Lsyp007532.1
Basic Information
- Insect
- Leptopilina syphax
- Gene Symbol
- Cdc14a
- Assembly
- GCA_032872505.1
- Location
- CM065469.1:25521781-25543888[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 2.1e-05 0.0041 18.8 0.3 1 23 93 115 93 115 0.98 2 14 0.0012 0.22 13.3 0.3 1 23 121 144 121 144 0.96 3 14 0.0031 0.61 12.0 0.9 1 23 222 245 222 246 0.93 4 14 4.6 8.9e+02 2.0 0.5 1 19 329 347 329 349 0.90 5 14 0.0058 1.1 11.1 0.1 1 23 463 485 463 485 0.96 6 14 1e-05 0.002 19.8 1.6 1 23 494 516 494 516 0.98 7 14 0.0095 1.8 10.5 2.6 1 23 522 545 522 545 0.97 8 14 0.00072 0.14 14.0 1.9 1 23 931 954 931 954 0.97 9 14 0.0021 0.4 12.5 0.8 3 23 1200 1220 1198 1220 0.97 10 14 0.59 1.1e+02 4.8 4.8 1 23 1226 1249 1226 1249 0.97 11 14 0.009 1.8 10.5 1.5 1 23 1290 1314 1290 1314 0.97 12 14 5.1 9.9e+02 1.9 3.4 1 23 1395 1419 1395 1420 0.95 13 14 0.1 20 7.2 0.2 2 23 1466 1487 1465 1487 0.94 14 14 0.0045 0.88 11.5 4.1 3 23 1495 1515 1493 1515 0.98
Sequence Information
- Coding Sequence
- ATGAATCGTCAACGTACCTGGCGGTGCTATAGCCTCTTGGTTGGAGGGTTGGAGGTTACGGGTGGACTTCAGAGTTCAGACCGCACAATGAAACCAAAAATTGGACAGTACCAGACGAATTGCAGTGTTGCACAAACCACAATTGTACCAGAATTATTGaTTGGTCAATCGAAGAAGGCGAGTTCatcaattctttcaaattatCGGGATTTATCGAATCATCATATTGAAAATCACAATTCTCCGGAAAGTATTGACAGTGCCATTGAGGAAGAATTCACTTGTAAAGTATGTTACAAAGTATTGAGATCCGCGAGTTCCTTGGAGCGACACATCCTCGTGCATTCTGATGAGCTACCCTTCAAATGTAATCCTTGCGACATGGCTTTCACCAGCAACGGAAACATGAACAGACACTCGAAAATTGCTCACAATCGTCTCTCATCGCACAGTTGTTCCGATTCCGAGGCCAGCAATGACTCGGAATCGCCGACAAAGAAAATCGAGGAATACAATAACAACGAAATTGCCAAAAGAAATTCCCCGGATCTCATTAACGAAAATGAATCTCTTAATTTGTTGAAGAGAAAGTCCCTTGACTACACTGAGGATTTGTCGCCgcagaaaaaattcaagaacaacTTAACGGAGAGTCAGATTAACTACACTTGTCCCATTTGCGGAAAGCAAGATTTCGCCAGCAGTTCACTTTTGGAAATACATCTCGAGCATCATCACTTGGAGATCGACAAGTGTGAATCGGACAATTTGTCCTACAAATGTCACAGGGTTCTCAATCTTCATCGATCGGTCAACAACCTCAACGAGAATTCCTACAGGAATGCCACCAGAAACCTAAGACATTCAGTGGAGGGTTTTGGTGACTTGACCTTCGTCGATTTCACCTCAACCAAATATCCCATGATCGCTAGAGCGAAATGCGAGGAATTTCTGCACAGACCAGCTTCGGGGGAAATGGCCAAGTTCCAGTGTGCAAAGTGCCTGAGAGCTTTTCCCTGCAAGTCAGCTTTGGACTCCCACGAGATGGATTGTGGAATTCCAAACGTTCATTGGAAAGGAAACGACTCCCAGTCGCGGAGGGACGACTTCTTCGCGGGACTGAATCTTCAAAACAAAGCGGCCATGACAGAAGCGAAAGACGGAAAGGACCTCGCCGACATTCAAAGCATCATCAGCATCACGTCGAGTCCGATTCTTCACAGCTTCTCCAGATCCGACGCCAGCACTCCGGACAATTGTAGcaacaaaattaatcaaaacgTCGGGTCGTCTGGTTCATCGGGAACTGTTTCCTCCGAATGTAACGAGGAGGAGACCCAAGACGCCTTCGCCGCCGAATTCAGGAAAATGAAACTAAAAGGCGAGTTCCCCTGCAAACTTTGCGACGCAGTGTTCCCAAATCTGAGAGCCCTGAAGGGTCACAATAGAGCTCACATGGGAGTTCCTCCCGGAATGCCGTATCCCTGCAACATCTGCAATTACACCAGCACTGACAAAACAACTCTCACAAGGCATCTGAAGACGCACAACGGCGACAGACCCTTCGAGTGTGCCCAGTGCACCTACGCCTTCACCACCAAGGCCAACTGCGAGAGACACGTGAGAAATCGCCACGGGGTCCACGACAAGAACGAAGTGCAGAAGACAATCATTTACCACCCGACTGAAGATCTGACGAACGAGGGTCTCGACAGGAGCCTCCCCAGACCAGTCAAAGACGAAGTGAGAAAAACCCTCGTCTTTCCCAAAGAAGAAAATTACCACAATTCCTACACCGTCATGCACATGCATCAGGACATTAAGGTCAAGGACGAGAAGAAGCCCGAGCCGAGTATTAATCCCGCATCTCAACTAAATCCCCTGAACCACTTGAACCACATCAGCCAACTAAGTCAGATAAACCACATGAACATGCAGGCGAACCACTACGAACAGTCGGAAGTGTTCCCCAGACCACGGTCTGTCCAGCCCCTCGAGTTGACCTACAGAAGTTCCCCACAGCATCCAATCGTCAAGTCTGAAAACCCCAGACTGGAGGAAGACCTTGAGTCGAGGTCATCGGAGGGCAGCGTATCTCTAGTCAGTGAAACCAAACCGGACACACACCAAAGAATTCAAGCCAATCCGATGAACCTGAAAAAATCGAGTGATTCCTCCAGCGACGACGGACCTTTGGATCTCTCCATGGACGTACTCGACCTCAGCAAAAAATCCAAAGACAAGGAAGTGAACGGCAAATCCGAAGACCACATCGAGGACCAGAAAGACTTCTACAACTCCGCAAATCCTCTCCTCCTGACCCAAGCCCTCCTCAAGGCGCGTCAAGTCAACTCTCCCCCAACGTCCCTAGAAGCCCTCTACGCCAACGCCCACGCCAACATGATCTACAACAACCTGGCCCTCAGCTCCGGTACCGGCCTCATCTCCCCCTACTTTCTCAACTCCATCTTCGAGCAAGGCTACGCCATGAAGGAGCGCCTCCAGAAGGAACTAGCCCGAGGTCTCCAAACCAGCGGCGGCTCCCTCGTCGAGCAACCGAGCGAAAGTGCCGCCTTCAACAACAACTATCCCCCCTCAGGCCGAACCCCCCAACCAAGGGAGAAGCAAATCCCCTATTCCAGTCTGATCCCGCCAAACGTCTCCAGTAGAGTAGTCTCCCCCAGGGAACGAATCAGCGAATCCCCCTCGTCGAACTCGGTGAAGATGGTCATCAAGAACGGAGTCCTCATGCGCAAACAAAAGCAGAGACGCTACCGAACCGAAAGACCCTTCACCTGCGAATACTGCTCCGCCAAGTTCACCCTCAAGACCAACATGGAGCGACACATCAAGCAGCAACACAACGAACTCTGGCACCGAAGACCCCGGGGCGGACACTCCACCCGAGGTCGACCCCCAGCCAGACCCCCAACTCTCCTCCAAAACGTCGGCTCCAATTCTCCCAGTTTCATCCGAagcaaatcttcaaattcaTCCTACGAACCTCCGGTACAAAAGGAAGAAGACTTTGCCCGACATCCAATTTCCGATCAAGTCAAGTACGCGATTCTCGCTCAGCAACTCAAGGGCAACAAGGGCGACGAGGCTCAAGACTCCGACGAGGAGCTGGTCATCGACGAAGAGGCCAGCGAGCACAGCAAATCAATCAGTCTGCTCCGTAAAAATCTGGAACACTCCGAAAAAGAATGGAAAGAGGAGGAAAAGGAAGAAAGAAAGGAGGAGGAAGTGCCAGAGGCGAAAATCGACAATGGGGATAAAGagggagaaaaagaagaagacgaCAAAGAAGAAGAAACGGAAAAAGAGCCCGAAGAAAGGGGGAAAACCGAAGAAGAAGCTGTCGATCTCGCCAGTGTTCCAAAGCTAATCCAAACCGCGTCGCAAAAATACCCGCAGTTCAAGTCCCAGTATCTTAGCGACGAAGACGGTGTCGCGCACTCCAACAGCGAACACTCCGGCAACCACTCCGGGAGTACGGACGAAAAATCCGAAAACTCTTTGACTTcattgaagaagaagaaaaagaagaagaaaatgaaagCCTCGGCCTACTCCATGGCGCCGAACCGCGTCATCTGCAAATACTGCCACCGCGAGTTCCCCTGGATCTCCTCCCTCCGTCGCCACATTCTCACCCACACCGGAGTGAAACCCTACCGCTGCGACTACTGCATGCTCGACTTCACCACAAAATCAAACTGCGATCGCCACCTGAACCGCAAGCACAAGAGCCTTCTCCAACGCTCCAACGCCCGAAACATCCGCAACTCCTCCTCGCCCGACAATCACGATTCGCGAGTCACAAACAACAACAGTTTCTCCACGAGAAACGTCCCCGAACGACCCTACAAATGCAACCAGTGTCCCAGCTCAACATTCGCCACCCTCGGCAATCTCAAGAAACACCGCTCCACGAAGCACTCGAGGAAAATGAATTCCCGATCTGAAACGTCTTCCAGCGATCCTCAACACTCGGACCATTGTCAGAAGCAGAACGATCACAGCGGCGACGATGGTGGATCGTCGAGTTCGGAGAATGTCGAGACATCGTCGCCGATGGAACTTCATAAGGCTAATCAGAATACTTCTTCCTCGACCAATGAGACGGCGAGGTCTTGTCGAACTTCGCCCACCTCTTCGCCAGGGCCCACGGACACGCCGTTCAAGTGTCATATTCCGAATTGTGACAATGGGTTTGCTGAACGGCAGGACTGTTTGGATCATATTCGAATGCATCATGAGAGGGAGTACGAGATTTTGGTGTCCAAGGGGGCTTTGCAGATGGGAATCACTTCGACTGAGGAGCAACAACCTCCGCCTAATCAACACTCGAGTGATGGGCCCAGGAGTCTGGACTATAAAGACAGAAAGGTTGTCTGCGCCTTCTGCATGCGACGATTCTGGTCGGCCGAGGATCTCCGACGCCACGTGAGAACTCACACTGGAGAGAAACCATTCTGGTGCGATATTTGCGACAGGCGATTCACCCTGAAGCACAGTATGCTTCGTCATCGAAAGAAGCACGAATCAGTCGACTCGACAATGTACATTGGCAGTGGCGATGAGGAAATTTCTCCAAATCAACCGCCAACAATCACCCCAAGAAGCCAACAGCAATCACCAGCTTCAATTGCCGCAACCACTGGCAATTCAATGATTGCCGAAAGAATGTCCCTACCAACTGTGGCCACCATTGCCACCGGAGACGCTGCTCCCAGCAGTCTAACGAGGTTCAATCCCTACGAGAAACTTGCGACTCTCACCAGTAAATTGTCAAATGCCCAGAGCAATCACGACGCAACGGAAACTGGTAACGATCTGATCTCCAATTTACTGGGAATCAAAGATCCCGGTATTGTCGATAAAATGCTCCTTGCTACTCCTGACGATGCTGCTAAACTATTGGGAGTCAAGGGCAATaGTGTATGTACGGTTCACAATCATCCTGACATTAATCATGTCgttgaatttatagaagataaattatattttgccaCATTGAATCCAGGTCATAAAGTTGCACGATGTacggaaaatattttgtttttcaatacgGATGACGAATTTGTTTATAGTCCAATTAATAATGATTTTGGACCTTTGAATCTTGCGTGTGTCTATAGGTTTTGCAACATTTTAcgtagaaaattgaaaaatcccaATAACTGGTGCAAGCAAATTGTTTACTACACAAGTGAAGATGGAAATAAGATGGCAAATGCTGCTTTTCTGATTTCTTCATTCGCTGTGATATTTCTGGAAAAAACACCTagtgaaattgataaaattttagtttcaaataatGTGATTTTAAAACCATTTCCAGATGCTTCTCATACTGAAAATCTCACACTCACACTACttgATTGTTTAAATGGAATGAAAAAGGCACTGAAATGTGGATTTTTCAAtttccaagattttaatttattggaatatgaaaaatattcccAAATGAGAAATGGTGATTTAAATTGGATAATACCTCGGAAATTTATTGGATTTGTCGGTCCAAGTACGAAGGACACAAATTATCATCCAccggaaaaatattttaattacttcgTTAGAAATGGTGTGGAAGCAATTATTCGATTGAATAGAAAATGCTATGATGCGTCAAgATTCAAGAAAATAggaataaaacactacaatctATATATGCCAGATGGTACTGCGCCAACTCGTCGAATACTAGaagaatttcttgaaatttgcGAAAATAACAAGGGAGCTATTGCAGTTCACTGCAAAgctGGTCTGGGAAGAACAGGAACATTGATAGCGGCTTATATAATTAAGCACTATCGATTAAAAGCCAGAGAAGCTATTGCTTGGGTGAGAATTTGCAGACCAGGTTCTATAATTGCTCCTCAACAGAAGTGGCTGGAAGAAATTGAGAGCCTATTGCAGAGAGCAGGTCATTTCTACAGACTAATATGTCATCATAAGAGTAATTCGATTACTCGTCATAAGTACGGTATTTACTCAATCAatcagaaattagaaaaatttcaaaccttcaGTCATAAAGATTATCACACCTTCAAATATTTAGATCATTCAGACTTAAGTGTGTAA
- Protein Sequence
- MNRQRTWRCYSLLVGGLEVTGGLQSSDRTMKPKIGQYQTNCSVAQTTIVPELLIGQSKKASSSILSNYRDLSNHHIENHNSPESIDSAIEEEFTCKVCYKVLRSASSLERHILVHSDELPFKCNPCDMAFTSNGNMNRHSKIAHNRLSSHSCSDSEASNDSESPTKKIEEYNNNEIAKRNSPDLINENESLNLLKRKSLDYTEDLSPQKKFKNNLTESQINYTCPICGKQDFASSSLLEIHLEHHHLEIDKCESDNLSYKCHRVLNLHRSVNNLNENSYRNATRNLRHSVEGFGDLTFVDFTSTKYPMIARAKCEEFLHRPASGEMAKFQCAKCLRAFPCKSALDSHEMDCGIPNVHWKGNDSQSRRDDFFAGLNLQNKAAMTEAKDGKDLADIQSIISITSSPILHSFSRSDASTPDNCSNKINQNVGSSGSSGTVSSECNEEETQDAFAAEFRKMKLKGEFPCKLCDAVFPNLRALKGHNRAHMGVPPGMPYPCNICNYTSTDKTTLTRHLKTHNGDRPFECAQCTYAFTTKANCERHVRNRHGVHDKNEVQKTIIYHPTEDLTNEGLDRSLPRPVKDEVRKTLVFPKEENYHNSYTVMHMHQDIKVKDEKKPEPSINPASQLNPLNHLNHISQLSQINHMNMQANHYEQSEVFPRPRSVQPLELTYRSSPQHPIVKSENPRLEEDLESRSSEGSVSLVSETKPDTHQRIQANPMNLKKSSDSSSDDGPLDLSMDVLDLSKKSKDKEVNGKSEDHIEDQKDFYNSANPLLLTQALLKARQVNSPPTSLEALYANAHANMIYNNLALSSGTGLISPYFLNSIFEQGYAMKERLQKELARGLQTSGGSLVEQPSESAAFNNNYPPSGRTPQPREKQIPYSSLIPPNVSSRVVSPRERISESPSSNSVKMVIKNGVLMRKQKQRRYRTERPFTCEYCSAKFTLKTNMERHIKQQHNELWHRRPRGGHSTRGRPPARPPTLLQNVGSNSPSFIRSKSSNSSYEPPVQKEEDFARHPISDQVKYAILAQQLKGNKGDEAQDSDEELVIDEEASEHSKSISLLRKNLEHSEKEWKEEEKEERKEEEVPEAKIDNGDKEGEKEEDDKEEETEKEPEERGKTEEEAVDLASVPKLIQTASQKYPQFKSQYLSDEDGVAHSNSEHSGNHSGSTDEKSENSLTSLKKKKKKKKMKASAYSMAPNRVICKYCHREFPWISSLRRHILTHTGVKPYRCDYCMLDFTTKSNCDRHLNRKHKSLLQRSNARNIRNSSSPDNHDSRVTNNNSFSTRNVPERPYKCNQCPSSTFATLGNLKKHRSTKHSRKMNSRSETSSSDPQHSDHCQKQNDHSGDDGGSSSSENVETSSPMELHKANQNTSSSTNETARSCRTSPTSSPGPTDTPFKCHIPNCDNGFAERQDCLDHIRMHHEREYEILVSKGALQMGITSTEEQQPPPNQHSSDGPRSLDYKDRKVVCAFCMRRFWSAEDLRRHVRTHTGEKPFWCDICDRRFTLKHSMLRHRKKHESVDSTMYIGSGDEEISPNQPPTITPRSQQQSPASIAATTGNSMIAERMSLPTVATIATGDAAPSSLTRFNPYEKLATLTSKLSNAQSNHDATETGNDLISNLLGIKDPGIVDKMLLATPDDAAKLLGVKGNSVCTVHNHPDINHVVEFIEDKLYFATLNPGHKVARCTENILFFNTDDEFVYSPINNDFGPLNLACVYRFCNILRRKLKNPNNWCKQIVYYTSEDGNKMANAAFLISSFAVIFLEKTPSEIDKILVSNNVILKPFPDASHTENLTLTLLDCLNGMKKALKCGFFNFQDFNLLEYEKYSQMRNGDLNWIIPRKFIGFVGPSTKDTNYHPPEKYFNYFVRNGVEAIIRLNRKCYDASRFKKIGIKHYNLYMPDGTAPTRRILEEFLEICENNKGAIAVHCKAGLGRTGTLIAAYIIKHYRLKAREAIAWVRICRPGSIIAPQQKWLEEIESLLQRAGHFYRLICHHKSNSITRHKYGIYSINQKLEKFQTFSHKDYHTFKYLDHSDLSV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -