Basic Information

Insect: Leptopilina heterotoma
Gene Symbol: -
Assembly: GCA_015476425.1
Location: JABAIE010000036.1:938365-945641[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.0043 0.9 11.7 0.5 2 23 218 239 217 239 0.96

2 16 0.00016 0.034 16.1 1.3 1 23 244 266 244 266 0.97

3 16 1.7e-05 0.0035 19.3 3.0 1 23 273 295 273 295 0.97

4 16 0.0024 0.5 12.5 5.8 1 23 301 323 301 324 0.95

5 16 0.003 0.63 12.2 2.8 3 23 330 350 329 350 0.98

6 16 0.00014 0.029 16.4 0.8 1 23 355 379 355 379 0.99

7 16 0.038 8.1 8.7 1.9 1 21 385 405 385 408 0.80

8 16 1.4e-05 0.0029 19.5 1.4 1 23 414 436 414 436 0.97

9 16 7e-05 0.015 17.3 0.6 1 23 442 464 442 464 0.97

10 16 0.00024 0.051 15.6 0.6 1 23 468 490 468 490 0.98

11 16 2.9e-07 6.1e-05 24.8 1.8 2 23 497 518 497 518 0.97

12 16 1.8e-05 0.0037 19.2 2.1 1 23 524 546 524 546 0.98

13 16 1.2e-05 0.0025 19.7 3.4 1 23 552 574 552 574 0.99

14 16 0.093 20 7.5 4.2 1 23 580 602 580 602 0.96

15 16 0.00013 0.027 16.5 1.4 2 23 608 629 608 629 0.98

16 16 0.0019 0.39 12.8 0.7 1 19 636 654 636 657 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.0043	0.9	11.7	0.5	2	23	218	239	217	239	0.96
2	16	0.00016	0.034	16.1	1.3	1	23	244	266	244	266	0.97
3	16	1.7e-05	0.0035	19.3	3.0	1	23	273	295	273	295	0.97
4	16	0.0024	0.5	12.5	5.8	1	23	301	323	301	324	0.95
5	16	0.003	0.63	12.2	2.8	3	23	330	350	329	350	0.98
6	16	0.00014	0.029	16.4	0.8	1	23	355	379	355	379	0.99
7	16	0.038	8.1	8.7	1.9	1	21	385	405	385	408	0.80
8	16	1.4e-05	0.0029	19.5	1.4	1	23	414	436	414	436	0.97
9	16	7e-05	0.015	17.3	0.6	1	23	442	464	442	464	0.97
10	16	0.00024	0.051	15.6	0.6	1	23	468	490	468	490	0.98
11	16	2.9e-07	6.1e-05	24.8	1.8	2	23	497	518	497	518	0.97
12	16	1.8e-05	0.0037	19.2	2.1	1	23	524	546	524	546	0.98
13	16	1.2e-05	0.0025	19.7	3.4	1	23	552	574	552	574	0.99
14	16	0.093	20	7.5	4.2	1	23	580	602	580	602	0.96
15	16	0.00013	0.027	16.5	1.4	2	23	608	629	608	629	0.98
16	16	0.0019	0.39	12.8	0.7	1	19	636	654	636	657	0.93

Sequence Information

Coding Sequence: ATGAAGAATGCCAAGATGTCGACCTGGGCAATTAATATACTCGACGTAAAGGGAAAAGTTTTAATTTCAAGAAAACGTGCGAAGGAGGGTAATTTAACGCCAATAATACAAAATCAAGATGATAATAATAATAATATAAAATTGAAAGCGAAACCAAAAGTTGAAAATGATCAAAAATCGCAAAATAAGACGGAAAATCGAGTGGATAAAAAATTGGAATCCGAATTATGCAATAATAAACGTCTTTATGTCACCTTAACGGATATTATGAAAATGAAAAATAATTCGAAGGAGAAAAGTGGCACCGATTGCCCATCACTTGAAAAATTTCTCTCTGATAATTTAAGAAAGGCACATTCATCTTTAAGATCGGTTCGATTAAAAAAATCATCGCTAAGAACAAAATTGAAAAATCGTCAAGAAATCTCAGTCACTAGGAATAATTTGTTAACAAAAAATTTTTCGTTGATGAAAGAAGATTCTTCAATTTTGCCGAAAAATTCTCCAAAATCGGGTAAAGCTTCTTCATCATTGTCTGATAATTACAATGGTGGTGTTGATGCAAAAAATTATGACGCTAAAGTTGCTTATACTGATGATGACATCAAAAAACTAGTAAATAAAGCAAAAATATCTGAAGCAAAAAAGTTGATATGTCCAAAATGTTCAAAACAAATAAAAGGACGAACAGGATTACAACGACATTTGTACACACATGGCAAGAAGAGGTACATTTGTTCAATTTGCAATAAACGTTTATCATCTAAATATTATTTACGACTTCATGAAGAGAAGCACAGAATTAAAGATCGACCATTCAAGTGTAATAAATGCGAAAAGTGTTACATTACAAACGCTGAATTAAAAAAGCACTTAGGATCACACACTGTTGAACGTAAATTTGTTTGTTACACTTGCAAGCATACATTTAGAACAAAAAGTGATATTAGTTCACATATGACAGTACATCATCCAATTAAGGTGGCATGCAAGATATGTAGTAAAGTAATGAATAGTAAACATTCACTTTATTATCATATGAAAACACATGAAATAAGTGCATACAAATGTACCATTCTGGGTTGTGGTCGAACTTTTATGCTAAAACAAGCACTAGAACATCATCTTATAACACATCAGAATCTCAAGGAGCACAAGTGTCCATATTGCGAGAAACGTTTTAATTTCACGAAAAGTAGAGATCAACATGTTGCACTTATACACACGAAGGAGGGACTGCATATTTGTCAATATTGTGATAAGGAATTTCCATTAAAATCATTATTGGCAACGCACTTGAGGAGACACACTGGTGACCGTCCATTTATTTGTCAGATTTGCAATAAAGGTTTCATCAGCATTACATACTTAAATTATCACATGAAATTGCATGAGGAAAAATTCACCTGTAACGAGTGCAATGGAAAGTTTATAAACAAATTTGCATTAAGGGGTCACTTGAAAATACACTTTCCACCTGTGAAAAATGTGTGTTCGTATTGTAAAAAGAGTTTTAAGAAACCATCAGCTCTTGCTCATCACATGCGAGTGCACACTAACGAAAGGCCATATCAATGTTATCTTTGCGACAAAACATACAAAGGCAAAACTGATCTCAAAACTCATATGTTTATTCACACCGATAACTTTCCTTTCAAATGCCACCTGTGCCCAAAAGGGTACTCTAAAAGAAGATCTTTAAAAGATCATATTAACACGCACACCGCTAAGAAACCATTTGCCTGTGTCATTTGTAATTTTACATTTCGATATTTGTCGTCATGCAAAAATCATTATCTGAGGCATAAAATTAATGTCAGAAAATGTGAAATTTGTGAATTATATTTTCGATCGAATGCCACATTTAAGAGGCATTTAAAAATGCACAAGAGATTACGGGGAAAATTTAATTGCACCACTTGTGAAAAGAGCTTTAGATTACAAAAAAAACTTATTGCACATTCTCAGCAACTGCTCGAAACAATGGGGAAATGTCCGAAAAAATGA
Protein Sequence: MKNAKMSTWAINILDVKGKVLISRKRAKEGNLTPIIQNQDDNNNNIKLKAKPKVENDQKSQNKTENRVDKKLESELCNNKRLYVTLTDIMKMKNNSKEKSGTDCPSLEKFLSDNLRKAHSSLRSVRLKKSSLRTKLKNRQEISVTRNNLLTKNFSLMKEDSSILPKNSPKSGKASSSLSDNYNGGVDAKNYDAKVAYTDDDIKKLVNKAKISEAKKLICPKCSKQIKGRTGLQRHLYTHGKKRYICSICNKRLSSKYYLRLHEEKHRIKDRPFKCNKCEKCYITNAELKKHLGSHTVERKFVCYTCKHTFRTKSDISSHMTVHHPIKVACKICSKVMNSKHSLYYHMKTHEISAYKCTILGCGRTFMLKQALEHHLITHQNLKEHKCPYCEKRFNFTKSRDQHVALIHTKEGLHICQYCDKEFPLKSLLATHLRRHTGDRPFICQICNKGFISITYLNYHMKLHEEKFTCNECNGKFINKFALRGHLKIHFPPVKNVCSYCKKSFKKPSALAHHMRVHTNERPYQCYLCDKTYKGKTDLKTHMFIHTDNFPFKCHLCPKGYSKRRSLKDHINTHTAKKPFACVICNFTFRYLSSCKNHYLRHKINVRKCEICELYFRSNATFKRHLKMHKRLRGKFNCTTCEKSFRLQKKLIAHSQQLLETMGKCPKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -