Lhet024543.1
Basic Information
- Insect
- Leptopilina heterotoma
- Gene Symbol
- ZNF236
- Assembly
- GCA_015476425.1
- Location
- JABAIE010000058.1:1832127-1865980[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 28 0.00033 0.07 15.2 4.5 2 23 185 206 184 206 0.96 2 28 4.4e-05 0.0093 17.9 0.6 1 23 212 234 212 234 0.98 3 28 2.8e-07 6e-05 24.8 0.7 2 23 240 261 240 261 0.98 4 28 0.0088 1.9 10.7 0.2 3 23 269 289 267 289 0.96 5 28 0.00013 0.027 16.5 2.9 2 23 300 321 300 321 0.98 6 28 5.7e-07 0.00012 23.9 2.1 1 23 342 364 342 364 0.99 7 28 8.5e-06 0.0018 20.2 3.2 1 23 370 392 370 392 0.98 8 28 8e-05 0.017 17.1 2.2 1 23 398 421 398 421 0.95 9 28 0.00079 0.17 14.0 4.1 1 23 430 453 430 453 0.98 10 28 2.2e-06 0.00046 22.0 0.9 1 23 558 580 558 580 0.98 11 28 0.00015 0.032 16.2 3.6 1 23 586 608 586 608 0.99 12 28 1.1e-06 0.00022 23.0 0.1 1 23 614 636 614 636 0.97 13 28 0.00036 0.077 15.1 5.3 1 21 640 660 640 662 0.95 14 28 0.00084 0.18 13.9 5.6 1 23 717 739 717 739 0.98 15 28 4.9e-05 0.01 17.8 5.4 1 23 745 767 745 767 0.99 16 28 0.00077 0.16 14.0 5.0 1 23 773 795 773 795 0.97 17 28 0.00013 0.027 16.5 7.2 1 23 801 823 801 823 0.98 18 28 4.5e-05 0.0096 17.9 0.7 1 23 1138 1160 1138 1160 0.95 19 28 0.0088 1.9 10.7 2.1 2 23 1183 1204 1182 1204 0.97 20 28 0.016 3.3 9.9 1.4 1 23 1210 1232 1210 1232 0.95 21 28 0.0027 0.56 12.3 0.2 1 23 1238 1260 1238 1260 0.97 22 28 3.6e-06 0.00076 21.4 1.3 3 23 1330 1350 1329 1350 0.94 23 28 0.023 4.8 9.4 5.4 1 23 1356 1378 1356 1378 0.98 24 28 0.0001 0.021 16.8 1.7 2 23 1385 1406 1384 1406 0.96 25 28 4.7e-05 0.0098 17.9 2.0 1 23 1412 1434 1412 1434 0.98 26 28 2.7e-06 0.00057 21.8 1.1 2 23 1652 1673 1652 1673 0.97 27 28 1.5e-05 0.0032 19.4 5.1 1 23 1679 1701 1679 1701 0.98 28 28 7.6e-06 0.0016 20.3 3.9 1 23 1707 1730 1707 1730 0.97
Sequence Information
- Coding Sequence
- ATGTTGACATCCCAGACAATTGTTACTAATTCAACAATGGACTCCATCCCGTTGAGTTTTATTATTTCCGATAATGGACAAACATTGCTGGCTGTATCAGATGTCGGAGATGGTACGATTGAATTGATGAATTCGCCAGTTACTTTCGTGAATGAAACCAACGACAATTCACATAGTTCAAAATCTAATCGGAATCTTTCACCAAATACGTCTGTTTTGCAAGTGTGTGTCGATGAATCTGGATTACGCTCTCAAGAATCAATATTGGTGCCTGCTCACATGATTTCCTTTATTTCAAACGATTCAACAGAGACAACAAAGGAGGATCAATCTCAAATTGCGTATCATATTTCTCAGTATCGAACCATTGAAGTAAGAACGGAAAAGTCTTCTGAAGATGAATCTCCAACGGTCCAAACTTCTTTACCAATACCAACGAAATCTACCTCTTTAGTGTCAAAGTCTTCCAATCATCAAAAATCTTCTTCACCCTCTAGACGAAAACCTGGCCGACCGAGAAAATACGAATGTTTTCTTAAAAATATCGATTTAAAGTGTGAAATTTGTGGTGAAGAATTTAAAAAGAAACATTTATATCGTAAACACATGGAGCATCATGCAGAGGAGAAACCACATCGTTGTCCAAAATGTCCTGCATCATTTAATGTCCCGACGAATTTTACTCTTCATATGGCAACTCACAACATTGGCGAGCCCAAATGTCCCGAGTGTGGAAAGAAATTCGCCCGAAAAGCGAGTTTAAAGTCTCATATGATGCTGCATGAGAAGGAGGAAAATCTCTTTTGCACTGAGTGTGAGGATGCCTTTTCTACCAAGGCTCAACTGGACGCTCATCTGAAACTTCACAACGAAAAATGGACGACCGAAGATGTCAGAAAGTGCAAACTCTGTCACAAGCAATTCACACAACCGGCTTTATACAGACAACATATCAGAGAACATTACAGGTTACAGACAAAACTTGTAAAGCAGACGAAGAGAGGAGCGAGACACAAAACAATGTACAAATGCAAAATTTGCTTCAAAACTTTTCAAAAACCTAGCCAATTAATGAGACATATTAGGGTTCACACAGGCGATAAACCATTTAAGTGTACGACTTGTAGCAGAAAATTTACTCAAAAGGGTTCACTGCAAATCCATATGAAACAACATGACGGACTTAAGCCACACGCTTGCCATTTTTGTAATGCTAAATTTAGTCAGAAAGGCAATCTAAACGCTCACATCGAACGGGTTCATAATCTTCCCGATAAAGATTCAATTTTTCGGTGCACTTATTGTACATGTGCTTTTAAAAAACTTGGCAGTTTGAATGCACACCTGAAAAGAAGACACGCTCTCCCCATTGATGAGGATGAGAATCCAAAATGTGATAGTTCAACGTCAGATGCTGATATGCAGGCAACTGTGGAAAATGTCATGTTACAGCTTGCTTCTCTGGAGTCGGAAGTGCAAAATCAAGCAGATTCAACTGCGAAAGATAATAACGATATTTTACAACAGGCGTTGCAGAACAGTGGACTACCAAAAATGGGTAAAAAGGCGAAAGGAAAAACGATGATGGTGACTTTATTGGATCGAACCGCCGATGGAGATGCGAGAAAATATGTGACAATCAAGCAACGACACGTGGGCGACATGTTGTGGTTCATTTGCACTTTCTGCCAAAAGGAATTTAAAAAACCTTCGGATCTCATAAGGCATTTACGTATTCATACACAAGAGAAGCCATTTAAGTGTTCACATTGCAGCCGCTCGTTCGCTTTAAAGTCGACAATGACCGCTCACGAGCGAACACATTCTGCTCTAAAGAAATTTCCTTGCGGAGTTTGCGATAAAGTATTTCCCACTCGAAGCAGTCTCACAGCACATACTAGGTTACATACCAGATCGTTTGCGTGCAACGTGTGCAGTAAATGTTTCAGTGGAAGTTCATTGTTAAAAAATCACATGAGATGTCATTCAAAACCGAAGACGAAATTATCGCCAGAAGCTGAGAGTCTCATTCCTCAAATAGTCTTAGAGGAGCCGTTGCTTATCAGTGATTCAGGGAATAAAATAAGCGTGGCTCAGATTAAATCGAAAAAGCAACAAGTTTATGAAGATGGCGATTCAGCAAGGCCTCATAAATGTACAATGTGCACTGCCGCCTTTCGAAAAATTAGTCATTTGAAACAACATCTTCGCAGGCACACTGGAGAGAAACCTTACAAGTGTACCAAATGTGATAGGAAATTTACTTCGAACAGCGTTTTGAAGACGCATTTGCACACTCACGAGGATTTGAGACCGCACAGTTGTTCCGTTTGCAATGCCAAATTTACAACGCATTCCAGCATGAAAAGACACCTCATTACGCATAGCAATAAAAGGCCTTTCATGTGTCCCTATTGTCACAAAACTTTTAAAACATCCGTTAATTGCAGAAAACACATGAAAATACACAAATCCGAATTGGCTCAACAGCAAGTTGAACAGCAAAAAATGCAACCAAAAGTCATAACAATTTTGGATCAAACAAAAAAAAGTGAGATGAATAAAGAAAATAAATTTTCCGTACCTGAAAGTCTTACTACTTTAGCAGATTCAATAACTGTTCCATTTGAATCGTCAACTGTTAATTTAACTGCGAATTTATCGAGTCAGTATGGAAATATTATAGAGGAAAGTAATCAAAAATCGACACCGATTTCTGTCGAACAAACTATTAATCAAAATCTTTTAAATGAAAATAGTGATAATTTGAGAGTCACTCAAACTTTACATGCCGATGAAACGGGTACGATAACATTGCCAAATTATTCAGGAGAACAGACACTCACAGCCGAAAGTATACGAGAAATTGAAGAGACATTGAATCAACAACTATTCGATATTGGAATGAATCTCGAAATTGAAAATTCAATATCTAAAGACCTTGCGGAAAAGAATTCTGTTTCGGGAAATCAACCTGTTCTCAATATTATTTACGATACAGAAAAAACATTGAACTCTGTCCCGAACAATATCAATACTAATATATTTACCCCACAGTTTGATACATTTGATATGAATCAAATTTCTTTACACAGCAATGAAGTTATAGATGTTGCAATAGATTCAGAAACGACAATTGAAAATATTTTACCGGAATCTGTTCGAGAGGAAGTTTTGTCGGTCCCGATGACAAACGAATCTATTGAAATTAATCAGTTGAAATGCTTGAATAGTAAAATTAATTCAATTCCATCTCACATGGGAATTTTAGCACCAGTGCCAGATGATAAAAAATACTCGAAAGTTATTGCTAAGGCTGATACAACTAATCAGACTGAAATTCAGTCACCTATGGATAAGCAAAATTCTGGGAAAAAATCATTAACGAATTATTCACGTTCTAAATACTATTTCCCATGTACAATATGTGATAAACAATATAAGAGAGAATCGGATTTGATGCATCATGTGGAGGGACACATGAATGACGCTGTGAAGAACTCTGTAATTAATGGAAGCAATTCTATCGAGATCACGCCATTATTGCAGTGTCATATGTGCAGTAAAAATGGTTTCACAGCCAATGATTTGAAGGAGCATTTAAAAACTCATCAGGGTTCAAAGGAATTCGAATGCATAGAATGTGCGCAAAAATTCTGCACAAACGGAGGTTTAAGCAGGCATTTAAAAATGCATGCAGCTAAGCAACAATACCAGTGTAACGAATGCCAGAAAGTATTACCGAATAAAGTACAAATGGATCTTCATATGTTGGATCATCAACCATTTTTCCGATTAGGAATAGTCGAGGCAGATAGTTCGGAAAAAGAAACTGTTTCCCTGTTGACCAATGAATTTCCACTTGATAAACCTCCAATAACTATAGATGCAAAATTGTCCGAGCAGATTTTACTTGATTCATCAGAAATTATGGAAAGACTCAAGAATATGGAGGATAAAGAAGAGAAGAAACCAGAAAAAAATAAATGTATATACTGTCCAAAAACTTTCCGAAAACCCAGTGATCTCACGAGGCATCTTCGAACTCACACCGGAGAAAAACCCTACAAATGTCCATTTTGCAATAAAAGTTTCGCAGTTAAATGCACTCTCGATTGTCATATGAAAATTCACAATGGACAGAAAACATTGAGTTGTCACGTGTGTAACAGTTTCTTCGCTACTAAAGGGAGTTTGAAAGTTCATATGAGACTTCACACTGGTTCGAAACCCTTCAAGTGTCCGATTTGCGACATGAGATTCCGAACTTCAGGGCACCGAAAAGTCCACTTATTGTCCCACGAGAAGGAGCACAAGGAAAATCAAACACGAAAACGAAAGCAACGAAAAACCGAGGCTATTGCGAGTGTTGTGGCCGACGTTGAAAATGCCATTGAAACAATAGCGAATGCAAAAGATGATTCCAATTCTCTGCAAGAGACGGAGGATCAATCGTCGAATATGGACACAGTGACAATAGACACATCCTCCCTGACAAATCAAATAATCTTCAATCCCGACGGAACTATTGTAAATAACAATTCCGTATTATCAGTCAGCGAGAGTAATCAACTTGTTGCTAATCTACATTTTCTCCTCGCCAATGGTCTTATTTCCATTCAACCCGACGGAATAATTGCCATTCAAGATTCCGTTCTTCCCAGTTTGGCAAATCTACAAGAAGACAATCCTCAGGATGTTACCGAGTCGAACGACTCCGAAAGTATTATTATCACTCAAGAGACGAATTCTCTAGATCTCGATCAATCGGGTCTGTTGAATATGGTCCTGGAAGTTGGAGAAAATAATTTCAATTCTATTGCGAATTCTATTTCCAATCCAAATGCTTTGAATTTTAATATTCCGAATTATGGTATCAATGGCAGTGTCACGAATTCGGGGAAAATCGAGAGCAGTGGACGAAGAAGATCGAGAAATGGACCAATGCGAAGGGAGTGTGAATATTGTGGGAAGACTTTTATAAAACGAAATCAATTGGAGAGACACAAGCGAATTCACACGGGCGACAAACCTTTTAAATGTGAACTTTGTGATAAATCATTTACACAAAAGAACACTCTTCAAATGCATCAGAAGCATCACACCGGTGATCGACCATTTCACTGTTCATATTGTACATACACTTTTTCGCAAAAGGGAAATTTGCAAACGCACATTAAACGAGCTCATCAAGTGAATTTACTCGAGGAGAAGAAACTTTGGAAAGATCCAACGTCGAAATTAGTTCAGGAAAGTATTGTCGACACGAGTCTCGACGACATTTCTTTCGTTGATTATTTATCTTAA
- Protein Sequence
- MLTSQTIVTNSTMDSIPLSFIISDNGQTLLAVSDVGDGTIELMNSPVTFVNETNDNSHSSKSNRNLSPNTSVLQVCVDESGLRSQESILVPAHMISFISNDSTETTKEDQSQIAYHISQYRTIEVRTEKSSEDESPTVQTSLPIPTKSTSLVSKSSNHQKSSSPSRRKPGRPRKYECFLKNIDLKCEICGEEFKKKHLYRKHMEHHAEEKPHRCPKCPASFNVPTNFTLHMATHNIGEPKCPECGKKFARKASLKSHMMLHEKEENLFCTECEDAFSTKAQLDAHLKLHNEKWTTEDVRKCKLCHKQFTQPALYRQHIREHYRLQTKLVKQTKRGARHKTMYKCKICFKTFQKPSQLMRHIRVHTGDKPFKCTTCSRKFTQKGSLQIHMKQHDGLKPHACHFCNAKFSQKGNLNAHIERVHNLPDKDSIFRCTYCTCAFKKLGSLNAHLKRRHALPIDEDENPKCDSSTSDADMQATVENVMLQLASLESEVQNQADSTAKDNNDILQQALQNSGLPKMGKKAKGKTMMVTLLDRTADGDARKYVTIKQRHVGDMLWFICTFCQKEFKKPSDLIRHLRIHTQEKPFKCSHCSRSFALKSTMTAHERTHSALKKFPCGVCDKVFPTRSSLTAHTRLHTRSFACNVCSKCFSGSSLLKNHMRCHSKPKTKLSPEAESLIPQIVLEEPLLISDSGNKISVAQIKSKKQQVYEDGDSARPHKCTMCTAAFRKISHLKQHLRRHTGEKPYKCTKCDRKFTSNSVLKTHLHTHEDLRPHSCSVCNAKFTTHSSMKRHLITHSNKRPFMCPYCHKTFKTSVNCRKHMKIHKSELAQQQVEQQKMQPKVITILDQTKKSEMNKENKFSVPESLTTLADSITVPFESSTVNLTANLSSQYGNIIEESNQKSTPISVEQTINQNLLNENSDNLRVTQTLHADETGTITLPNYSGEQTLTAESIREIEETLNQQLFDIGMNLEIENSISKDLAEKNSVSGNQPVLNIIYDTEKTLNSVPNNINTNIFTPQFDTFDMNQISLHSNEVIDVAIDSETTIENILPESVREEVLSVPMTNESIEINQLKCLNSKINSIPSHMGILAPVPDDKKYSKVIAKADTTNQTEIQSPMDKQNSGKKSLTNYSRSKYYFPCTICDKQYKRESDLMHHVEGHMNDAVKNSVINGSNSIEITPLLQCHMCSKNGFTANDLKEHLKTHQGSKEFECIECAQKFCTNGGLSRHLKMHAAKQQYQCNECQKVLPNKVQMDLHMLDHQPFFRLGIVEADSSEKETVSLLTNEFPLDKPPITIDAKLSEQILLDSSEIMERLKNMEDKEEKKPEKNKCIYCPKTFRKPSDLTRHLRTHTGEKPYKCPFCNKSFAVKCTLDCHMKIHNGQKTLSCHVCNSFFATKGSLKVHMRLHTGSKPFKCPICDMRFRTSGHRKVHLLSHEKEHKENQTRKRKQRKTEAIASVVADVENAIETIANAKDDSNSLQETEDQSSNMDTVTIDTSSLTNQIIFNPDGTIVNNNSVLSVSESNQLVANLHFLLANGLISIQPDGIIAIQDSVLPSLANLQEDNPQDVTESNDSESIIITQETNSLDLDQSGLLNMVLEVGENNFNSIANSISNPNALNFNIPNYGINGSVTNSGKIESSGRRRSRNGPMRRECEYCGKTFIKRNQLERHKRIHTGDKPFKCELCDKSFTQKNTLQMHQKHHTGDRPFHCSYCTYTFSQKGNLQTHIKRAHQVNLLEEKKLWKDPTSKLVQESIVDTSLDDISFVDYLS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00883224;
- 90% Identity
- iTF_00883224;
- 80% Identity
- -