Lsyp017597.1
Basic Information
- Insect
- Leptopilina syphax
- Gene Symbol
- ttk
- Assembly
- GCA_032872505.1
- Location
- CM065472.1:2112889-2114842[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.3e-09 6.5e-06 27.1 0.0 1 44 320 363 320 364 0.96
Sequence Information
- Coding Sequence
- ATGTCACCACTTTATAATCTTCGATGGGGTGATTATCTGCCAAATATGCTCAATGTTTTTGAGCAATTACTGAAGAAAGAGGAATACACCGATGTTACATTGTGGTTAGATTCAGGACAAATGGTGGTTAAatgtcataaaattattttagccGCTTGCTCAACATTCTTCGAGGATATTTTCTCGAGCATGAAAACAAAGGGTCATGCGAACGTTGTTCTCACTGACATCAAATATGCCGATGTTAAaccaattttagaatttatctACAAAGGCGAAATTAATGTCACTCAAGAGGAACTTCAGGGCATTTTAAAAACAGCCAATTTCTTAAAGATAAAGGGTCTAATTCCCGAGTACAACGACAAGTACGATTCGAAATTCGAGCCGCAGGTTAATATCACGACATGTGAAGCTGACAGCAATGCGGAAACTTCAGATCAACGAACTCCATGTTGTTCTCATAAATGTGAGGAGAAACCGCATGTTGAAGATCGTCCAAAATCAcaaaaacaacaacaacaacatcaAGAACAACAAAAACAACAACAACCCAATTGGCAACAACAAATGGAGCAGGAGCAAATTTCACAGCATTATTTGTCTGATACGAATATGGAGACACCCATAAAGAGGGTAAAACAAGAGCCAGTCTATGAGGAGACgccattaataaaaaatgttgcgGAGAAAAATTCACGAAAACGTAGTAACGATAATCATTCGCGTTCATCGAATAGTTACGAACAACAACCTCCATGTCCACAGAGTAGTAATTCAGTGCACGAGCGTCCGAAAGATAATTACGATTACTACTTGTCCGATTATAGTATTTCCGAAGATTATTATAAACAGAAACAGGATCAAAGCAATACGAAGAGTCAGAAGAAGAATGTCAAACATGaTCCAGCGAATCCTGCTGCAGGAGCAAAGGAATggcgaaaatacaaaaaatacacacCCGAAGAATTGGAAGCAGCTCTACAGGCAATGCGAATGGGTCTCTCGCCAATTGCAGCCTCCAAGGAATTCAATGTACCGTCTCGCACTCTATACGACAAGGCTAAAAAATTGGGCATCGACACCAAGGACATACGACGAAATTGCAACAGAAGCGCCGCATTTCCAATTGGCATCGGTCGAAATATTAATAATCGCATTTACAGACGATTCCAGGAAAATGACTACGACGAAATGACGACAATCCCCATAGAAAATTTGAAACACGAAACAATAGAGAATTACAAGTCTGAAACAATTGAACCAAGTGAACCAATTGAACCACCCGCCGAACGTGAcgcaattgaattattgaccTATCAACGACCTGATCTTCAAATACGACCCTCAACTTCCGATTCAAATTATGAAAATACAGCCGAAGATCTTTCAATTAAACACGAGACAAGTGTCATCACGTTAAATCCAAAGACTTAA
- Protein Sequence
- MSPLYNLRWGDYLPNMLNVFEQLLKKEEYTDVTLWLDSGQMVVKCHKIILAACSTFFEDIFSSMKTKGHANVVLTDIKYADVKPILEFIYKGEINVTQEELQGILKTANFLKIKGLIPEYNDKYDSKFEPQVNITTCEADSNAETSDQRTPCCSHKCEEKPHVEDRPKSQKQQQQHQEQQKQQQPNWQQQMEQEQISQHYLSDTNMETPIKRVKQEPVYEETPLIKNVAEKNSRKRSNDNHSRSSNSYEQQPPCPQSSNSVHERPKDNYDYYLSDYSISEDYYKQKQDQSNTKSQKKNVKHDPANPAAGAKEWRKYKKYTPEELEAALQAMRMGLSPIAASKEFNVPSRTLYDKAKKLGIDTKDIRRNCNRSAAFPIGIGRNINNRIYRRFQENDYDEMTTIPIENLKHETIENYKSETIEPSEPIEPPAERDAIELLTYQRPDLQIRPSTSDSNYENTAEDLSIKHETSVITLNPKT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00883154; iTF_00881941; iTF_00882280; iTF_00880600; iTF_00880373; iTF_00881400; iTF_00881161;
- 90% Identity
- iTF_00883154; iTF_00881941; iTF_00882280; iTF_00881400; iTF_00881161;
- 80% Identity
- iTF_00883154;