Basic Information

Insect: Leptopilina syphax
Gene Symbol: -
Assembly: GCA_032872505.1
Location: CM065471.1:43573448-43579935[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 0.0077 1.5 10.7 1.9 1 20 353 372 353 374 0.95

2 19 0.0067 1.3 10.9 0.0 2 23 378 400 378 400 0.93

3 19 0.44 85 5.2 2.9 1 23 405 428 405 428 0.97

4 19 5.1e-06 0.001 20.7 0.2 1 23 434 457 434 457 0.94

5 19 0.1 20 7.2 1.4 3 23 467 488 466 488 0.95

6 19 0.011 2.1 10.3 2.7 1 23 493 515 493 515 0.99

7 19 3.1e-06 0.0006 21.4 0.4 2 23 521 542 520 542 0.97

8 19 4.5e-06 0.00087 20.9 1.2 1 23 548 570 548 570 0.98

9 19 3.7e-07 7.2e-05 24.3 0.2 1 23 576 598 576 598 0.98

10 19 0.051 10 8.2 1.1 2 23 825 847 824 847 0.96

11 19 5.1e-06 0.00099 20.8 2.4 1 23 853 876 853 876 0.98

12 19 0.0036 0.69 11.8 0.2 2 23 882 904 881 904 0.96

13 19 0.00012 0.024 16.4 0.1 1 23 909 931 909 931 0.97

14 19 0.019 3.7 9.5 0.7 1 23 937 960 937 960 0.92

15 19 1.1e-05 0.0021 19.7 2.5 1 23 977 1000 977 1000 0.96

16 19 0.001 0.19 13.5 0.1 1 23 1012 1034 1012 1034 0.96

17 19 0.014 2.7 9.9 3.6 1 23 1040 1062 1040 1062 0.95

18 19 1e-06 0.0002 22.9 1.1 1 23 1068 1090 1068 1090 0.98

19 19 0.56 1.1e+02 4.9 1.2 1 21 1096 1116 1096 1117 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	0.0077	1.5	10.7	1.9	1	20	353	372	353	374	0.95
2	19	0.0067	1.3	10.9	0.0	2	23	378	400	378	400	0.93
3	19	0.44	85	5.2	2.9	1	23	405	428	405	428	0.97
4	19	5.1e-06	0.001	20.7	0.2	1	23	434	457	434	457	0.94
5	19	0.1	20	7.2	1.4	3	23	467	488	466	488	0.95
6	19	0.011	2.1	10.3	2.7	1	23	493	515	493	515	0.99
7	19	3.1e-06	0.0006	21.4	0.4	2	23	521	542	520	542	0.97
8	19	4.5e-06	0.00087	20.9	1.2	1	23	548	570	548	570	0.98
9	19	3.7e-07	7.2e-05	24.3	0.2	1	23	576	598	576	598	0.98
10	19	0.051	10	8.2	1.1	2	23	825	847	824	847	0.96
11	19	5.1e-06	0.00099	20.8	2.4	1	23	853	876	853	876	0.98
12	19	0.0036	0.69	11.8	0.2	2	23	882	904	881	904	0.96
13	19	0.00012	0.024	16.4	0.1	1	23	909	931	909	931	0.97
14	19	0.019	3.7	9.5	0.7	1	23	937	960	937	960	0.92
15	19	1.1e-05	0.0021	19.7	2.5	1	23	977	1000	977	1000	0.96
16	19	0.001	0.19	13.5	0.1	1	23	1012	1034	1012	1034	0.96
17	19	0.014	2.7	9.9	3.6	1	23	1040	1062	1040	1062	0.95
18	19	1e-06	0.0002	22.9	1.1	1	23	1068	1090	1068	1090	0.98
19	19	0.56	1.1e+02	4.9	1.2	1	21	1096	1116	1096	1117	0.92

Sequence Information

Coding Sequence: atgtccgaGGCAATGTTAAGAGCCGTCAAGAGGAGAAGTCGAGCGAGTAAAAGAACAAAATGGTCTAAAAAAAAACCAACCGAAAAAAAACGTGAGCAAGTCCGACTTTATAATGAAAGAAGAAAGGAACTTGAGAATGAgagaaaattaaaggaaaaaaattctattgaccCAGGAGAGAGACAAATTTTGAGAGTAAAACCCATCGTCGAATTGGAAGATCGAagcaaaatggaaaataatacgGAAACAATACCAAAACCGTTCGTTCAACGAACAATCGTTCGAATTGTCAATCCAAAGGAGAAGAAGAATTTTGAAACTCAATTTCCGAATCAAATATCGaagaaattttacttaattcgTAAACCAAATCAACAGATTCAGACTAATCGGGGAATATTCAATCTACCTGCTCTACCTGCTCTGTCGGAAAATGCGAATCGGGAAAAATTTGTCATCAAGAAAATTCTAGGTGGAGAAATAAAATCGAATGAAAACGTAAAAGAAGGGAATACGTCGAAGTACCAAATTTTGAAACCATTGACAAAAATCGGTGTGATCCATCCAAAGACGTCGGGAAAATTTGTCGTACCCTCTACAGAAGTTATCAGAAAAGAATTAATCCTGTGGGAAGAATTTCGCGACACAGAGACCCACGAACCACAAGTGCAGCAAGATCCGATTGATATCAGCGATTCGATTCTGACAAAAGTTGGAAACACCACGGAACCAAAAAGGAATCAAAAAGGAAACGCAAATTCGAATCTAGTTGAGAAAAAATCGATCGATTCCAAAGAAAATATTCTAGTAATCGACGGCCTTGTTTCATCGTCAAACTCTCAGCTTCCATCAACTTCCAGTAATCAAGAAAAATACGCTGGAAGCCCGACGCCATCTCACGAATATCTACCAGACATATTTACAAATCTAGAATTCAAAGATTCAAGAACCGAAATCACGCAGGACGGGAAAAAGTACAAAACATCCGAATTGACACCAAAAGTAATTCTCCAAGTGAACGAGGACATTGAAAATCTCCCCCTAAACGAGAATTATCCCTGCGATCATTGCAATTGTGAATTCAATTCCTATGCGGATCTAGTCAAACACTggatacatttaaaaaatgtttgcgaAATATGCGACGTTGTCTTCCCATTTCCCTTTCTGCTCCAAATGCACAGACAGGACATTCACAATATCAAAGGCTACAAATGCACTTCTTGTTCCTACTTCCACAGTAATTTATGGAATCTCAAAATCCATCGTCTACGTGCTCATTGCCAGGAATATCGCTTCCCGTGCGAAAATTGCGATCGTGCTTTCAACACTTCTGATTCCCTCCAATCGCACATGGATCAAGATCACAAACCAGAAACCAACAGCAGTGTTCTCTGCGATTTTTGCGGCAGAGCATTCATGAATTATTACACTCTCGAATGTCACATTAATTATTCTCATTCGCAAAAGAAATACACTTGTAAGCAGTGTGATAAAGTTCTGGAAACAAGGGCAATTTACTGTCGTCATTTACAGACGCACAGAATGAAAACAATTGTTTGTGAACAATGTGGCAAGAAATTTGACATTCAATCGGATCTTAAGAGTCACATGCGTCAGCATACGGGCGAAAAACCTTATAAATGCAGTATTTGCTCGAAATCATTCGCAAAAAGTAATACACTTCGTCAGCATTTATTGATACACACTGGTAAACGACCTTATGTTTGTGATATTTGCGGGAAAAGTTTTACACAAAAACCCGGTTTGAGTGCGCATCGAAAATCACATCCCGGCGATCTGCCTCACATGCCTTGTGTATTTATTAACGATATTCTCAGGGAATTGCCTGATGATGCCTATCAGTACGTGGAGGAAAATAGCGAAACCACCAATAATCGAGAAACGAATAAAGATGTGAATCAAGAAGTGAATCAAGAAGCGAATCAAGAAGCGAATCAAGAAGTGAATCCAGAAGCGAATCCAGAAGCGAATCAAGAAGCGAATCTAGAACTGAATCCAGAAGTGCATCAAGAACTGAATCCAGAAGTGAATCAAGAagcgaataaagaaaataaagtaaacaaaGACCTCGAAAAACCTGTCGCCGAACAAATTGGGAAAACAAACAAAACAGAAAACAACGtggaaaataaaatcaattcaatCGAAGAGGAAACTGTAGATTCCGAACCAATTGACGATGCGAATCAACTCATCGACACAATTGAAGCGAACGTTATGGAAATTGTCACGAATGAGGCGAACATTTTGGAAATTGTCGAGAATGAAGCGAGTATTTTGCAAATGAACACAAACGAggagaatattttgaaaatggtggaaaatgatgatgataataatattttggAGGATATTTTAGAGAATACCGAAAATGACAATCAACGAATTAAACTTGAAGACACAATCGAAAGAGTGGatgaaaaaTTTGAGAGCAGTGGTGAGAAAACATGCGAATTTTGCGGGGAAAAATTCCACTTTGTCACGAGATTAGTGGCACATTTACGAATAGAACACGGAATATTAAGACCCTTTAAATGTGATCACTGTGGTAAAACATATCCACaacaatttatgttaaatgccCACGTGAAAAAATCACATACACCAAAAATAGTGCCTTGCAATAAATGTGATTTCATGGGCGTATCAAAATCTGACGTTGAACGACACATTAAACGTTTACACAAGGAGatgaaatttatttgtgaaatttgCAGCGAAGTATTTAATCGTGAGGAGGATTTAATGACACACACGGCAATGCATGAATTTATGCAATTTCATCAATGTAATGCGTGCGGCGCCACATTCGACGATGTTTACACACTCAGGGAACACAATCAATTGTATCATTATAATCAACAAACAATAGAAACACAAAATGAGGAGACAGCACGTGAGCATAAATGTGATATTTGTGGGAAAGTTTATAAATATCGTTCAATGTTGAAGCAACATAAAATAAAGGGTCATTCGGATACGGTGCAAACTGTTGAGAGGCGACGTTATCTTTGTGCACTTTGTGGAAAGGAATTGAAAACTGCGAAGGGCTTGGAAATTCATACACGATCGCATACGGGCGAAAAACCTTATACTTGTGAGGTTTGTGGTAAATGTTTTGCGTGCGAAACACTTTTAAGGACACACAGCGTGACGCACACTGGTGAACGAAAATATTCTTGTGATCAATGCGGAAAGGCTTTTACTCAACGATCAACTTTAGTTGTTCATAAAAGGTATCACAGTGGCGAAAGGCCTTATTTGTGCCCCCGATGCTGTAAGGGCTTTGTCACAAGGACTGTACTTAATACTCATTTAAAATCATGTCGTTGA
Protein Sequence: MSEAMLRAVKRRSRASKRTKWSKKKPTEKKREQVRLYNERRKELENERKLKEKNSIDPGERQILRVKPIVELEDRSKMENNTETIPKPFVQRTIVRIVNPKEKKNFETQFPNQISKKFYLIRKPNQQIQTNRGIFNLPALPALSENANREKFVIKKILGGEIKSNENVKEGNTSKYQILKPLTKIGVIHPKTSGKFVVPSTEVIRKELILWEEFRDTETHEPQVQQDPIDISDSILTKVGNTTEPKRNQKGNANSNLVEKKSIDSKENILVIDGLVSSSNSQLPSTSSNQEKYAGSPTPSHEYLPDIFTNLEFKDSRTEITQDGKKYKTSELTPKVILQVNEDIENLPLNENYPCDHCNCEFNSYADLVKHWIHLKNVCEICDVVFPFPFLLQMHRQDIHNIKGYKCTSCSYFHSNLWNLKIHRLRAHCQEYRFPCENCDRAFNTSDSLQSHMDQDHKPETNSSVLCDFCGRAFMNYYTLECHINYSHSQKKYTCKQCDKVLETRAIYCRHLQTHRMKTIVCEQCGKKFDIQSDLKSHMRQHTGEKPYKCSICSKSFAKSNTLRQHLLIHTGKRPYVCDICGKSFTQKPGLSAHRKSHPGDLPHMPCVFINDILRELPDDAYQYVEENSETTNNRETNKDVNQEVNQEANQEANQEVNPEANPEANQEANLELNPEVHQELNPEVNQEANKENKVNKDLEKPVAEQIGKTNKTENNVENKINSIEEETVDSEPIDDANQLIDTIEANVMEIVTNEANILEIVENEASILQMNTNEENILKMVENDDDNNILEDILENTENDNQRIKLEDTIERVDEKFESSGEKTCEFCGEKFHFVTRLVAHLRIEHGILRPFKCDHCGKTYPQQFMLNAHVKKSHTPKIVPCNKCDFMGVSKSDVERHIKRLHKEMKFICEICSEVFNREEDLMTHTAMHEFMQFHQCNACGATFDDVYTLREHNQLYHYNQQTIETQNEETAREHKCDICGKVYKYRSMLKQHKIKGHSDTVQTVERRRYLCALCGKELKTAKGLEIHTRSHTGEKPYTCEVCGKCFACETLLRTHSVTHTGERKYSCDQCGKAFTQRSTLVVHKRYHSGERPYLCPRCCKGFVTRTVLNTHLKSCR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -