATTACCGAAAACGAGAGGATCCTCCAGTGTCCTCTTTGTCCAAACAGTTTCTCTCAACCCGATCACTTTCATCATCATCTTTTAACTCGTCATCAATTCCCAAATTTTCTCTCCCAACTACCCCCACCAATATTCAACTCCTTCAGTGACAAAATTCTCGAATCAAAAGAACCCTTCATGGACAAAATTATCGAATCATCAAAAGACGAACCCGACGAACAAAAACAAAGTCCACGAATCACAAACAACGAAAACGACACATCCCAAAAGAAAGCCGACACTGCCGTCCAAGTGACACCACAAGGAGTCTATAAATGCGCTCAATGTGGATTTGCAACAGCAAATTTAAATCGAATCAAAAAACACATCAAGAAGGATCACAAGGCATTTGGCGAACCGACGGAAAGTGTCATTTCAGAATTGAGCAAAATTCTCAAAGAGGTCGCGAATAAGCACAAAGTTCCAGCAAGTTACGCAATGCCTCAGGACATGAACTCAAATCCCGAGAAAACAATAATGCAACCATTTTTAATCGAAGAACAACAATTTCTATCATCAGCGCAAGATTGCAGTACGACTGGAGGCGAAGAATCCGGATCCAAACGTTTCGCTCCGGCCTTAGTCTACCTACCAGTTAAGGCTCGAGTCAGTGGTTCTCTCACGGCATCATTCACCTTAAGTCCCGCATAA
Protein Sequence: MTSTVVQEVRLPDPAELDSDGSSSEDRDARKRLLGEADSSGPKKRRKQSTPVRFPTSLMLGDHPESEEEVENADPDADAVSEGKPNSPAAESLQGHPRIKDENLNTEFRCQYCSQSFDDKASLHMHLECEHNLVASQIHSESQSPHSRSSQIQMKIETINQLDQSLNLVNVPNIEMKNLASPWLAEQVQSSQNQQPNEEWSASIHMMPKLPALPNFPGGLPQYLPLPPGFPLTDSSQIHRPNLGPAPMRIFNPDAYCDLCHKEFCNKYFLKTHKANKHGIYVDSPNPVSIGEIGGAPVPIYPIGQMPPQIAGQLPVQLPGNSVKLEPALKLDNNVPVQSPTIPCDVCQRMFLTEESLMKHKQTVHSDPADQTNQMQTVDDEREVQYQSPGAMEMLFKQEYGLEQEDSSFMPPPRHLSPQAIQQAKEANFSVERLRKLGVLNPDAFCEICCKEYCNKYFLRTHKFKRHGIIIQDEKPPLNPGSAATWHQVQTSPLNLIINESGNGSEFSDRSTDDHECNTCGIRFQTLGLYESHRQRIHPTDEETSSKNEFETDTLDQRSISNNDSISEDLQKLQTMILQLNGIENKIFPCFVCGKECDSKATLKNHMSEHGITSDEPSSPSHSREKSLTPLSTTTFCTLCEKEYPNQDALRKHISEDHKSVSTSDLNSLPQLPSISMPTTPTSSVPTPERKSSSLTPTSSYCEICNKELCNKYFMKTHMQRMHGIEIENGAQIGGVICNICNKELCSKYFLRVHKHNTHGIIEEGSNLSTNSKPDAFEATIPDDSSLKPEQLGDLNHRYFTHFTEVCPICNRRFRSIKWLKAHLLSDHGKLGVDKWKELEQQYQASHTKNNRLPGTSRIPSTNSNLKIPNGFESAQNKVPDLSSLGNQVLSNLFGSSTEDQQSKNYRCSYCNFTTTVLPFLFLHERSHTNPQENITENERILQCPLCPNSFSQPDHFHHHLLTRHQFPNFLSQLPPPIFNSFSDKILESKEPFMDKIIESSKDEPDEQKQSPRITNNENDTSQKKADTAVQVTPQGVYKCAQCGFATANLNRIKKHIKKDHKAFGEPTESVISELSKILKEVANKHKVPASYAMPQDMNSNPEKTIMQPFLIEEQQFLSSAQDCSTTGGEESGSKRFAPALVYLPVKARVSGSLTASFTLSPA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00880002;
90% Identity: iTF_00882466; iTF_00881541; iTF_00880751;
80% Identity: -