Lsyp011088.1
Basic Information
- Insect
- Leptopilina syphax
- Gene Symbol
- Sry-delta
- Assembly
- GCA_032872505.1
- Location
- CM065470.1:32684982-32687498[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.8e-07 0.00027 21.9 0.0 8 34 45 70 41 79 0.87 2 2 9.6 1.4e+04 -2.8 0.0 30 38 97 105 97 107 0.84
Sequence Information
- Coding Sequence
- ATGGTGTGGGCGGACATTTTCCTGGCCCTCGAGTCTTCGTCTTCATCAAAAATTTTGGATTACTGTCCTCCAATGTTACGCGTAACACGACGACGAAGAggtattaatgaaaattttagaaatctaAAATTTGCGATGGAAGCCATTGATAATGGATTATCGTTGAGAAAAGCCGAATTGAAGTATAACATTCCAAAATCAGTGCTTCATCaattacgAAGGCTTGGCGGTGTGAATGGTCAGAAGGTCACCTATCCCTGCAAAAATTGTGGCAAAGTCTACAATTATTACAGCAGCCTGGCAAGACATCTTAAGCATGAATGTGGAGTTGATCCCAAATTTCAGTGTCCAATTTGTCCCTACAAGACGAAGCATAAATCAAGTCTTAATACTCATCTCAATGGCAGGCACATGAAACGACTTAATGAATTCTACACGATGAATggaaatgattcaattattgacaCAGAACTAAATTGCTCCAgactttaa
- Protein Sequence
- MVWADIFLALESSSSSKILDYCPPMLRVTRRRRGINENFRNLKFAMEAIDNGLSLRKAELKYNIPKSVLHQLRRLGGVNGQKVTYPCKNCGKVYNYYSSLARHLKHECGVDPKFQCPICPYKTKHKSSLNTHLNGRHMKRLNEFYTMNGNDSIIDTELNCSRL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00883393;
- 90% Identity
- iTF_00883393;
- 80% Identity
- iTF_00883393;