Basic Information

Insect: Leptopilina heterotoma
Gene Symbol: BCL11B
Assembly: GCA_015476425.1
Location: JABAIE010000058.1:6095604-6122384[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 6 0.046 9.7 8.4 0.2 2 23 161 183 160 183 0.96

2 6 8.3e-06 0.0018 20.2 2.0 1 23 472 494 472 494 0.98

3 6 0.00011 0.023 16.7 0.6 2 23 514 536 513 536 0.97

4 6 1.3e-07 2.8e-05 25.9 2.9 2 23 740 761 739 761 0.97

5 6 9.4e-06 0.002 20.0 3.3 1 23 767 789 767 789 0.99

6 6 4.2e-05 0.009 18.0 0.4 1 22 797 818 797 818 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	6	0.046	9.7	8.4	0.2	2	23	161	183	160	183	0.96
2	6	8.3e-06	0.0018	20.2	2.0	1	23	472	494	472	494	0.98
3	6	0.00011	0.023	16.7	0.6	2	23	514	536	513	536	0.97
4	6	1.3e-07	2.8e-05	25.9	2.9	2	23	740	761	739	761	0.97
5	6	9.4e-06	0.002	20.0	3.3	1	23	767	789	767	789	0.99
6	6	4.2e-05	0.009	18.0	0.4	1	22	797	818	797	818	0.97

Sequence Information

Coding Sequence: ATGATTTTTAGGCGAAAAGCGGAAACTTCGCAGGGGGGCAGTACGCCCGATACGGTACAATGTGGTGGCTGTAGGGCATCATTTCCATTGGGGGAAATTGTTCGATTTATCGAGCACAAAGTGAATCATTGTCGAAGTACACTTCAGGGATGTCACAGTCCACCACCGGCGGCAGCACCCGAGGATTCAGATCCAGAGGATGCGCTTGCCCTGAAAAGTTTGGATCAGGAGAAATTGAAATCAGTGCCGAGTATCTCGGCGCCAATTAATAAGCGTGTTAATAGAATTGAAAGTCCCCCAACGCCCCAAGGTTCTGGGCCCGATGCCGTTAGTCCCATTGAGCTCAGGGCCAGTGCCAGTTCCACCCCAAAGAGACGGACCGAAGTCTCCGAGGAGGAAAAGGAGGACGTACCCAAGAAACCAAAAACCGAATCTGTTGACGCCGACACCAATACCGTCAATTCCGAGCCAAAATGGTTGCAGTGTTCCCAATGTTCCCGACGTCTGTCTTCAGCATGGGAGATGTTGCAGCACGCACAAACTCTACATGGAGCCAGACTCTACACATCATCAACATCCCTAGCAAATTCCTCGTCAAACACACCGACCCCAAGTCCCACGACTCCAACGCCAACCCATTCTCATCACTTGAGTCCGCCAAATCATCTGAATATCAGCGGGAAATCAACAGGAAGTTCCTCGGCTGCAAATTCTTCGGGCGGTACCAACACAAGTGGCAGTAGCGGTGGTCGACAACAATTACAAACCTCAGCGACTCTAGTTGCCGATCCTCTCAGTTTTCTAAGACTTCACAGCACAACGCAACATCTAGACAGAAGTTATTCGCAACTATATCCACCCGATCTAATGGCCCACATGGTCGGCTATCGAGGACTTCAGGACCTACAAACAGCAACAAGAAATCTACAGAATTTAGGTGATCCCCTCCGAAGAATGGATGGACTAAACTTGGGCGACTCACAATTCAGAGGCTCTCTAGACACTCTGAATAATGCCCGAAATTTAGCGAATTTAGCAAATTTAGCCCAAAGTCGAGGGATCACTAGTCAGGGTCATCCACAAATTTTAGAATCGAACATGGATTTTTACTCGGAGCGTCTAAGGAACCTCGCTAATCCGGCCTTAGGCGCAGTGCCTCTTAATAATTCGGTAGCGAATCTTAATTCATCAGTGGTACCATCAACTGTTCCAACAGCTCATTCAGTCGAACCACCGAGTCCAGCTTCGTCAAATCCCACAAATCTCACTCACAATCATCAGAAAGAGAACTCACCACCTTGCTATACCCAAAGTCCCACCGGACATCACAATAACAACAATTCCACAGACAGTGAAAAAACAAGTCCTCCGGTTGCTTCAACACCCATCATCACCGACACGTCGGAAACTGTCTACAGTTGTGAGGCATGCGACAAGAAATTTCGCTTCCAGTCGAACCTCATCTCCCACCGGAAGAGTCATCAAGAGAAGGAGAGTCATCAATACCAGGAGACGGTAGCCAAAACAATTTCTCAGACGAGATGCGAAGTCTGCGAATTAGAGTTGTCTACTTACTCAGAACTGAGAAAACACATGAGAAAAGAGCACCAGGAGGCTCTGAATCCCCCTGCGAGTCCTCAAGGTAGTGTCGAAACTGTCCCCGACGATGGTAGTAGTTGTGACGAGAATATGGACCTCGACGATGGCGATGACAACGACAAGGATCAAGATGACGCTGAGGAAAACACACCCGAGGATCTAAGCACCACCCAAGGACAAAGTAGCGAAGAGAACGGTCCCCTCAATTCGGGGAGAATCGATCAAAAACCCAGTTTAGTAGGTGACTTTATCGAAAAATTCGGCCTCGGCAACTTGAGTCAATACTCCGAGGCCTATCGACAAGCGCTTCAAGAACCAGGTCTGAATCGTGGTTTCATCAAAACAGAATCGCCCGCTAGTCTCACAAACACCCTGAACAATAATAAAGAAAAGGACAGCGCTCTATCACCAACAAATTACAATTTAGGCTCAACGCCAAATATTTTCTCCGGATTTCACAGATCCACCGCACCGGAATTTGGAGGTCTTTGGATGACCGGTCATCACTATTTGGAGAACAGCGATATCCGAAAGACAACCAAAGCAACGACTTCTAGTCTCTCACTACAAGGACTTCCGAGTCCTCTACTAAAAAAAGAGCGCAGTGGGAGGAACGACACCTGTGAATACTGTGGGAAGGTCTTTAAAAATTGTTCAAATCTCACAGTTCACAGGAGGTCACACACAGGTGAGAAACCCTATAAATGTGAACTATGTTCCTACGCCTGTGCACAAAGTTCAAAACTCACGAGGCACATGAAGACGCACGGCAGGCACGGCAAGGACACGTACAAATGTCGATTCTGCGAGATGCCATTCTCAGTTCCCAGCACATTGGAGAAGCACATGCGAAAGTGCGTCGTTGTCGTTCAACAAGGCTCAAAAATGGGACTACCCTATCCGGGAAGTCAGGACGAGGATTCTTCACTAAGTACCAAGGATACTTGA
Protein Sequence: MIFRRKAETSQGGSTPDTVQCGGCRASFPLGEIVRFIEHKVNHCRSTLQGCHSPPPAAAPEDSDPEDALALKSLDQEKLKSVPSISAPINKRVNRIESPPTPQGSGPDAVSPIELRASASSTPKRRTEVSEEEKEDVPKKPKTESVDADTNTVNSEPKWLQCSQCSRRLSSAWEMLQHAQTLHGARLYTSSTSLANSSSNTPTPSPTTPTPTHSHHLSPPNHLNISGKSTGSSSAANSSGGTNTSGSSGGRQQLQTSATLVADPLSFLRLHSTTQHLDRSYSQLYPPDLMAHMVGYRGLQDLQTATRNLQNLGDPLRRMDGLNLGDSQFRGSLDTLNNARNLANLANLAQSRGITSQGHPQILESNMDFYSERLRNLANPALGAVPLNNSVANLNSSVVPSTVPTAHSVEPPSPASSNPTNLTHNHQKENSPPCYTQSPTGHHNNNNSTDSEKTSPPVASTPIITDTSETVYSCEACDKKFRFQSNLISHRKSHQEKESHQYQETVAKTISQTRCEVCELELSTYSELRKHMRKEHQEALNPPASPQGSVETVPDDGSSCDENMDLDDGDDNDKDQDDAEENTPEDLSTTQGQSSEENGPLNSGRIDQKPSLVGDFIEKFGLGNLSQYSEAYRQALQEPGLNRGFIKTESPASLTNTLNNNKEKDSALSPTNYNLGSTPNIFSGFHRSTAPEFGGLWMTGHHYLENSDIRKTTKATTSSLSLQGLPSPLLKKERSGRNDTCEYCGKVFKNCSNLTVHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRHGKDTYKCRFCEMPFSVPSTLEKHMRKCVVVVQQGSKMGLPYPGSQDEDSSLSTKDT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00881542;
90% Identity: iTF_00879989;
80% Identity: -