Basic Information

Gene Symbol
Zbtb41
Assembly
GCA_015476425.1
Location
JABAIE010000072.1:702858-707377[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 14 0.23 48 6.3 0.1 2 22 140 160 139 162 0.87
2 14 0.0091 1.9 10.6 0.6 2 23 167 189 166 189 0.94
3 14 0.2 42 6.4 0.8 1 23 324 346 324 346 0.95
4 14 0.00063 0.13 14.3 0.1 1 20 384 403 384 405 0.93
5 14 2.8e-05 0.0059 18.6 4.6 2 23 414 435 413 435 0.98
6 14 0.00085 0.18 13.9 0.6 1 23 448 470 448 470 0.98
7 14 3.3e-06 0.0007 21.5 1.1 1 23 478 501 478 501 0.98
8 14 2.3e-05 0.0048 18.8 3.0 1 23 507 529 507 529 0.96
9 14 0.0023 0.48 12.5 2.1 1 23 532 555 532 555 0.95
10 14 0.0035 0.74 11.9 1.8 1 23 574 596 574 596 0.96
11 14 1.2e-05 0.0026 19.7 0.6 1 23 602 624 602 624 0.98
12 14 1.3e-06 0.00027 22.7 0.8 1 23 629 651 629 651 0.97
13 14 1.4e-05 0.003 19.5 3.1 1 23 659 681 659 681 0.97
14 14 4.1e-05 0.0086 18.0 0.8 1 23 687 709 687 709 0.98

Sequence Information

Coding Sequence
ATGGATTATGCTCATAATTATTGTCTGCCTTATGGCTCGATTCAGAATCAATCAACAAAAGATTCTTCAAATAAACAGAATGTAAAAGAAATCTGTAGACTCTGTGGGGAAAAAAGTGAAAATTGTATACCTATTTTTGAAAATAAATTTTCAATTGCCGAAAAAATAAGTAGATGTCTGCCAATAGTGGTTCTTGTCAATGACAATTTACCACCTCAAATTTGTAAACGTTGTCTAACGTATTTAAATATTAGTTACAAATTAATTGTGAATTCCCTCAGAATTGATGAGCAACTTCGTAAACAATTGCAGGACAATAAAGAAGAGAATAAATTGAGTTGTTCAAAGGAAAAAAATGAAACTTCTTATACAGTGCCTTTGAAAAAATTAAAAAAGTCCGCAATTCTCGGTCCAGTGACCTGTGAATTTTGCGACATGATATTCACAGACGTCAATGAATTTGATGCACATTTCGAAGAGAATCATATTTTAAAATGGAAATGTAACTTTTGTGATTCAAGTTATGAAACATCGGAAGAATTAATCGATCATAAAACGAAACAACATTCGGGGAATATTATAATTTGTAAGACATGTGTTGACGAGGAGGACGCCGAGGAAAGACAATTGAAACAAGAAACAAAGGACAGGGACATATCTTCCGGTGAAGAATGTGAAGATAAATTTTATATCCCCCCTGAAATTGTTGCAAAAAACCCCATCCATATCGATTTACCGCAACCTAATCAATCACCAATTTCCGATTATTCCGACAATTTTAATTTAGACTCAGAAAACATTCCATTTATTGATGACGAAACAACTAATTTAAATGAAGAAAACGAGTCGAATGAAAAATCTCAGTCCAATGAAAAATCTCAGGCCAATGAAAAATCAAAACAATTACCATCGTCATCAATATCAAGTGCATTGCAAATAAATGAAAATATTGCAAGTAAAATTGAATTATTTCTCTGTGCTGTCTGCCATCTTCAAGTGAAGGATCCAAAACTTTTTGAACTTCATAAAAAAATTCATTTACCAAGAGTTATGATTTGCGTTCATTGTAAACATGAATCACAAACTATTTACGATCTCTATTTACATAAAAAGGAGGCTCACAATTTATATTCAAAAGTCAATCTAAAATATGTTTGCGAAATGTGCGGAAGATTCTTTTCCAGTAGTTGGGAATGGGAGGTGCATAAAACACGAAGATGCAGAAATCGAGAAGGAAATAAATGTAAATATTGCGAGGCCGCCTTCTCAACAAATCACAAACTCAAAAAACATTTAAGAAAACATAAACAAGAGATGTTCAGCGATCCAACTGTAAAAATTTTCAAATGTGTCTCGTGTCCGAAAATATTTGTCGACGAGGAATTTTACCAAAAACACAGAAATGTCCACGATCCAGAATGTTGGAATAATTTTAAATGCGAAATATGCAGTCGATCATTTCGTGATAATGTGAGACTAAAAGAACACATGAAATCAATTCACGAAGGAGTTAAACCACATACTTGTGATGTGTGTGGCAAATCTTTTCATCGTTTATCAAACATGAAAGCGCATCGTGCACTACATTTTGGTCACAAATGTCCTCATTGTGAGCAGAATTTCGAAAAAATACGACAATTGGTTACTCACATTCAGGAAGATCATGGTTTAGAACCGCCAGCAAATTTATTAACGAAAAAAGGATACGTGACTGGAACTTTTGTTTGTAAATTTTGTGGAAGAACTCTATCGACATATCAATCATTACTGGATCACGAACACATTCATACGGGAGAAAAACCATATCCCTGCGAGATTTGTGATAAAAGTTTTAGGAGTTACACAGCGCGTTGGTCACATATGCAAAGACATAAAGAAGGCAATTTTATATGCGAGCAGTGTGGAAAGTCTTTCAATTATAAGCAAAATTTGATGACTCATGTGCAAATTCACGTTTCTATGGAGGACAGAAAACATCCTTGTCCAACATGCAATAAAAGATTTTTACGAAAGGCGCATCTAAATGTACACATGCGAATTCATGAAGGAATTCGTCCTTATACGTGCGATATTTGCAATTTCAGTTTTACACAAGTTGGTGACATGAGGCGTCATCGAGCACGTCACGGGAATGGAGAAATTGTCAAACGACAACCACGAATTAGAGTCGAAAATTTGAAATACATTTCCGAATACAGCAATGAAGATACAAATTAA
Protein Sequence
MDYAHNYCLPYGSIQNQSTKDSSNKQNVKEICRLCGEKSENCIPIFENKFSIAEKISRCLPIVVLVNDNLPPQICKRCLTYLNISYKLIVNSLRIDEQLRKQLQDNKEENKLSCSKEKNETSYTVPLKKLKKSAILGPVTCEFCDMIFTDVNEFDAHFEENHILKWKCNFCDSSYETSEELIDHKTKQHSGNIIICKTCVDEEDAEERQLKQETKDRDISSGEECEDKFYIPPEIVAKNPIHIDLPQPNQSPISDYSDNFNLDSENIPFIDDETTNLNEENESNEKSQSNEKSQANEKSKQLPSSSISSALQINENIASKIELFLCAVCHLQVKDPKLFELHKKIHLPRVMICVHCKHESQTIYDLYLHKKEAHNLYSKVNLKYVCEMCGRFFSSSWEWEVHKTRRCRNREGNKCKYCEAAFSTNHKLKKHLRKHKQEMFSDPTVKIFKCVSCPKIFVDEEFYQKHRNVHDPECWNNFKCEICSRSFRDNVRLKEHMKSIHEGVKPHTCDVCGKSFHRLSNMKAHRALHFGHKCPHCEQNFEKIRQLVTHIQEDHGLEPPANLLTKKGYVTGTFVCKFCGRTLSTYQSLLDHEHIHTGEKPYPCEICDKSFRSYTARWSHMQRHKEGNFICEQCGKSFNYKQNLMTHVQIHVSMEDRKHPCPTCNKRFLRKAHLNVHMRIHEGIRPYTCDICNFSFTQVGDMRRHRARHGNGEIVKRQPRIRVENLKYISEYSNEDTN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00880687;
90% Identity
iTF_00883239;
80% Identity
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